RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CYP4F30PQ9H0H9 118 aa5.88□□□□□ -1.47
VMP1-207ENST00000588131 PCP4P48539 62 aa5.87□□□□□ -1.47
VMP1-207ENST00000588131 KLKP1Q107X0 134 aa5.86□□□□□ -1.47
VMP1-207ENST00000588131 CYSTM1Q9H1C7 97 aa5.86□□□□□ -1.47
VMP1-207ENST00000588131 LCE5AQ5TCM9 118 aa5.84□□□□□ -1.47
VMP1-207ENST00000588131 HRES1P13985 223 aa5.82□□□□□ -1.48
VMP1-207ENST00000588131 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
VMP1-207ENST00000588131 H7BZZ5 65 aa5.78□□□□□ -1.48
VMP1-207ENST00000588131 C4orf26Q17RF5 130 aa5.77□□□□□ -1.49
VMP1-207ENST00000588131 NDUFC1O43677 76 aa5.76□□□□□ -1.49
VMP1-207ENST00000588131 MPLKIPQ8TAP9 179 aa5.76□□□□□ -1.49
VMP1-207ENST00000588131 COX6B2Q6YFQ2 88 aa5.72□□□□□ -1.49
VMP1-207ENST00000588131 MUC2Q02817 5179 aa5.71□□□□□ -1.49
VMP1-207ENST00000588131 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
VMP1-207ENST00000588131 FAT4Q6V0I7 4981 aa5.71□□□□□ -1.5
VMP1-207ENST00000588131 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
VMP1-207ENST00000588131 SPANXA2-OT1Q8N9U9 137 aa5.7□□□□□ -1.5
VMP1-207ENST00000588131 RBM12B-AS1Q9P1G2 102 aa5.69□□□□□ -1.5
VMP1-207ENST00000588131 DMAC1Q96GE9 116 aa5.67□□□□□ -1.5
VMP1-207ENST00000588131 FAM236DA0A1B0GTK5 79 aa5.66□□□□□ -1.5
VMP1-207ENST00000588131 FAM236CP0DP71 79 aa5.66□□□□□ -1.5
VMP1-207ENST00000588131 TMEM258P61165 79 aa5.66□□□□□ -1.5
VMP1-207ENST00000588131 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
VMP1-207ENST00000588131 A8MUN3 132 aa5.63□□□□□ -1.51
VMP1-207ENST00000588131 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
VMP1-207ENST00000588131 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
VMP1-207ENST00000588131 ATP5EP56381 51 aaPredicted RBP5.6□□□□□ -1.51
VMP1-207ENST00000588131 ACYP2P14621 99 aa5.59□□□□□ -1.51
VMP1-207ENST00000588131 COA5Q86WW8 74 aa5.55□□□□□ -1.52
VMP1-207ENST00000588131 S4R3F8 94 aa5.54□□□□□ -1.52
VMP1-207ENST00000588131 LCA10Q71F78 164 aa5.53□□□□□ -1.52
VMP1-207ENST00000588131 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
VMP1-207ENST00000588131 MT1HP80294 61 aa5.51□□□□□ -1.53
VMP1-207ENST00000588131 CHKB-CPT1BH3BT56 60 aa5.5□□□□□ -1.53
VMP1-207ENST00000588131 SERP1Q9Y6X1 66 aa5.49□□□□□ -1.53
VMP1-207ENST00000588131 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
VMP1-207ENST00000588131 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
VMP1-207ENST00000588131 CSAG1Q6PB30 78 aa5.42□□□□□ -1.54
VMP1-207ENST00000588131 M0R2T5 61 aa5.41□□□□□ -1.54
VMP1-207ENST00000588131 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
VMP1-207ENST00000588131 SPTSSBQ8NFR3 76 aa5.4□□□□□ -1.54
VMP1-207ENST00000588131 RPS28P62857 69 aaKnown RBP5.39□□□□□ -1.55
VMP1-207ENST00000588131 KRTAP10-6P60371 365 aaPredicted RBP5.33□□□□□ -1.56
VMP1-207ENST00000588131 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
VMP1-207ENST00000588131 H0YAA0 97 aa5.29□□□□□ -1.56
VMP1-207ENST00000588131 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
VMP1-207ENST00000588131 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
VMP1-207ENST00000588131 MT2AP02795 61 aa5.26□□□□□ -1.57
VMP1-207ENST00000588131 P0C880 135 aa5.25□□□□□ -1.57
VMP1-207ENST00000588131 Q1T7F1 81 aa5.25□□□□□ -1.57
VMP1-207ENST00000588131 A0A1B0GU69 56 aa5.24□□□□□ -1.57
VMP1-207ENST00000588131 MT1FP04733 61 aa5.23□□□□□ -1.57
VMP1-207ENST00000588131 SEC61GP60059 68 aa5.22□□□□□ -1.57
VMP1-207ENST00000588131 PRR15LQ9BU68 103 aa5.22□□□□□ -1.57
VMP1-207ENST00000588131 V9GYY9 64 aa5.22□□□□□ -1.57
VMP1-207ENST00000588131 PSPHP1O15172 72 aa5.18□□□□□ -1.58
VMP1-207ENST00000588131 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
VMP1-207ENST00000588131 Q5VV11 94 aa5.14□□□□□ -1.59
VMP1-207ENST00000588131 A0A1B0GU33 70 aa5.12□□□□□ -1.59
VMP1-207ENST00000588131 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
VMP1-207ENST00000588131 CRIPTQ9P021 101 aa5.1□□□□□ -1.59
VMP1-207ENST00000588131 M0QZ58 72 aa5.09□□□□□ -1.59
VMP1-207ENST00000588131 R4GN34 69 aa5.08□□□□□ -1.6
VMP1-207ENST00000588131 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
VMP1-207ENST00000588131 SPRR2GQ9BYE4 73 aa5.06□□□□□ -1.6
VMP1-207ENST00000588131 UQCR11O14957 56 aa5.03□□□□□ -1.6
VMP1-207ENST00000588131 A6NED7 52 aa5.01□□□□□ -1.61
VMP1-207ENST00000588131 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
VMP1-207ENST00000588131 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
VMP1-207ENST00000588131 LINC01554Q52M75 96 aa5□□□□□ -1.61
VMP1-207ENST00000588131 A8MU10 97 aa4.99□□□□□ -1.61
VMP1-207ENST00000588131 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
VMP1-207ENST00000588131 A0A0D9SG42 100 aa4.98□□□□□ -1.61
VMP1-207ENST00000588131 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
VMP1-207ENST00000588131 MT1BP07438 61 aa4.92□□□□□ -1.62
VMP1-207ENST00000588131 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
VMP1-207ENST00000588131 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
VMP1-207ENST00000588131 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
VMP1-207ENST00000588131 USH2AO75445 5202 aa4.88□□□□□ -1.63
VMP1-207ENST00000588131 A6NN06 94 aa4.88□□□□□ -1.63
VMP1-207ENST00000588131 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
VMP1-207ENST00000588131 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
VMP1-207ENST00000588131 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
VMP1-207ENST00000588131 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
VMP1-207ENST00000588131 PLAC4Q8WY50 150 aa4.84□□□□□ -1.63
VMP1-207ENST00000588131 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
VMP1-207ENST00000588131 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
VMP1-207ENST00000588131 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
VMP1-207ENST00000588131 MACF1Q9UPN3 7388 aaKnown RBP4.74□□□□□ -1.65
VMP1-207ENST00000588131 K7ERS5 55 aa4.74□□□□□ -1.65
VMP1-207ENST00000588131 MT1XP80297 61 aa4.72□□□□□ -1.65
VMP1-207ENST00000588131 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
VMP1-207ENST00000588131 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
VMP1-207ENST00000588131 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
VMP1-207ENST00000588131 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
VMP1-207ENST00000588131 PRO2289Q9P1D8 64 aa4.63□□□□□ -1.67
VMP1-207ENST00000588131 NEBP20929 6669 aa4.57□□□□□ -1.68
VMP1-207ENST00000588131 ROMO1P60602 79 aa4.56□□□□□ -1.68
VMP1-207ENST00000588131 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
VMP1-207ENST00000588131 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms