RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 LCE2AQ5TA79 106 aaPredicted RBP6.89□□□□□ -1.31
CCDC130-208ENST00000588071 FLGP20930 4061 aaPredicted RBP6.88□□□□□ -1.31
CCDC130-208ENST00000588071 LCA10Q71F78 164 aa6.86□□□□□ -1.31
CCDC130-208ENST00000588071 CSAG1Q6PB30 78 aa6.82□□□□□ -1.32
CCDC130-208ENST00000588071 CHKB-CPT1BH3BT56 60 aa6.79□□□□□ -1.32
CCDC130-208ENST00000588071 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
CCDC130-208ENST00000588071 KRTAP10-6P60371 365 aaPredicted RBP6.77□□□□□ -1.33
CCDC130-208ENST00000588071 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
CCDC130-208ENST00000588071 TMEM258P61165 79 aa6.76□□□□□ -1.33
CCDC130-208ENST00000588071 LORP23490 312 aaPredicted RBP6.73□□□□□ -1.33
CCDC130-208ENST00000588071 COA5Q86WW8 74 aa6.73□□□□□ -1.33
CCDC130-208ENST00000588071 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
CCDC130-208ENST00000588071 KRTAP9-8Q9BYQ0 159 aa6.66□□□□□ -1.34
CCDC130-208ENST00000588071 MT2AP02795 61 aa6.62□□□□□ -1.35
CCDC130-208ENST00000588071 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
CCDC130-208ENST00000588071 H0YAA0 97 aa6.58□□□□□ -1.36
CCDC130-208ENST00000588071 ADM2Q7Z4H4 148 aa6.58□□□□□ -1.36
CCDC130-208ENST00000588071 MT1FP04733 61 aa6.57□□□□□ -1.36
CCDC130-208ENST00000588071 SERP1Q9Y6X1 66 aa6.55□□□□□ -1.36
CCDC130-208ENST00000588071 SEC61GP60059 68 aa6.49□□□□□ -1.37
CCDC130-208ENST00000588071 P0C880 135 aa6.46□□□□□ -1.38
CCDC130-208ENST00000588071 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.38
CCDC130-208ENST00000588071 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
CCDC130-208ENST00000588071 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
CCDC130-208ENST00000588071 LCE2DQ5TA82 110 aaPredicted RBP6.42□□□□□ -1.38
CCDC130-208ENST00000588071 A0A1B0GU69 56 aa6.4□□□□□ -1.38
CCDC130-208ENST00000588071 RPS28P62857 69 aaKnown RBP6.39□□□□□ -1.39
CCDC130-208ENST00000588071 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
CCDC130-208ENST00000588071 R4GN34 69 aa6.37□□□□□ -1.39
CCDC130-208ENST00000588071 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
CCDC130-208ENST00000588071 SMIM26A0A096LP01 95 aa6.34□□□□□ -1.39
CCDC130-208ENST00000588071 M0QZ58 72 aa6.34□□□□□ -1.39
CCDC130-208ENST00000588071 KRTAP9-2Q9BYQ4 174 aa6.34□□□□□ -1.39
CCDC130-208ENST00000588071 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
CCDC130-208ENST00000588071 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
CCDC130-208ENST00000588071 V9GYY9 64 aa6.32□□□□□ -1.4
CCDC130-208ENST00000588071 A0A1B0GU33 70 aa6.3□□□□□ -1.4
CCDC130-208ENST00000588071 LCE2BO14633 110 aa6.3□□□□□ -1.4
CCDC130-208ENST00000588071 Q1T7F1 81 aa6.28□□□□□ -1.4
CCDC130-208ENST00000588071 LINC01554Q52M75 96 aa6.25□□□□□ -1.41
CCDC130-208ENST00000588071 Q5VV11 94 aa6.22□□□□□ -1.41
CCDC130-208ENST00000588071 PSPHP1O15172 72 aa6.21□□□□□ -1.42
CCDC130-208ENST00000588071 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
CCDC130-208ENST00000588071 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
CCDC130-208ENST00000588071 SPATA8Q6RVD6 105 aa6.2□□□□□ -1.42
CCDC130-208ENST00000588071 KRTAP9-6A0A140TA67 174 aa6.15□□□□□ -1.42
CCDC130-208ENST00000588071 UQCR11O14957 56 aa6.14□□□□□ -1.43
CCDC130-208ENST00000588071 MT1BP07438 61 aa6.14□□□□□ -1.43
CCDC130-208ENST00000588071 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
CCDC130-208ENST00000588071 A0A0D9SG42 100 aa6.13□□□□□ -1.43
CCDC130-208ENST00000588071 A6NN06 94 aa6.07□□□□□ -1.44
CCDC130-208ENST00000588071 CRCT1Q9UGL9 99 aa6.07□□□□□ -1.44
CCDC130-208ENST00000588071 A8MU10 97 aa6.05□□□□□ -1.44
CCDC130-208ENST00000588071 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
CCDC130-208ENST00000588071 A6NED7 52 aa6.04□□□□□ -1.44
CCDC130-208ENST00000588071 USH2AO75445 5202 aa6.03□□□□□ -1.44
CCDC130-208ENST00000588071 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
CCDC130-208ENST00000588071 FSIP2Q5CZC0 6907 aa6□□□□□ -1.45
CCDC130-208ENST00000588071 KRTAP19-6Q3LI70 58 aa6□□□□□ -1.45
CCDC130-208ENST00000588071 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
CCDC130-208ENST00000588071 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
CCDC130-208ENST00000588071 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
CCDC130-208ENST00000588071 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
CCDC130-208ENST00000588071 PRO2289Q9P1D8 64 aa5.93□□□□□ -1.46
CCDC130-208ENST00000588071 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
CCDC130-208ENST00000588071 MT1XP80297 61 aa5.88□□□□□ -1.47
CCDC130-208ENST00000588071 K7ERS5 55 aa5.87□□□□□ -1.47
CCDC130-208ENST00000588071 SSPOA2VEC9 5147 aa5.86□□□□□ -1.47
CCDC130-208ENST00000588071 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
CCDC130-208ENST00000588071 BRK1Q8WUW1 75 aa5.73□□□□□ -1.49
CCDC130-208ENST00000588071 FCGBPQ9Y6R7 5405 aaPredicted RBP5.71□□□□□ -1.5
CCDC130-208ENST00000588071 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
CCDC130-208ENST00000588071 KRTAP10-7P60409 375 aaPredicted RBP5.64□□□□□ -1.51
CCDC130-208ENST00000588071 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
CCDC130-208ENST00000588071 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
CCDC130-208ENST00000588071 TNP1P09430 55 aa5.6□□□□□ -1.51
CCDC130-208ENST00000588071 KRTAP10-12P60413 245 aa5.59□□□□□ -1.51
CCDC130-208ENST00000588071 ROMO1P60602 79 aa5.54□□□□□ -1.52
CCDC130-208ENST00000588071 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
CCDC130-208ENST00000588071 MACF1Q9UPN3 7388 aaKnown RBP5.5□□□□□ -1.53
CCDC130-208ENST00000588071 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
CCDC130-208ENST00000588071 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
CCDC130-208ENST00000588071 KRTAP25-1Q3LHN0 102 aa5.49□□□□□ -1.53
CCDC130-208ENST00000588071 KRTAP8-1Q8IUC2 63 aa5.47□□□□□ -1.53
CCDC130-208ENST00000588071 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
CCDC130-208ENST00000588071 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
CCDC130-208ENST00000588071 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
CCDC130-208ENST00000588071 KMT2DO14686 5537 aa5.38□□□□□ -1.55
CCDC130-208ENST00000588071 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
CCDC130-208ENST00000588071 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
CCDC130-208ENST00000588071 H3BS24 57 aa5.33□□□□□ -1.56
CCDC130-208ENST00000588071 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
CCDC130-208ENST00000588071 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
CCDC130-208ENST00000588071 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
CCDC130-208ENST00000588071 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
CCDC130-208ENST00000588071 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
CCDC130-208ENST00000588071 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
CCDC130-208ENST00000588071 MT1EP04732 61 aa5.18□□□□□ -1.58
CCDC130-208ENST00000588071 SPRR2EP22531 72 aa5.15□□□□□ -1.59
CCDC130-208ENST00000588071 SPRR2BP35325 72 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms