RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
VAT1-204ENST00000587147 USH2AO75445 5202 aa7.85□□□□□ -1.15
VAT1-204ENST00000587147 TRAV7A0A075B6U4 112 aa7.85□□□□□ -1.15
VAT1-204ENST00000587147 FAM236AA0A1B0GUQ0 79 aa7.85□□□□□ -1.15
VAT1-204ENST00000587147 FAM236BA0A1B0GV22 79 aa7.85□□□□□ -1.15
VAT1-204ENST00000587147 NDUFC1O43677 76 aa7.81□□□□□ -1.16
VAT1-204ENST00000587147 DMAC1Q96GE9 116 aa7.76□□□□□ -1.17
VAT1-204ENST00000587147 H0YAA0 97 aa7.75□□□□□ -1.17
VAT1-204ENST00000587147 SSPOA2VEC9 5147 aa7.71□□□□□ -1.18
VAT1-204ENST00000587147 CRIPTQ9P021 101 aa7.7□□□□□ -1.18
VAT1-204ENST00000587147 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
VAT1-204ENST00000587147 SERP2Q8N6R1 65 aa7.67□□□□□ -1.18
VAT1-204ENST00000587147 SPRR2GQ9BYE4 73 aa7.67□□□□□ -1.18
VAT1-204ENST00000587147 KRTAP19-6Q3LI70 58 aa7.64□□□□□ -1.19
VAT1-204ENST00000587147 ACYP2P14621 99 aa7.62□□□□□ -1.19
VAT1-204ENST00000587147 KRTAP19-8Q3LI54 63 aa7.58□□□□□ -1.2
VAT1-204ENST00000587147 SPANXA2-OT1Q8N9U9 137 aa7.58□□□□□ -1.2
VAT1-204ENST00000587147 SNURFQ9Y675 71 aa7.57□□□□□ -1.2
VAT1-204ENST00000587147 C20orf197Q8N268 126 aa7.56□□□□□ -1.2
VAT1-204ENST00000587147 FCGBPQ9Y6R7 5405 aaPredicted RBP7.54□□□□□ -1.2
VAT1-204ENST00000587147 Q5VV11 94 aa7.54□□□□□ -1.2
VAT1-204ENST00000587147 ADM2Q7Z4H4 148 aa7.54□□□□□ -1.2
VAT1-204ENST00000587147 SPTSSBQ8NFR3 76 aa7.53□□□□□ -1.2
VAT1-204ENST00000587147 MT1BP07438 61 aa7.49□□□□□ -1.21
VAT1-204ENST00000587147 COX7CP15954 63 aa7.48□□□□□ -1.21
VAT1-204ENST00000587147 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
VAT1-204ENST00000587147 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
VAT1-204ENST00000587147 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
VAT1-204ENST00000587147 R4GN34 69 aa7.39□□□□□ -1.23
VAT1-204ENST00000587147 P0C880 135 aa7.38□□□□□ -1.23
VAT1-204ENST00000587147 A6NN06 94 aa7.34□□□□□ -1.23
VAT1-204ENST00000587147 H7BZZ5 65 aa7.31□□□□□ -1.24
VAT1-204ENST00000587147 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
VAT1-204ENST00000587147 ANAPC13Q9BS18 74 aa7.31□□□□□ -1.24
VAT1-204ENST00000587147 KRTAP9-7A8MTY7 169 aa7.3□□□□□ -1.24
VAT1-204ENST00000587147 M0QZ58 72 aa7.3□□□□□ -1.24
VAT1-204ENST00000587147 COA5Q86WW8 74 aa7.27□□□□□ -1.25
VAT1-204ENST00000587147 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
VAT1-204ENST00000587147 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
VAT1-204ENST00000587147 CYSTM1Q9H1C7 97 aa7.23□□□□□ -1.25
VAT1-204ENST00000587147 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
VAT1-204ENST00000587147 SYNE2Q8WXH0 6885 aaKnown RBP7.14□□□□□ -1.27
VAT1-204ENST00000587147 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
VAT1-204ENST00000587147 CCDC179H3BU77 68 aa7.11□□□□□ -1.27
VAT1-204ENST00000587147 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
VAT1-204ENST00000587147 SEC61GP60059 68 aa7.11□□□□□ -1.27
VAT1-204ENST00000587147 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
VAT1-204ENST00000587147 MT1XP80297 61 aa7.09□□□□□ -1.27
VAT1-204ENST00000587147 SERP1Q9Y6X1 66 aa7.08□□□□□ -1.28
VAT1-204ENST00000587147 KRTAP13-4Q3LI77 160 aa6.98□□□□□ -1.29
VAT1-204ENST00000587147 KRTAP12-2P59991 146 aa6.96□□□□□ -1.3
VAT1-204ENST00000587147 TMEM258P61165 79 aa6.96□□□□□ -1.3
VAT1-204ENST00000587147 A0A1B0GU33 70 aa6.93□□□□□ -1.3
VAT1-204ENST00000587147 A0A1B0GU69 56 aa6.91□□□□□ -1.3
VAT1-204ENST00000587147 KRTAP5-9P26371 169 aa6.9□□□□□ -1.3
VAT1-204ENST00000587147 PRR15LQ9BU68 103 aa6.83□□□□□ -1.32
VAT1-204ENST00000587147 SPATA8Q6RVD6 105 aa6.82□□□□□ -1.32
VAT1-204ENST00000587147 CAMK2N1Q7Z7J9 78 aa6.81□□□□□ -1.32
VAT1-204ENST00000587147 SMIM26A0A096LP01 95 aa6.78□□□□□ -1.32
VAT1-204ENST00000587147 KRTAP10-12P60413 245 aa6.78□□□□□ -1.32
VAT1-204ENST00000587147 LINC01558Q9Y6Z2 57 aa6.78□□□□□ -1.32
VAT1-204ENST00000587147 A0A0D9SG42 100 aa6.77□□□□□ -1.33
VAT1-204ENST00000587147 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
VAT1-204ENST00000587147 KRTAP10-7P60409 375 aaPredicted RBP6.73□□□□□ -1.33
VAT1-204ENST00000587147 KMT2DO14686 5537 aa6.73□□□□□ -1.33
VAT1-204ENST00000587147 NEBP20929 6669 aa6.72□□□□□ -1.33
VAT1-204ENST00000587147 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.34
VAT1-204ENST00000587147 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
VAT1-204ENST00000587147 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
VAT1-204ENST00000587147 SPRR2FQ96RM1 72 aa6.67□□□□□ -1.34
VAT1-204ENST00000587147 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
VAT1-204ENST00000587147 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
VAT1-204ENST00000587147 MDN1Q9NU22 5596 aa6.6□□□□□ -1.35
VAT1-204ENST00000587147 UQCR11O14957 56 aa6.6□□□□□ -1.35
VAT1-204ENST00000587147 A8MU10 97 aa6.59□□□□□ -1.35
VAT1-204ENST00000587147 V9GYY9 64 aa6.59□□□□□ -1.35
VAT1-204ENST00000587147 SPRR2EP22531 72 aa6.51□□□□□ -1.37
VAT1-204ENST00000587147 SPRR2BP35325 72 aa6.51□□□□□ -1.37
VAT1-204ENST00000587147 SPRR2AP35326 72 aa6.51□□□□□ -1.37
VAT1-204ENST00000587147 Q1T7F1 81 aa6.51□□□□□ -1.37
VAT1-204ENST00000587147 LCE1AQ5T7P2 110 aa6.48□□□□□ -1.37
VAT1-204ENST00000587147 PCP4P48539 62 aa6.44□□□□□ -1.38
VAT1-204ENST00000587147 MIR22HGQ0VDD5 57 aa6.43□□□□□ -1.38
VAT1-204ENST00000587147 KRTAP20-1Q3LI63 56 aa6.43□□□□□ -1.38
VAT1-204ENST00000587147 RPS28P62857 69 aaKnown RBP6.41□□□□□ -1.38
VAT1-204ENST00000587147 PSPHP1O15172 72 aa6.37□□□□□ -1.39
VAT1-204ENST00000587147 TNP1P09430 55 aa6.37□□□□□ -1.39
VAT1-204ENST00000587147 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
VAT1-204ENST00000587147 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
VAT1-204ENST00000587147 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
VAT1-204ENST00000587147 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
VAT1-204ENST00000587147 K7ERS5 55 aa6.32□□□□□ -1.4
VAT1-204ENST00000587147 SPRR2DP22532 72 aa6.31□□□□□ -1.4
VAT1-204ENST00000587147 MT1EP04732 61 aa6.28□□□□□ -1.4
VAT1-204ENST00000587147 A6NED7 52 aa6.22□□□□□ -1.41
VAT1-204ENST00000587147 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
VAT1-204ENST00000587147 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
VAT1-204ENST00000587147 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
VAT1-204ENST00000587147 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
VAT1-204ENST00000587147 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms