RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 MUC2Q02817 5179 aa9.67□□□□□ -0.86
RETREG3-205ENST00000586870 MUC17Q685J3 4493 aa9.65□□□□□ -0.86
RETREG3-205ENST00000586870 COX6B2Q6YFQ2 88 aa9.6□□□□□ -0.87
RETREG3-205ENST00000586870 KRTAP3-1Q9BYR8 98 aa9.6□□□□□ -0.87
RETREG3-205ENST00000586870 BRK1Q8WUW1 75 aa9.59□□□□□ -0.87
RETREG3-205ENST00000586870 SPTSSBQ8NFR3 76 aa9.56□□□□□ -0.88
RETREG3-205ENST00000586870 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
RETREG3-205ENST00000586870 PRO0628Q9UI54 55 aa9.55□□□□□ -0.88
RETREG3-205ENST00000586870 A0A1B0GU69 56 aa9.49□□□□□ -0.89
RETREG3-205ENST00000586870 A6NED7 52 aa9.46□□□□□ -0.89
RETREG3-205ENST00000586870 FAT4Q6V0I7 4981 aa9.44□□□□□ -0.9
RETREG3-205ENST00000586870 SEC61GP60059 68 aa9.37□□□□□ -0.91
RETREG3-205ENST00000586870 CDC42SE1Q9NRR8 79 aa9.36□□□□□ -0.91
RETREG3-205ENST00000586870 LCA10Q71F78 164 aa9.35□□□□□ -0.91
RETREG3-205ENST00000586870 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
RETREG3-205ENST00000586870 A8MU10 97 aa9.29□□□□□ -0.92
RETREG3-205ENST00000586870 UQCR11O14957 56 aa9.27□□□□□ -0.92
RETREG3-205ENST00000586870 H1FX-AS1Q4G0G2 97 aa9.27□□□□□ -0.92
RETREG3-205ENST00000586870 RBM12B-AS1Q9P1G2 102 aa9.27□□□□□ -0.92
RETREG3-205ENST00000586870 S4R3F8 94 aa9.27□□□□□ -0.93
RETREG3-205ENST00000586870 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
RETREG3-205ENST00000586870 KRTAP19-2Q3LHN2 52 aa9.22□□□□□ -0.93
RETREG3-205ENST00000586870 SPATA8Q6RVD6 105 aa9.22□□□□□ -0.93
RETREG3-205ENST00000586870 LCE2CQ5TA81 110 aa9.21□□□□□ -0.93
RETREG3-205ENST00000586870 MIR22HGQ0VDD5 57 aa9.19□□□□□ -0.94
RETREG3-205ENST00000586870 M0R2T5 61 aa9.13□□□□□ -0.95
RETREG3-205ENST00000586870 MT1HP80294 61 aa9.13□□□□□ -0.95
RETREG3-205ENST00000586870 A0A1B0GU33 70 aa9.12□□□□□ -0.95
RETREG3-205ENST00000586870 KRTAP9-2Q9BYQ4 174 aa9.09□□□□□ -0.95
RETREG3-205ENST00000586870 PMAIP1Q13794 54 aa9.08□□□□□ -0.96
RETREG3-205ENST00000586870 CSAG1Q6PB30 78 aa9.04□□□□□ -0.96
RETREG3-205ENST00000586870 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
RETREG3-205ENST00000586870 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
RETREG3-205ENST00000586870 A6NN06 94 aa8.99□□□□□ -0.97
RETREG3-205ENST00000586870 H0YAA0 97 aa8.99□□□□□ -0.97
RETREG3-205ENST00000586870 FLGP20930 4061 aaPredicted RBP8.91□□□□□ -0.98
RETREG3-205ENST00000586870 ADM2Q7Z4H4 148 aa8.9□□□□□ -0.99
RETREG3-205ENST00000586870 P0C880 135 aa8.87□□□□□ -0.99
RETREG3-205ENST00000586870 LORP23490 312 aaPredicted RBP8.86□□□□□ -0.99
RETREG3-205ENST00000586870 LCE2DQ5TA82 110 aaPredicted RBP8.81□□□□□ -1
RETREG3-205ENST00000586870 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
RETREG3-205ENST00000586870 KRTAP13-4Q3LI77 160 aa8.79□□□□□ -1
RETREG3-205ENST00000586870 KRTAP9-6A0A140TA67 174 aa8.78□□□□□ -1
RETREG3-205ENST00000586870 K7ERS5 55 aa8.73□□□□□ -1.01
RETREG3-205ENST00000586870 FSIP2Q5CZC0 6907 aa8.73□□□□□ -1.01
RETREG3-205ENST00000586870 M0QZ58 72 aa8.72□□□□□ -1.01
RETREG3-205ENST00000586870 A0A0D9SG42 100 aa8.66□□□□□ -1.02
RETREG3-205ENST00000586870 KRTAP9-8Q9BYQ0 159 aa8.66□□□□□ -1.02
RETREG3-205ENST00000586870 MT2AP02795 61 aa8.59□□□□□ -1.03
RETREG3-205ENST00000586870 KRTAP10-10P60014 251 aa8.58□□□□□ -1.04
RETREG3-205ENST00000586870 CRCT1Q9UGL9 99 aa8.58□□□□□ -1.04
RETREG3-205ENST00000586870 R4GN34 69 aa8.55□□□□□ -1.04
RETREG3-205ENST00000586870 MT1FP04733 61 aa8.52□□□□□ -1.05
RETREG3-205ENST00000586870 KRTAP12-1P59990 96 aa8.5□□□□□ -1.05
RETREG3-205ENST00000586870 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
RETREG3-205ENST00000586870 PRAC1Q96KF2 57 aa8.46□□□□□ -1.06
RETREG3-205ENST00000586870 SPINT4Q6UDR6 99 aa8.45□□□□□ -1.06
RETREG3-205ENST00000586870 ROMO1P60602 79 aa8.41□□□□□ -1.06
RETREG3-205ENST00000586870 LINC01554Q52M75 96 aa8.4□□□□□ -1.07
RETREG3-205ENST00000586870 CRIPTQ9P021 101 aa8.4□□□□□ -1.07
RETREG3-205ENST00000586870 KRTAP9-3Q9BYQ3 159 aa8.38□□□□□ -1.07
RETREG3-205ENST00000586870 USH2AO75445 5202 aa8.3□□□□□ -1.08
RETREG3-205ENST00000586870 LCE2BO14633 110 aa8.27□□□□□ -1.09
RETREG3-205ENST00000586870 SSPOA2VEC9 5147 aa8.24□□□□□ -1.09
RETREG3-205ENST00000586870 KRTAP25-1Q3LHN0 102 aa8.22□□□□□ -1.09
RETREG3-205ENST00000586870 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
RETREG3-205ENST00000586870 KRTAP19-1Q8IUB9 90 aa8.09□□□□□ -1.11
RETREG3-205ENST00000586870 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
RETREG3-205ENST00000586870 C10orf95Q9H7T3 257 aa8.03□□□□□ -1.12
RETREG3-205ENST00000586870 FCGBPQ9Y6R7 5405 aaPredicted RBP8.01□□□□□ -1.13
RETREG3-205ENST00000586870 KRTAP9-1A8MXZ3 250 aaPredicted RBP8□□□□□ -1.13
RETREG3-205ENST00000586870 KRTAP19-8Q3LI54 63 aa7.94□□□□□ -1.14
RETREG3-205ENST00000586870 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
RETREG3-205ENST00000586870 PLAC4Q8WY50 150 aa7.93□□□□□ -1.14
RETREG3-205ENST00000586870 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
RETREG3-205ENST00000586870 MT1BP07438 61 aa7.89□□□□□ -1.15
RETREG3-205ENST00000586870 MACF1Q9UPN3 7388 aaKnown RBP7.85□□□□□ -1.15
RETREG3-205ENST00000586870 SYNE2Q8WXH0 6885 aaKnown RBP7.78□□□□□ -1.16
RETREG3-205ENST00000586870 TNP1P09430 55 aa7.73□□□□□ -1.17
RETREG3-205ENST00000586870 PP632Q6XCG6 107 aa7.7□□□□□ -1.18
RETREG3-205ENST00000586870 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
RETREG3-205ENST00000586870 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
RETREG3-205ENST00000586870 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
RETREG3-205ENST00000586870 MT1XP80297 61 aa7.52□□□□□ -1.2
RETREG3-205ENST00000586870 KRTAP6-3Q3LI67 103 aa7.47□□□□□ -1.21
RETREG3-205ENST00000586870 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
RETREG3-205ENST00000586870 LCE3AQ5TA76 89 aa7.32□□□□□ -1.24
RETREG3-205ENST00000586870 NEBP20929 6669 aa7.28□□□□□ -1.24
RETREG3-205ENST00000586870 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
RETREG3-205ENST00000586870 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
RETREG3-205ENST00000586870 KRTAP10-7P60409 375 aaPredicted RBP7.23□□□□□ -1.25
RETREG3-205ENST00000586870 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
RETREG3-205ENST00000586870 KRTAP5-9P26371 169 aa7.12□□□□□ -1.27
RETREG3-205ENST00000586870 KMT2DO14686 5537 aa7.1□□□□□ -1.27
RETREG3-205ENST00000586870 KRTAP4-8A0A0G2JLE6 195 aa7.08□□□□□ -1.28
RETREG3-205ENST00000586870 KRTAP4-8Q9BYQ9 185 aa7.08□□□□□ -1.28
RETREG3-205ENST00000586870 SPRR2FQ96RM1 72 aa7.05□□□□□ -1.28
RETREG3-205ENST00000586870 MDN1Q9NU22 5596 aa7.04□□□□□ -1.28
RETREG3-205ENST00000586870 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
RETREG3-205ENST00000586870 H3BS24 57 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms