RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
RETREG3-204ENST00000586796 KRTAP9-6A0A140TA67 174 aa10.04□□□□□ -0.8
RETREG3-204ENST00000586796 CRCT1Q9UGL9 99 aa10.01□□□□□ -0.81
RETREG3-204ENST00000586796 NDUFC1O43677 76 aa9.97□□□□□ -0.81
RETREG3-204ENST00000586796 LCE2BO14633 110 aa9.95□□□□□ -0.82
RETREG3-204ENST00000586796 SNURFQ9Y675 71 aa9.94□□□□□ -0.82
RETREG3-204ENST00000586796 SERP2Q8N6R1 65 aa9.92□□□□□ -0.82
RETREG3-204ENST00000586796 USH2AO75445 5202 aa9.91□□□□□ -0.82
RETREG3-204ENST00000586796 DMAC1Q96GE9 116 aa9.91□□□□□ -0.82
RETREG3-204ENST00000586796 C20orf197Q8N268 126 aa9.88□□□□□ -0.83
RETREG3-204ENST00000586796 ACYP2P14621 99 aa9.77□□□□□ -0.85
RETREG3-204ENST00000586796 COX7CP15954 63 aa9.73□□□□□ -0.85
RETREG3-204ENST00000586796 SSPOA2VEC9 5147 aa9.71□□□□□ -0.85
RETREG3-204ENST00000586796 H0YAA0 97 aa9.71□□□□□ -0.86
RETREG3-204ENST00000586796 ADM2Q7Z4H4 148 aa9.71□□□□□ -0.86
RETREG3-204ENST00000586796 KRTAP19-1Q8IUB9 90 aa9.71□□□□□ -0.86
RETREG3-204ENST00000586796 SPANXA2-OT1Q8N9U9 137 aa9.67□□□□□ -0.86
RETREG3-204ENST00000586796 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
RETREG3-204ENST00000586796 SPRR2GQ9BYE4 73 aa9.63□□□□□ -0.87
RETREG3-204ENST00000586796 ANAPC13Q9BS18 74 aa9.61□□□□□ -0.87
RETREG3-204ENST00000586796 CRIPTQ9P021 101 aa9.61□□□□□ -0.87
RETREG3-204ENST00000586796 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
RETREG3-204ENST00000586796 CYSTM1Q9H1C7 97 aa9.54□□□□□ -0.88
RETREG3-204ENST00000586796 Q5VV11 94 aa9.53□□□□□ -0.88
RETREG3-204ENST00000586796 P0C880 135 aa9.52□□□□□ -0.89
RETREG3-204ENST00000586796 KRTAP19-8Q3LI54 63 aa9.51□□□□□ -0.89
RETREG3-204ENST00000586796 KRTAP19-6Q3LI70 58 aa9.51□□□□□ -0.89
RETREG3-204ENST00000586796 H7BZZ5 65 aa9.49□□□□□ -0.89
RETREG3-204ENST00000586796 MT1BP07438 61 aa9.49□□□□□ -0.89
RETREG3-204ENST00000586796 KRTAP3-2Q9BYR7 98 aa9.47□□□□□ -0.89
RETREG3-204ENST00000586796 FCGBPQ9Y6R7 5405 aaPredicted RBP9.46□□□□□ -0.9
RETREG3-204ENST00000586796 COA5Q86WW8 74 aa9.43□□□□□ -0.9
RETREG3-204ENST00000586796 CCDC179H3BU77 68 aa9.42□□□□□ -0.9
RETREG3-204ENST00000586796 R4GN34 69 aa9.42□□□□□ -0.9
RETREG3-204ENST00000586796 M0QZ58 72 aa9.38□□□□□ -0.91
RETREG3-204ENST00000586796 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.3□□□□□ -0.92
RETREG3-204ENST00000586796 A6NN06 94 aa9.27□□□□□ -0.93
RETREG3-204ENST00000586796 LINC01554Q52M75 96 aa9.26□□□□□ -0.93
RETREG3-204ENST00000586796 PLAC4Q8WY50 150 aa9.2□□□□□ -0.94
RETREG3-204ENST00000586796 KRTAP10-5P60370 271 aa9.18□□□□□ -0.94
RETREG3-204ENST00000586796 SEC61GP60059 68 aa9.15□□□□□ -0.94
RETREG3-204ENST00000586796 ATP5EP56381 51 aaPredicted RBP9.12□□□□□ -0.95
RETREG3-204ENST00000586796 SERP1Q9Y6X1 66 aa9.12□□□□□ -0.95
RETREG3-204ENST00000586796 MACF1Q9UPN3 7388 aaKnown RBP9.11□□□□□ -0.95
RETREG3-204ENST00000586796 KRTAP9-7A8MTY7 169 aa9.08□□□□□ -0.96
RETREG3-204ENST00000586796 KRTAP13-4Q3LI77 160 aa9.04□□□□□ -0.96
RETREG3-204ENST00000586796 TMEM258P61165 79 aa9.03□□□□□ -0.96
RETREG3-204ENST00000586796 SYNE2Q8WXH0 6885 aaKnown RBP9.01□□□□□ -0.97
RETREG3-204ENST00000586796 PRO2289Q9P1D8 64 aa9□□□□□ -0.97
RETREG3-204ENST00000586796 MT1XP80297 61 aa8.99□□□□□ -0.97
RETREG3-204ENST00000586796 A0A1B0GU69 56 aa8.96□□□□□ -0.98
RETREG3-204ENST00000586796 A0A1B0GU33 70 aa8.94□□□□□ -0.98
RETREG3-204ENST00000586796 SPATA8Q6RVD6 105 aa8.9□□□□□ -0.98
RETREG3-204ENST00000586796 A0A0D9SG42 100 aa8.86□□□□□ -0.99
RETREG3-204ENST00000586796 KRTAP6-3Q3LI67 103 aa8.79□□□□□ -1
RETREG3-204ENST00000586796 PRR15LQ9BU68 103 aa8.78□□□□□ -1
RETREG3-204ENST00000586796 LINC01558Q9Y6Z2 57 aa8.76□□□□□ -1.01
RETREG3-204ENST00000586796 CAMK2N1Q7Z7J9 78 aa8.74□□□□□ -1.01
RETREG3-204ENST00000586796 SPINT4Q6UDR6 99 aa8.71□□□□□ -1.02
RETREG3-204ENST00000586796 SMIM26A0A096LP01 95 aa8.67□□□□□ -1.02
RETREG3-204ENST00000586796 KRTAP12-2P59991 146 aa8.66□□□□□ -1.02
RETREG3-204ENST00000586796 A8MU10 97 aa8.65□□□□□ -1.02
RETREG3-204ENST00000586796 PCP4P48539 62 aa8.65□□□□□ -1.02
RETREG3-204ENST00000586796 KRTAP12-1P59990 96 aa8.63□□□□□ -1.03
RETREG3-204ENST00000586796 KRTAP10-7P60409 375 aaPredicted RBP8.62□□□□□ -1.03
RETREG3-204ENST00000586796 KMT2DO14686 5537 aa8.6□□□□□ -1.03
RETREG3-204ENST00000586796 KRTAP8-1Q8IUC2 63 aa8.53□□□□□ -1.04
RETREG3-204ENST00000586796 KRTAP4-8A0A0G2JLE6 195 aa8.52□□□□□ -1.05
RETREG3-204ENST00000586796 KRTAP5-9P26371 169 aa8.52□□□□□ -1.05
RETREG3-204ENST00000586796 KRTAP10-12P60413 245 aa8.52□□□□□ -1.05
RETREG3-204ENST00000586796 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
RETREG3-204ENST00000586796 UQCR11O14957 56 aa8.49□□□□□ -1.05
RETREG3-204ENST00000586796 V9GYY9 64 aa8.47□□□□□ -1.05
RETREG3-204ENST00000586796 PSPHP1O15172 72 aa8.44□□□□□ -1.06
RETREG3-204ENST00000586796 SPRR2FQ96RM1 72 aa8.44□□□□□ -1.06
RETREG3-204ENST00000586796 MUC12Q9UKN1 5478 aa8.44□□□□□ -1.06
RETREG3-204ENST00000586796 Q1T7F1 81 aa8.43□□□□□ -1.06
RETREG3-204ENST00000586796 NEBP20929 6669 aa8.4□□□□□ -1.07
RETREG3-204ENST00000586796 MIR22HGQ0VDD5 57 aa8.36□□□□□ -1.07
RETREG3-204ENST00000586796 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
RETREG3-204ENST00000586796 MDN1Q9NU22 5596 aa8.27□□□□□ -1.09
RETREG3-204ENST00000586796 SPRR2EP22531 72 aa8.23□□□□□ -1.09
RETREG3-204ENST00000586796 SPRR2BP35325 72 aa8.23□□□□□ -1.09
RETREG3-204ENST00000586796 SPRR2AP35326 72 aa8.23□□□□□ -1.09
RETREG3-204ENST00000586796 C10orf95Q9H7T3 257 aa8.23□□□□□ -1.09
RETREG3-204ENST00000586796 A6NED7 52 aa8.16□□□□□ -1.1
RETREG3-204ENST00000586796 TNP1P09430 55 aa8.13□□□□□ -1.11
RETREG3-204ENST00000586796 LCE1AQ5T7P2 110 aa8.13□□□□□ -1.11
RETREG3-204ENST00000586796 K7ERS5 55 aa8.12□□□□□ -1.11
RETREG3-204ENST00000586796 KRTAP19-7Q3SYF9 63 aa8.02□□□□□ -1.13
RETREG3-204ENST00000586796 KRTAP20-1Q3LI63 56 aa8□□□□□ -1.13
RETREG3-204ENST00000586796 LCE3AQ5TA76 89 aa7.97□□□□□ -1.13
RETREG3-204ENST00000586796 KRTAP19-5Q3LI72 72 aa7.96□□□□□ -1.14
RETREG3-204ENST00000586796 SPRR2DP22532 72 aa7.95□□□□□ -1.14
RETREG3-204ENST00000586796 MT1EP04732 61 aa7.94□□□□□ -1.14
RETREG3-204ENST00000586796 KRTAP2-3P0C7H8 128 aa7.87□□□□□ -1.15
RETREG3-204ENST00000586796 KRTAP2-4Q9BYR9 128 aa7.87□□□□□ -1.15
RETREG3-204ENST00000586796 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
RETREG3-204ENST00000586796 CDC42SE1Q9NRR8 79 aa7.82□□□□□ -1.16
RETREG3-204ENST00000586796 KRTAP19-3Q7Z4W3 81 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 240.6 ms