RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
NPC1-204ENST00000586718 FLGP20930 4061 aaPredicted RBP4.27□□□□□ -1.73
NPC1-204ENST00000586718 RPS28P62857 69 aaKnown RBP4.25□□□□□ -1.73
NPC1-204ENST00000586718 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
NPC1-204ENST00000586718 SMIM26A0A096LP01 95 aa4.22□□□□□ -1.73
NPC1-204ENST00000586718 LCA10Q71F78 164 aa4.22□□□□□ -1.73
NPC1-204ENST00000586718 KRTAP19-2Q3LHN2 52 aa4.19□□□□□ -1.74
NPC1-204ENST00000586718 CSAG1Q6PB30 78 aa4.19□□□□□ -1.74
NPC1-204ENST00000586718 V9GYY9 64 aa4.19□□□□□ -1.74
NPC1-204ENST00000586718 SEC61GP60059 68 aa4.15□□□□□ -1.75
NPC1-204ENST00000586718 PRR15LQ9BU68 103 aa4.15□□□□□ -1.75
NPC1-204ENST00000586718 M0R2T5 61 aa4.14□□□□□ -1.75
NPC1-204ENST00000586718 KRTAP3-3Q9BYR6 98 aa4.14□□□□□ -1.75
NPC1-204ENST00000586718 LCE2CQ5TA81 110 aa4.13□□□□□ -1.75
NPC1-204ENST00000586718 A0A1B0GU69 56 aa4.12□□□□□ -1.75
NPC1-204ENST00000586718 Q1T7F1 81 aa4.12□□□□□ -1.75
NPC1-204ENST00000586718 LINC01558Q9Y6Z2 57 aa4.12□□□□□ -1.75
NPC1-204ENST00000586718 MT1HP80294 61 aa4.1□□□□□ -1.75
NPC1-204ENST00000586718 KRTAP3-2Q9BYR7 98 aa4.09□□□□□ -1.75
NPC1-204ENST00000586718 H0YAA0 97 aa4.08□□□□□ -1.76
NPC1-204ENST00000586718 ADM2Q7Z4H4 148 aa4.06□□□□□ -1.76
NPC1-204ENST00000586718 PSPHP1O15172 72 aa4.05□□□□□ -1.76
NPC1-204ENST00000586718 Q5VV11 94 aa4□□□□□ -1.77
NPC1-204ENST00000586718 A0A1B0GU33 70 aa3.99□□□□□ -1.77
NPC1-204ENST00000586718 A6NED7 52 aa3.98□□□□□ -1.77
NPC1-204ENST00000586718 UQCR11O14957 56 aa3.98□□□□□ -1.77
NPC1-204ENST00000586718 P0C880 135 aa3.98□□□□□ -1.77
NPC1-204ENST00000586718 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
NPC1-204ENST00000586718 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
NPC1-204ENST00000586718 CRIPTQ9P021 101 aa3.96□□□□□ -1.78
NPC1-204ENST00000586718 R4GN34 69 aa3.95□□□□□ -1.78
NPC1-204ENST00000586718 M0QZ58 72 aa3.94□□□□□ -1.78
NPC1-204ENST00000586718 MT2AP02795 61 aa3.93□□□□□ -1.78
NPC1-204ENST00000586718 LORP23490 312 aaPredicted RBP3.93□□□□□ -1.78
NPC1-204ENST00000586718 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
NPC1-204ENST00000586718 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
NPC1-204ENST00000586718 KRTAP9-8Q9BYQ0 159 aa3.91□□□□□ -1.78
NPC1-204ENST00000586718 MT1FP04733 61 aa3.89□□□□□ -1.79
NPC1-204ENST00000586718 SPATA8Q6RVD6 105 aa3.88□□□□□ -1.79
NPC1-204ENST00000586718 BRK1Q8WUW1 75 aa3.88□□□□□ -1.79
NPC1-204ENST00000586718 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
NPC1-204ENST00000586718 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
NPC1-204ENST00000586718 LINC01554Q52M75 96 aa3.86□□□□□ -1.79
NPC1-204ENST00000586718 A0A0D9SG42 100 aa3.85□□□□□ -1.79
NPC1-204ENST00000586718 K7ERS5 55 aa3.84□□□□□ -1.79
NPC1-204ENST00000586718 A8MU10 97 aa3.82□□□□□ -1.8
NPC1-204ENST00000586718 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
NPC1-204ENST00000586718 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
NPC1-204ENST00000586718 A6NN06 94 aa3.79□□□□□ -1.8
NPC1-204ENST00000586718 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.8
NPC1-204ENST00000586718 KRTAP19-1Q8IUB9 90 aa3.78□□□□□ -1.8
NPC1-204ENST00000586718 KRTAP9-3Q9BYQ3 159 aa3.77□□□□□ -1.81
NPC1-204ENST00000586718 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
NPC1-204ENST00000586718 KRTAP12-1P59990 96 aa3.74□□□□□ -1.81
NPC1-204ENST00000586718 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
NPC1-204ENST00000586718 KRTAP19-8Q3LI54 63 aa3.73□□□□□ -1.81
NPC1-204ENST00000586718 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
NPC1-204ENST00000586718 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
NPC1-204ENST00000586718 USH2AO75445 5202 aa3.71□□□□□ -1.82
NPC1-204ENST00000586718 LCE2BO14633 110 aa3.67□□□□□ -1.82
NPC1-204ENST00000586718 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
NPC1-204ENST00000586718 MT1BP07438 61 aa3.66□□□□□ -1.82
NPC1-204ENST00000586718 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.83
NPC1-204ENST00000586718 KRTAP4-6Q9BYQ5 205 aa3.65□□□□□ -1.83
NPC1-204ENST00000586718 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
NPC1-204ENST00000586718 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
NPC1-204ENST00000586718 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
NPC1-204ENST00000586718 ROMO1P60602 79 aa3.6□□□□□ -1.83
NPC1-204ENST00000586718 KRTAP9-6A0A140TA67 174 aa3.57□□□□□ -1.84
NPC1-204ENST00000586718 MT1XP80297 61 aa3.54□□□□□ -1.84
NPC1-204ENST00000586718 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
NPC1-204ENST00000586718 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
NPC1-204ENST00000586718 TNP1P09430 55 aa3.51□□□□□ -1.85
NPC1-204ENST00000586718 KRTAP19-6Q3LI70 58 aa3.51□□□□□ -1.85
NPC1-204ENST00000586718 H3BS24 57 aa3.5□□□□□ -1.85
NPC1-204ENST00000586718 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
NPC1-204ENST00000586718 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
NPC1-204ENST00000586718 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
NPC1-204ENST00000586718 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
NPC1-204ENST00000586718 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
NPC1-204ENST00000586718 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
NPC1-204ENST00000586718 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
NPC1-204ENST00000586718 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
NPC1-204ENST00000586718 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
NPC1-204ENST00000586718 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
NPC1-204ENST00000586718 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
NPC1-204ENST00000586718 KMT2DO14686 5537 aa3.31□□□□□ -1.88
NPC1-204ENST00000586718 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
NPC1-204ENST00000586718 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
NPC1-204ENST00000586718 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
NPC1-204ENST00000586718 KRTAP4-8Q9BYQ9 185 aa3.23□□□□□ -1.89
NPC1-204ENST00000586718 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
NPC1-204ENST00000586718 KRTAP9-7A8MTY7 169 aa3.2□□□□□ -1.9
NPC1-204ENST00000586718 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
NPC1-204ENST00000586718 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
NPC1-204ENST00000586718 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
NPC1-204ENST00000586718 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
NPC1-204ENST00000586718 SPRR2FQ96RM1 72 aa3.14□□□□□ -1.91
NPC1-204ENST00000586718 MT1EP04732 61 aa3.12□□□□□ -1.91
NPC1-204ENST00000586718 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms