RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 LCE2DQ5TA82 110 aaPredicted RBP4.43□□□□□ -1.7
ATG4D-202ENST00000585437 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
ATG4D-202ENST00000585437 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
ATG4D-202ENST00000585437 COX6B2Q6YFQ2 88 aa4.42□□□□□ -1.7
ATG4D-202ENST00000585437 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
ATG4D-202ENST00000585437 C4orf26Q17RF5 130 aa4.4□□□□□ -1.71
ATG4D-202ENST00000585437 A8MUN3 132 aa4.39□□□□□ -1.71
ATG4D-202ENST00000585437 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
ATG4D-202ENST00000585437 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
ATG4D-202ENST00000585437 M0R2T5 61 aa4.35□□□□□ -1.71
ATG4D-202ENST00000585437 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
ATG4D-202ENST00000585437 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
ATG4D-202ENST00000585437 SPINK7P58062 85 aa4.31□□□□□ -1.72
ATG4D-202ENST00000585437 SPTSSBQ8NFR3 76 aa4.31□□□□□ -1.72
ATG4D-202ENST00000585437 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
ATG4D-202ENST00000585437 PSPHP1O15172 72 aa4.3□□□□□ -1.72
ATG4D-202ENST00000585437 RBM12B-AS1Q9P1G2 102 aa4.3□□□□□ -1.72
ATG4D-202ENST00000585437 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
ATG4D-202ENST00000585437 Q5VV11 94 aa4.28□□□□□ -1.72
ATG4D-202ENST00000585437 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
ATG4D-202ENST00000585437 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
ATG4D-202ENST00000585437 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
ATG4D-202ENST00000585437 A0A1B0GU69 56 aa4.23□□□□□ -1.73
ATG4D-202ENST00000585437 MT2AP02795 61 aa4.23□□□□□ -1.73
ATG4D-202ENST00000585437 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
ATG4D-202ENST00000585437 A6NED7 52 aa4.22□□□□□ -1.73
ATG4D-202ENST00000585437 USH2AO75445 5202 aa4.22□□□□□ -1.73
ATG4D-202ENST00000585437 SEC61GP60059 68 aa4.21□□□□□ -1.74
ATG4D-202ENST00000585437 MT1FP04733 61 aa4.2□□□□□ -1.74
ATG4D-202ENST00000585437 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
ATG4D-202ENST00000585437 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
ATG4D-202ENST00000585437 CDC42SE1Q9NRR8 79 aa4.17□□□□□ -1.74
ATG4D-202ENST00000585437 KRTAP9-3Q9BYQ3 159 aa4.16□□□□□ -1.74
ATG4D-202ENST00000585437 UQCR11O14957 56 aa4.14□□□□□ -1.75
ATG4D-202ENST00000585437 H1FX-AS1Q4G0G2 97 aa4.14□□□□□ -1.75
ATG4D-202ENST00000585437 LCE2BO14633 110 aa4.13□□□□□ -1.75
ATG4D-202ENST00000585437 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
ATG4D-202ENST00000585437 S4R3F8 94 aa4.12□□□□□ -1.75
ATG4D-202ENST00000585437 LCA10Q71F78 164 aa4.1□□□□□ -1.75
ATG4D-202ENST00000585437 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
ATG4D-202ENST00000585437 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
ATG4D-202ENST00000585437 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
ATG4D-202ENST00000585437 A0A1B0GU33 70 aa4.04□□□□□ -1.76
ATG4D-202ENST00000585437 A8MU10 97 aa4.04□□□□□ -1.76
ATG4D-202ENST00000585437 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
ATG4D-202ENST00000585437 KRTAP3-3Q9BYR6 98 aa4.03□□□□□ -1.76
ATG4D-202ENST00000585437 CSAG1Q6PB30 78 aa4.02□□□□□ -1.77
ATG4D-202ENST00000585437 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
ATG4D-202ENST00000585437 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
ATG4D-202ENST00000585437 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
ATG4D-202ENST00000585437 A6NN06 94 aa3.98□□□□□ -1.77
ATG4D-202ENST00000585437 H0YAA0 97 aa3.97□□□□□ -1.77
ATG4D-202ENST00000585437 K7ERS5 55 aa3.95□□□□□ -1.78
ATG4D-202ENST00000585437 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
ATG4D-202ENST00000585437 KRTAP3-2Q9BYR7 98 aa3.93□□□□□ -1.78
ATG4D-202ENST00000585437 ADM2Q7Z4H4 148 aa3.92□□□□□ -1.78
ATG4D-202ENST00000585437 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
ATG4D-202ENST00000585437 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
ATG4D-202ENST00000585437 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
ATG4D-202ENST00000585437 M0QZ58 72 aa3.89□□□□□ -1.79
ATG4D-202ENST00000585437 MT1BP07438 61 aa3.88□□□□□ -1.79
ATG4D-202ENST00000585437 P0C880 135 aa3.88□□□□□ -1.79
ATG4D-202ENST00000585437 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
ATG4D-202ENST00000585437 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
ATG4D-202ENST00000585437 KRTAP13-4Q3LI77 160 aa3.83□□□□□ -1.8
ATG4D-202ENST00000585437 CRIPTQ9P021 101 aa3.83□□□□□ -1.8
ATG4D-202ENST00000585437 A0A0D9SG42 100 aa3.81□□□□□ -1.8
ATG4D-202ENST00000585437 R4GN34 69 aa3.81□□□□□ -1.8
ATG4D-202ENST00000585437 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
ATG4D-202ENST00000585437 ROMO1P60602 79 aa3.75□□□□□ -1.81
ATG4D-202ENST00000585437 KRTAP12-1P59990 96 aa3.74□□□□□ -1.81
ATG4D-202ENST00000585437 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
ATG4D-202ENST00000585437 SPINT4Q6UDR6 99 aa3.73□□□□□ -1.81
ATG4D-202ENST00000585437 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
ATG4D-202ENST00000585437 LINC01554Q52M75 96 aa3.71□□□□□ -1.82
ATG4D-202ENST00000585437 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
ATG4D-202ENST00000585437 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
ATG4D-202ENST00000585437 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
ATG4D-202ENST00000585437 MT1XP80297 61 aa3.64□□□□□ -1.83
ATG4D-202ENST00000585437 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
ATG4D-202ENST00000585437 NEBP20929 6669 aa3.61□□□□□ -1.83
ATG4D-202ENST00000585437 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
ATG4D-202ENST00000585437 CAMK2N1Q7Z7J9 78 aa3.6□□□□□ -1.83
ATG4D-202ENST00000585437 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
ATG4D-202ENST00000585437 KMT2DO14686 5537 aa3.6□□□□□ -1.83
ATG4D-202ENST00000585437 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
ATG4D-202ENST00000585437 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
ATG4D-202ENST00000585437 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
ATG4D-202ENST00000585437 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
ATG4D-202ENST00000585437 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
ATG4D-202ENST00000585437 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
ATG4D-202ENST00000585437 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
ATG4D-202ENST00000585437 TNP1P09430 55 aa3.45□□□□□ -1.86
ATG4D-202ENST00000585437 KRTAP4-8A0A0G2JLE6 195 aa3.44□□□□□ -1.86
ATG4D-202ENST00000585437 KRTAP4-8Q9BYQ9 185 aa3.44□□□□□ -1.86
ATG4D-202ENST00000585437 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
ATG4D-202ENST00000585437 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
ATG4D-202ENST00000585437 SPRR2EP22531 72 aa3.4□□□□□ -1.87
ATG4D-202ENST00000585437 SPRR2BP35325 72 aa3.4□□□□□ -1.87
ATG4D-202ENST00000585437 SPRR2AP35326 72 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms