RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 M0R2T5 61 aa8.34□□□□□ -1.07
GCDH-203ENST00000585420 KRTAP3-1Q9BYR8 98 aa8.34□□□□□ -1.07
GCDH-203ENST00000585420 DMAC1Q96GE9 116 aa8.3□□□□□ -1.08
GCDH-203ENST00000585420 A8MUN3 132 aa8.29□□□□□ -1.08
GCDH-203ENST00000585420 KRTAP10-6P60371 365 aaPredicted RBP8.29□□□□□ -1.08
GCDH-203ENST00000585420 H1FX-AS1Q4G0G2 97 aa8.29□□□□□ -1.08
GCDH-203ENST00000585420 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
GCDH-203ENST00000585420 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
GCDH-203ENST00000585420 Q1T7F1 81 aa8.28□□□□□ -1.08
GCDH-203ENST00000585420 V9GYY9 64 aa8.26□□□□□ -1.09
GCDH-203ENST00000585420 KRTAP9-2Q9BYQ4 174 aa8.23□□□□□ -1.09
GCDH-203ENST00000585420 ACYP2P14621 99 aa8.23□□□□□ -1.09
GCDH-203ENST00000585420 COA5Q86WW8 74 aa8.21□□□□□ -1.09
GCDH-203ENST00000585420 S4R3F8 94 aa8.18□□□□□ -1.1
GCDH-203ENST00000585420 LCA10Q71F78 164 aa8.14□□□□□ -1.11
GCDH-203ENST00000585420 CHKB-CPT1BH3BT56 60 aa8.12□□□□□ -1.11
GCDH-203ENST00000585420 LCE2DQ5TA82 110 aaPredicted RBP8.12□□□□□ -1.11
GCDH-203ENST00000585420 BRK1Q8WUW1 75 aa8.09□□□□□ -1.11
GCDH-203ENST00000585420 KRTAP9-8Q9BYQ0 159 aa8.09□□□□□ -1.11
GCDH-203ENST00000585420 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
GCDH-203ENST00000585420 PSPHP1O15172 72 aa8.03□□□□□ -1.12
GCDH-203ENST00000585420 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
GCDH-203ENST00000585420 LINC01558Q9Y6Z2 57 aa8.02□□□□□ -1.13
GCDH-203ENST00000585420 FSIP2Q5CZC0 6907 aa8□□□□□ -1.13
GCDH-203ENST00000585420 SPTSSBQ8NFR3 76 aa8□□□□□ -1.13
GCDH-203ENST00000585420 Q5VV11 94 aa7.99□□□□□ -1.13
GCDH-203ENST00000585420 MT2AP02795 61 aa7.98□□□□□ -1.13
GCDH-203ENST00000585420 PRR15LQ9BU68 103 aa7.98□□□□□ -1.13
GCDH-203ENST00000585420 MT1FP04733 61 aa7.93□□□□□ -1.14
GCDH-203ENST00000585420 KRTAP10-10P60014 251 aa7.89□□□□□ -1.15
GCDH-203ENST00000585420 KRTAP9-6A0A140TA67 174 aa7.85□□□□□ -1.15
GCDH-203ENST00000585420 A6NED7 52 aa7.82□□□□□ -1.16
GCDH-203ENST00000585420 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
GCDH-203ENST00000585420 CRCT1Q9UGL9 99 aa7.81□□□□□ -1.16
GCDH-203ENST00000585420 USH2AO75445 5202 aa7.81□□□□□ -1.16
GCDH-203ENST00000585420 H0YAA0 97 aa7.79□□□□□ -1.16
GCDH-203ENST00000585420 ADM2Q7Z4H4 148 aa7.78□□□□□ -1.16
GCDH-203ENST00000585420 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
GCDH-203ENST00000585420 A0A1B0GU69 56 aa7.77□□□□□ -1.17
GCDH-203ENST00000585420 PMAIP1Q13794 54 aa7.76□□□□□ -1.17
GCDH-203ENST00000585420 LCE2BO14633 110 aa7.74□□□□□ -1.17
GCDH-203ENST00000585420 SEC61GP60059 68 aa7.73□□□□□ -1.17
GCDH-203ENST00000585420 SSPOA2VEC9 5147 aa7.71□□□□□ -1.18
GCDH-203ENST00000585420 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
GCDH-203ENST00000585420 P0C880 135 aa7.69□□□□□ -1.18
GCDH-203ENST00000585420 A8MU10 97 aa7.64□□□□□ -1.19
GCDH-203ENST00000585420 UQCR11O14957 56 aa7.63□□□□□ -1.19
GCDH-203ENST00000585420 SPATA8Q6RVD6 105 aa7.59□□□□□ -1.19
GCDH-203ENST00000585420 KTN1-AS1Q86SY8 53 aa7.58□□□□□ -1.2
GCDH-203ENST00000585420 CRIPTQ9P021 101 aa7.56□□□□□ -1.2
GCDH-203ENST00000585420 A6NN06 94 aa7.54□□□□□ -1.2
GCDH-203ENST00000585420 MIR22HGQ0VDD5 57 aa7.54□□□□□ -1.2
GCDH-203ENST00000585420 R4GN34 69 aa7.54□□□□□ -1.2
GCDH-203ENST00000585420 A0A1B0GU33 70 aa7.53□□□□□ -1.2
GCDH-203ENST00000585420 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.2
GCDH-203ENST00000585420 M0QZ58 72 aa7.51□□□□□ -1.21
GCDH-203ENST00000585420 FCGBPQ9Y6R7 5405 aaPredicted RBP7.46□□□□□ -1.22
GCDH-203ENST00000585420 SPRR2GQ9BYE4 73 aa7.45□□□□□ -1.22
GCDH-203ENST00000585420 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
GCDH-203ENST00000585420 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.23
GCDH-203ENST00000585420 LINC01554Q52M75 96 aa7.4□□□□□ -1.23
GCDH-203ENST00000585420 KRTAP19-8Q3LI54 63 aa7.35□□□□□ -1.23
GCDH-203ENST00000585420 MT1BP07438 61 aa7.34□□□□□ -1.23
GCDH-203ENST00000585420 A0A0D9SG42 100 aa7.32□□□□□ -1.24
GCDH-203ENST00000585420 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.27□□□□□ -1.25
GCDH-203ENST00000585420 MACF1Q9UPN3 7388 aaKnown RBP7.2□□□□□ -1.26
GCDH-203ENST00000585420 K7ERS5 55 aa7.19□□□□□ -1.26
GCDH-203ENST00000585420 PLAC4Q8WY50 150 aa7.18□□□□□ -1.26
GCDH-203ENST00000585420 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
GCDH-203ENST00000585420 KRTAP12-1P59990 96 aa7.14□□□□□ -1.27
GCDH-203ENST00000585420 KRTAP12-2P59991 146 aa7.13□□□□□ -1.27
GCDH-203ENST00000585420 KRTAP10-5P60370 271 aa7.11□□□□□ -1.27
GCDH-203ENST00000585420 KRTAP9-7A8MTY7 169 aa7.1□□□□□ -1.27
GCDH-203ENST00000585420 SYNE2Q8WXH0 6885 aaKnown RBP7.1□□□□□ -1.27
GCDH-203ENST00000585420 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
GCDH-203ENST00000585420 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
GCDH-203ENST00000585420 MT1XP80297 61 aa6.95□□□□□ -1.3
GCDH-203ENST00000585420 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
GCDH-203ENST00000585420 ROMO1P60602 79 aa6.92□□□□□ -1.3
GCDH-203ENST00000585420 KMT2DO14686 5537 aa6.86□□□□□ -1.31
GCDH-203ENST00000585420 KRTAP6-3Q3LI67 103 aa6.85□□□□□ -1.31
GCDH-203ENST00000585420 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
GCDH-203ENST00000585420 MUC12Q9UKN1 5478 aa6.78□□□□□ -1.32
GCDH-203ENST00000585420 C10orf95Q9H7T3 257 aa6.77□□□□□ -1.33
GCDH-203ENST00000585420 KRTAP5-9P26371 169 aa6.66□□□□□ -1.34
GCDH-203ENST00000585420 KRTAP10-7P60409 375 aaPredicted RBP6.65□□□□□ -1.34
GCDH-203ENST00000585420 TNP1P09430 55 aa6.64□□□□□ -1.35
GCDH-203ENST00000585420 MDN1Q9NU22 5596 aa6.61□□□□□ -1.35
GCDH-203ENST00000585420 KRTAP4-8A0A0G2JLE6 195 aa6.6□□□□□ -1.35
GCDH-203ENST00000585420 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
GCDH-203ENST00000585420 H3BS24 57 aa6.59□□□□□ -1.35
GCDH-203ENST00000585420 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
GCDH-203ENST00000585420 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
GCDH-203ENST00000585420 NEBP20929 6669 aa6.54□□□□□ -1.36
GCDH-203ENST00000585420 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
GCDH-203ENST00000585420 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
GCDH-203ENST00000585420 A0A0A0MQY5 61 aa6.36□□□□□ -1.39
GCDH-203ENST00000585420 SPRR2EP22531 72 aa6.36□□□□□ -1.39
GCDH-203ENST00000585420 SPRR2BP35325 72 aa6.36□□□□□ -1.39
GCDH-203ENST00000585420 SPRR2AP35326 72 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms