RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 KRTAP10-10P60014 251 aa11.16□□□□□ -0.62
LSM7-202ENST00000585395 TRAV7A0A075B6U4 112 aa11.14□□□□□ -0.63
LSM7-202ENST00000585395 LCE2BO14633 110 aa11.12□□□□□ -0.63
LSM7-202ENST00000585395 KRTAP3-1Q9BYR8 98 aa11.12□□□□□ -0.63
LSM7-202ENST00000585395 S4R3F8 94 aa11.12□□□□□ -0.63
LSM7-202ENST00000585395 MT1FP04733 61 aa11.1□□□□□ -0.63
LSM7-202ENST00000585395 A8MUN3 132 aa11.07□□□□□ -0.64
LSM7-202ENST00000585395 KLKP1Q107X0 134 aa11.05□□□□□ -0.64
LSM7-202ENST00000585395 CSAG1Q6PB30 78 aa11.01□□□□□ -0.65
LSM7-202ENST00000585395 KRTAP9-3Q9BYQ3 159 aa11□□□□□ -0.65
LSM7-202ENST00000585395 LCA10Q71F78 164 aa10.97□□□□□ -0.65
LSM7-202ENST00000585395 SERP2Q8N6R1 65 aa10.94□□□□□ -0.66
LSM7-202ENST00000585395 KRTAP6-3Q3LI67 103 aa10.9□□□□□ -0.66
LSM7-202ENST00000585395 KRTAP19-6Q3LI70 58 aa10.9□□□□□ -0.66
LSM7-202ENST00000585395 NDUFC1O43677 76 aa10.88□□□□□ -0.67
LSM7-202ENST00000585395 DMAC1Q96GE9 116 aa10.83□□□□□ -0.68
LSM7-202ENST00000585395 C20orf197Q8N268 126 aa10.81□□□□□ -0.68
LSM7-202ENST00000585395 KRTAP3-3Q9BYR6 98 aa10.8□□□□□ -0.68
LSM7-202ENST00000585395 SNURFQ9Y675 71 aa10.8□□□□□ -0.68
LSM7-202ENST00000585395 ACYP2P14621 99 aa10.73□□□□□ -0.69
LSM7-202ENST00000585395 COX7CP15954 63 aa10.72□□□□□ -0.69
LSM7-202ENST00000585395 NEBP20929 6669 aa10.71□□□□□ -0.7
LSM7-202ENST00000585395 SPANXA2-OT1Q8N9U9 137 aa10.68□□□□□ -0.7
LSM7-202ENST00000585395 H0YAA0 97 aa10.62□□□□□ -0.71
LSM7-202ENST00000585395 ANAPC13Q9BS18 74 aa10.61□□□□□ -0.71
LSM7-202ENST00000585395 SPTSSBQ8NFR3 76 aa10.6□□□□□ -0.71
LSM7-202ENST00000585395 CHKB-CPT1BH3BT56 60 aa10.57□□□□□ -0.72
LSM7-202ENST00000585395 CRIPTQ9P021 101 aa10.54□□□□□ -0.72
LSM7-202ENST00000585395 ADM2Q7Z4H4 148 aa10.48□□□□□ -0.73
LSM7-202ENST00000585395 KRTAP20-1Q3LI63 56 aa10.47□□□□□ -0.73
LSM7-202ENST00000585395 MUC12Q9UKN1 5478 aa10.45□□□□□ -0.74
LSM7-202ENST00000585395 H7BZZ5 65 aa10.4□□□□□ -0.74
LSM7-202ENST00000585395 SPRR2GQ9BYE4 73 aa10.39□□□□□ -0.75
LSM7-202ENST00000585395 Q5VV11 94 aa10.33□□□□□ -0.76
LSM7-202ENST00000585395 COA5Q86WW8 74 aa10.31□□□□□ -0.76
LSM7-202ENST00000585395 CYSTM1Q9H1C7 97 aa10.31□□□□□ -0.76
LSM7-202ENST00000585395 CCDC179H3BU77 68 aa10.28□□□□□ -0.76
LSM7-202ENST00000585395 KRTAP19-8Q3LI54 63 aa10.25□□□□□ -0.77
LSM7-202ENST00000585395 R4GN34 69 aa10.25□□□□□ -0.77
LSM7-202ENST00000585395 P0C880 135 aa10.23□□□□□ -0.77
LSM7-202ENST00000585395 MT1BP07438 61 aa10.2□□□□□ -0.78
LSM7-202ENST00000585395 KRTAP3-2Q9BYR7 98 aa10.2□□□□□ -0.78
LSM7-202ENST00000585395 ATP5EP56381 51 aaPredicted RBP10.19□□□□□ -0.78
LSM7-202ENST00000585395 A6NN06 94 aa10.18□□□□□ -0.78
LSM7-202ENST00000585395 M0QZ58 72 aa10.15□□□□□ -0.78
LSM7-202ENST00000585395 MDN1Q9NU22 5596 aa10.12□□□□□ -0.79
LSM7-202ENST00000585395 SEC61GP60059 68 aa10.1□□□□□ -0.79
LSM7-202ENST00000585395 KRTAP5-9P26371 169 aa10.07□□□□□ -0.8
LSM7-202ENST00000585395 KMT2DO14686 5537 aa10.06□□□□□ -0.8
LSM7-202ENST00000585395 TMEM258P61165 79 aa10.05□□□□□ -0.8
LSM7-202ENST00000585395 SERP1Q9Y6X1 66 aa10.05□□□□□ -0.8
LSM7-202ENST00000585395 KRTAP2-3P0C7H8 128 aa10□□□□□ -0.81
LSM7-202ENST00000585395 KRTAP2-4Q9BYR9 128 aa10□□□□□ -0.81
LSM7-202ENST00000585395 PLAC4Q8WY50 150 aa9.99□□□□□ -0.81
LSM7-202ENST00000585395 KRTAP10-5P60370 271 aa9.98□□□□□ -0.81
LSM7-202ENST00000585395 LINC01554Q52M75 96 aa9.96□□□□□ -0.82
LSM7-202ENST00000585395 A0A1B0GU69 56 aa9.84□□□□□ -0.83
LSM7-202ENST00000585395 PRO2289Q9P1D8 64 aa9.83□□□□□ -0.84
LSM7-202ENST00000585395 A0A1B0GU33 70 aa9.78□□□□□ -0.84
LSM7-202ENST00000585395 PRR15LQ9BU68 103 aa9.77□□□□□ -0.85
LSM7-202ENST00000585395 KRTAP13-4Q3LI77 160 aa9.7□□□□□ -0.86
LSM7-202ENST00000585395 LINC01558Q9Y6Z2 57 aa9.65□□□□□ -0.86
LSM7-202ENST00000585395 KRTAP2-2Q9BYT5 123 aa9.63□□□□□ -0.87
LSM7-202ENST00000585395 KRTAP2-1Q9BYU5 128 aa9.63□□□□□ -0.87
LSM7-202ENST00000585395 SPRR2EP22531 72 aa9.61□□□□□ -0.87
LSM7-202ENST00000585395 SPRR2BP35325 72 aa9.61□□□□□ -0.87
LSM7-202ENST00000585395 SPRR2AP35326 72 aa9.61□□□□□ -0.87
LSM7-202ENST00000585395 PCP4P48539 62 aa9.61□□□□□ -0.87
LSM7-202ENST00000585395 MT1XP80297 61 aa9.61□□□□□ -0.87
LSM7-202ENST00000585395 SPATA8Q6RVD6 105 aa9.6□□□□□ -0.87
LSM7-202ENST00000585395 SMIM26A0A096LP01 95 aa9.57□□□□□ -0.88
LSM7-202ENST00000585395 A0A0D9SG42 100 aa9.56□□□□□ -0.88
LSM7-202ENST00000585395 SPRR2FQ96RM1 72 aa9.56□□□□□ -0.88
LSM7-202ENST00000585395 CAMK2N1Q7Z7J9 78 aa9.52□□□□□ -0.89
LSM7-202ENST00000585395 V9GYY9 64 aa9.5□□□□□ -0.89
LSM7-202ENST00000585395 SPINT4Q6UDR6 99 aa9.44□□□□□ -0.9
LSM7-202ENST00000585395 UQCR11O14957 56 aa9.39□□□□□ -0.91
LSM7-202ENST00000585395 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
LSM7-202ENST00000585395 LCE1AQ5T7P2 110 aa9.38□□□□□ -0.91
LSM7-202ENST00000585395 KRTAP8-1Q8IUC2 63 aa9.35□□□□□ -0.91
LSM7-202ENST00000585395 KRTAP12-1P59990 96 aa9.34□□□□□ -0.91
LSM7-202ENST00000585395 Q1T7F1 81 aa9.34□□□□□ -0.91
LSM7-202ENST00000585395 A8MU10 97 aa9.31□□□□□ -0.92
LSM7-202ENST00000585395 SPRR2DP22532 72 aa9.31□□□□□ -0.92
LSM7-202ENST00000585395 RPS28P62857 69 aaKnown RBP9.3□□□□□ -0.92
LSM7-202ENST00000585395 GPR98Q8WXG9 6306 aa9.27□□□□□ -0.93
LSM7-202ENST00000585395 PSPHP1O15172 72 aa9.23□□□□□ -0.93
LSM7-202ENST00000585395 MIR22HGQ0VDD5 57 aa9.19□□□□□ -0.94
LSM7-202ENST00000585395 KRTAP10-7P60409 375 aaPredicted RBP9.18□□□□□ -0.94
LSM7-202ENST00000585395 KRTAP10-12P60413 245 aa9.17□□□□□ -0.94
LSM7-202ENST00000585395 KRTAP4-8A0A0G2JLE6 195 aa9.15□□□□□ -0.94
LSM7-202ENST00000585395 KRTAP4-8Q9BYQ9 185 aa9.15□□□□□ -0.94
LSM7-202ENST00000585395 LCE3BQ5TA77 95 aa9.12□□□□□ -0.95
LSM7-202ENST00000585395 K7ERS5 55 aa9.07□□□□□ -0.96
LSM7-202ENST00000585395 A6NED7 52 aa9.02□□□□□ -0.97
LSM7-202ENST00000585395 TNP1P09430 55 aa8.9□□□□□ -0.98
LSM7-202ENST00000585395 C10orf95Q9H7T3 257 aa8.87□□□□□ -0.99
LSM7-202ENST00000585395 DSTQ03001 7570 aaKnown RBP8.86□□□□□ -0.99
LSM7-202ENST00000585395 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
LSM7-202ENST00000585395 KRTAP4-9Q9BYQ8 210 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms