RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
CASC3-209ENST00000583902 A8MUN3 132 aa4.78□□□□□ -1.64
CASC3-209ENST00000583902 PCP4P48539 62 aa4.78□□□□□ -1.64
CASC3-209ENST00000583902 RBM12B-AS1Q9P1G2 102 aa4.78□□□□□ -1.64
CASC3-209ENST00000583902 SNURFQ9Y675 71 aa4.77□□□□□ -1.65
CASC3-209ENST00000583902 CCDC179H3BU77 68 aa4.75□□□□□ -1.65
CASC3-209ENST00000583902 ATP5EP56381 51 aaPredicted RBP4.75□□□□□ -1.65
CASC3-209ENST00000583902 HRES1P13985 223 aa4.74□□□□□ -1.65
CASC3-209ENST00000583902 LRP2P98164 4655 aa4.74□□□□□ -1.65
CASC3-209ENST00000583902 H7BZZ5 65 aa4.73□□□□□ -1.65
CASC3-209ENST00000583902 TMEM258P61165 79 aa4.73□□□□□ -1.65
CASC3-209ENST00000583902 COX6B2Q6YFQ2 88 aa4.73□□□□□ -1.65
CASC3-209ENST00000583902 MPLKIPQ8TAP9 179 aa4.73□□□□□ -1.65
CASC3-209ENST00000583902 LPAP08519 4548 aa4.71□□□□□ -1.65
CASC3-209ENST00000583902 DMAC1Q96GE9 116 aa4.7□□□□□ -1.66
CASC3-209ENST00000583902 ACYP2P14621 99 aa4.69□□□□□ -1.66
CASC3-209ENST00000583902 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
CASC3-209ENST00000583902 C4orf26Q17RF5 130 aa4.68□□□□□ -1.66
CASC3-209ENST00000583902 FAM236DA0A1B0GTK5 79 aa4.67□□□□□ -1.66
CASC3-209ENST00000583902 FAM236CP0DP71 79 aa4.67□□□□□ -1.66
CASC3-209ENST00000583902 H1FX-AS1Q4G0G2 97 aa4.67□□□□□ -1.66
CASC3-209ENST00000583902 KRTAP4-1Q9BYQ7 146 aa4.67□□□□□ -1.66
CASC3-209ENST00000583902 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.67
CASC3-209ENST00000583902 MUC17Q685J3 4493 aa4.64□□□□□ -1.67
CASC3-209ENST00000583902 CYSTM1Q9H1C7 97 aa4.64□□□□□ -1.67
CASC3-209ENST00000583902 SPTSSBQ8NFR3 76 aa4.62□□□□□ -1.67
CASC3-209ENST00000583902 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
CASC3-209ENST00000583902 RNF213Q63HN8 5207 aa4.59□□□□□ -1.68
CASC3-209ENST00000583902 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
CASC3-209ENST00000583902 CHKB-CPT1BH3BT56 60 aa4.57□□□□□ -1.68
CASC3-209ENST00000583902 S4R3F8 94 aa4.57□□□□□ -1.68
CASC3-209ENST00000583902 SERP1Q9Y6X1 66 aa4.56□□□□□ -1.68
CASC3-209ENST00000583902 COA5Q86WW8 74 aa4.55□□□□□ -1.68
CASC3-209ENST00000583902 RPS28P62857 69 aaKnown RBP4.54□□□□□ -1.68
CASC3-209ENST00000583902 CSAG1Q6PB30 78 aa4.54□□□□□ -1.68
CASC3-209ENST00000583902 LCA10Q71F78 164 aa4.51□□□□□ -1.69
CASC3-209ENST00000583902 H0YAA0 97 aa4.47□□□□□ -1.69
CASC3-209ENST00000583902 MT1HP80294 61 aa4.46□□□□□ -1.7
CASC3-209ENST00000583902 V9GYY9 64 aa4.46□□□□□ -1.7
CASC3-209ENST00000583902 M0R2T5 61 aa4.45□□□□□ -1.7
CASC3-209ENST00000583902 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
CASC3-209ENST00000583902 SEC61GP60059 68 aa4.43□□□□□ -1.7
CASC3-209ENST00000583902 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
CASC3-209ENST00000583902 MUC2Q02817 5179 aa4.41□□□□□ -1.7
CASC3-209ENST00000583902 PRR15LQ9BU68 103 aa4.41□□□□□ -1.7
CASC3-209ENST00000583902 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
CASC3-209ENST00000583902 Q1T7F1 81 aa4.38□□□□□ -1.71
CASC3-209ENST00000583902 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
CASC3-209ENST00000583902 CRIPTQ9P021 101 aa4.36□□□□□ -1.71
CASC3-209ENST00000583902 A0A1B0GU69 56 aa4.35□□□□□ -1.71
CASC3-209ENST00000583902 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
CASC3-209ENST00000583902 ADM2Q7Z4H4 148 aa4.31□□□□□ -1.72
CASC3-209ENST00000583902 FAT4Q6V0I7 4981 aa4.3□□□□□ -1.72
CASC3-209ENST00000583902 M0QZ58 72 aa4.29□□□□□ -1.72
CASC3-209ENST00000583902 A0A1B0GU33 70 aa4.25□□□□□ -1.73
CASC3-209ENST00000583902 MT2AP02795 61 aa4.24□□□□□ -1.73
CASC3-209ENST00000583902 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
CASC3-209ENST00000583902 R4GN34 69 aa4.24□□□□□ -1.73
CASC3-209ENST00000583902 UQCR11O14957 56 aa4.23□□□□□ -1.73
CASC3-209ENST00000583902 P0C880 135 aa4.23□□□□□ -1.73
CASC3-209ENST00000583902 Q5VV11 94 aa4.23□□□□□ -1.73
CASC3-209ENST00000583902 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
CASC3-209ENST00000583902 PSPHP1O15172 72 aa4.2□□□□□ -1.74
CASC3-209ENST00000583902 MT1FP04733 61 aa4.2□□□□□ -1.74
CASC3-209ENST00000583902 SPRR2GQ9BYE4 73 aa4.19□□□□□ -1.74
CASC3-209ENST00000583902 A6NN06 94 aa4.16□□□□□ -1.74
CASC3-209ENST00000583902 A6NED7 52 aa4.14□□□□□ -1.75
CASC3-209ENST00000583902 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
CASC3-209ENST00000583902 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
CASC3-209ENST00000583902 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
CASC3-209ENST00000583902 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
CASC3-209ENST00000583902 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
CASC3-209ENST00000583902 K7ERS5 55 aa4.07□□□□□ -1.76
CASC3-209ENST00000583902 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
CASC3-209ENST00000583902 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
CASC3-209ENST00000583902 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
CASC3-209ENST00000583902 A0A0D9SG42 100 aa4.01□□□□□ -1.77
CASC3-209ENST00000583902 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
CASC3-209ENST00000583902 A8MU10 97 aa3.98□□□□□ -1.77
CASC3-209ENST00000583902 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
CASC3-209ENST00000583902 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
CASC3-209ENST00000583902 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
CASC3-209ENST00000583902 MT1BP07438 61 aa3.96□□□□□ -1.78
CASC3-209ENST00000583902 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
CASC3-209ENST00000583902 CAMK2N1Q7Z7J9 78 aa3.94□□□□□ -1.78
CASC3-209ENST00000583902 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
CASC3-209ENST00000583902 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
CASC3-209ENST00000583902 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
CASC3-209ENST00000583902 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
CASC3-209ENST00000583902 MT1XP80297 61 aa3.81□□□□□ -1.8
CASC3-209ENST00000583902 ROMO1P60602 79 aa3.79□□□□□ -1.8
CASC3-209ENST00000583902 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
CASC3-209ENST00000583902 TNP1P09430 55 aa3.77□□□□□ -1.81
CASC3-209ENST00000583902 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
CASC3-209ENST00000583902 C10orf95Q9H7T3 257 aa3.75□□□□□ -1.81
CASC3-209ENST00000583902 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
CASC3-209ENST00000583902 MT3P25713 68 aa3.69□□□□□ -1.82
CASC3-209ENST00000583902 USH2AO75445 5202 aa3.69□□□□□ -1.82
CASC3-209ENST00000583902 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
CASC3-209ENST00000583902 KRTAP10-12P60413 245 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms