RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
UBBP4-201ENST00000583708 ACYP2P14621 99 aa4.49□□□□□ -1.69
UBBP4-201ENST00000583708 SNURFQ9Y675 71 aa4.49□□□□□ -1.69
UBBP4-201ENST00000583708 LCA10Q71F78 164 aa4.46□□□□□ -1.7
UBBP4-201ENST00000583708 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
UBBP4-201ENST00000583708 SPTSSBQ8NFR3 76 aa4.43□□□□□ -1.7
UBBP4-201ENST00000583708 H0YAA0 97 aa4.41□□□□□ -1.7
UBBP4-201ENST00000583708 H7BZZ5 65 aa4.4□□□□□ -1.71
UBBP4-201ENST00000583708 MT2AP02795 61 aa4.4□□□□□ -1.71
UBBP4-201ENST00000583708 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
UBBP4-201ENST00000583708 CHKB-CPT1BH3BT56 60 aa4.37□□□□□ -1.71
UBBP4-201ENST00000583708 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
UBBP4-201ENST00000583708 CRIPTQ9P021 101 aa4.36□□□□□ -1.71
UBBP4-201ENST00000583708 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
UBBP4-201ENST00000583708 MT1FP04733 61 aa4.34□□□□□ -1.71
UBBP4-201ENST00000583708 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
UBBP4-201ENST00000583708 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
UBBP4-201ENST00000583708 CYSTM1Q9H1C7 97 aa4.31□□□□□ -1.72
UBBP4-201ENST00000583708 TMEM258P61165 79 aa4.3□□□□□ -1.72
UBBP4-201ENST00000583708 COA5Q86WW8 74 aa4.29□□□□□ -1.72
UBBP4-201ENST00000583708 ADM2Q7Z4H4 148 aa4.26□□□□□ -1.73
UBBP4-201ENST00000583708 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
UBBP4-201ENST00000583708 SEC61GP60059 68 aa4.22□□□□□ -1.73
UBBP4-201ENST00000583708 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
UBBP4-201ENST00000583708 SERP1Q9Y6X1 66 aa4.19□□□□□ -1.74
UBBP4-201ENST00000583708 M0QZ58 72 aa4.18□□□□□ -1.74
UBBP4-201ENST00000583708 PCP4P48539 62 aa4.18□□□□□ -1.74
UBBP4-201ENST00000583708 R4GN34 69 aa4.18□□□□□ -1.74
UBBP4-201ENST00000583708 P0C880 135 aa4.17□□□□□ -1.74
UBBP4-201ENST00000583708 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
UBBP4-201ENST00000583708 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
UBBP4-201ENST00000583708 Q5VV11 94 aa4.15□□□□□ -1.75
UBBP4-201ENST00000583708 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.75
UBBP4-201ENST00000583708 SVIPQ8NHG7 77 aa4.14□□□□□ -1.75
UBBP4-201ENST00000583708 USH2AO75445 5202 aa4.14□□□□□ -1.75
UBBP4-201ENST00000583708 PRR15LQ9BU68 103 aa4.12□□□□□ -1.75
UBBP4-201ENST00000583708 A0A1B0GU69 56 aa4.11□□□□□ -1.75
UBBP4-201ENST00000583708 RPS28P62857 69 aaKnown RBP4.09□□□□□ -1.75
UBBP4-201ENST00000583708 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
UBBP4-201ENST00000583708 V9GYY9 64 aa4.09□□□□□ -1.75
UBBP4-201ENST00000583708 A6NN06 94 aa4.08□□□□□ -1.76
UBBP4-201ENST00000583708 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
UBBP4-201ENST00000583708 A0A1B0GU33 70 aa4.07□□□□□ -1.76
UBBP4-201ENST00000583708 MT1BP07438 61 aa4.07□□□□□ -1.76
UBBP4-201ENST00000583708 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
UBBP4-201ENST00000583708 SMIM26A0A096LP01 95 aa4.03□□□□□ -1.76
UBBP4-201ENST00000583708 FSIP2Q5CZC0 6907 aa4.03□□□□□ -1.76
UBBP4-201ENST00000583708 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
UBBP4-201ENST00000583708 Q1T7F1 81 aa4.01□□□□□ -1.77
UBBP4-201ENST00000583708 LINC01554Q52M75 96 aa4.01□□□□□ -1.77
UBBP4-201ENST00000583708 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
UBBP4-201ENST00000583708 UQCR11O14957 56 aa3.97□□□□□ -1.77
UBBP4-201ENST00000583708 KRTAP10-5P60370 271 aa3.97□□□□□ -1.77
UBBP4-201ENST00000583708 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
UBBP4-201ENST00000583708 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
UBBP4-201ENST00000583708 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
UBBP4-201ENST00000583708 A0A0D9SG42 100 aa3.89□□□□□ -1.79
UBBP4-201ENST00000583708 MT1XP80297 61 aa3.88□□□□□ -1.79
UBBP4-201ENST00000583708 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
UBBP4-201ENST00000583708 PSPHP1O15172 72 aa3.86□□□□□ -1.79
UBBP4-201ENST00000583708 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
UBBP4-201ENST00000583708 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
UBBP4-201ENST00000583708 SPINT4Q6UDR6 99 aa3.85□□□□□ -1.79
UBBP4-201ENST00000583708 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
UBBP4-201ENST00000583708 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
UBBP4-201ENST00000583708 A8MU10 97 aa3.82□□□□□ -1.8
UBBP4-201ENST00000583708 K7ERS5 55 aa3.82□□□□□ -1.8
UBBP4-201ENST00000583708 A6NED7 52 aa3.8□□□□□ -1.8
UBBP4-201ENST00000583708 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
UBBP4-201ENST00000583708 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
UBBP4-201ENST00000583708 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
UBBP4-201ENST00000583708 CDC42SE1Q9NRR8 79 aa3.72□□□□□ -1.81
UBBP4-201ENST00000583708 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
UBBP4-201ENST00000583708 TNP1P09430 55 aa3.68□□□□□ -1.82
UBBP4-201ENST00000583708 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
UBBP4-201ENST00000583708 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
UBBP4-201ENST00000583708 KRTAP4-6Q9BYQ5 205 aa3.67□□□□□ -1.82
UBBP4-201ENST00000583708 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
UBBP4-201ENST00000583708 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
UBBP4-201ENST00000583708 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
UBBP4-201ENST00000583708 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
UBBP4-201ENST00000583708 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
UBBP4-201ENST00000583708 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
UBBP4-201ENST00000583708 KRTAP4-8Q9BYQ9 185 aa3.58□□□□□ -1.84
UBBP4-201ENST00000583708 H3BS24 57 aa3.57□□□□□ -1.84
UBBP4-201ENST00000583708 KMT2DO14686 5537 aa3.57□□□□□ -1.84
UBBP4-201ENST00000583708 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
UBBP4-201ENST00000583708 ROMO1P60602 79 aa3.55□□□□□ -1.84
UBBP4-201ENST00000583708 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
UBBP4-201ENST00000583708 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
UBBP4-201ENST00000583708 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
UBBP4-201ENST00000583708 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
UBBP4-201ENST00000583708 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
UBBP4-201ENST00000583708 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
UBBP4-201ENST00000583708 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
UBBP4-201ENST00000583708 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
UBBP4-201ENST00000583708 SPRR2EP22531 72 aa3.44□□□□□ -1.86
UBBP4-201ENST00000583708 SPRR2BP35325 72 aa3.44□□□□□ -1.86
UBBP4-201ENST00000583708 SPRR2AP35326 72 aa3.44□□□□□ -1.86
UBBP4-201ENST00000583708 NEBP20929 6669 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms