RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
MKS1-212ENST00000583577 RPS29P62273 56 aaKnown RBP5.55□□□□□ -1.52
MKS1-212ENST00000583577 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
MKS1-212ENST00000583577 Q5W150 140 aa5.54□□□□□ -1.52
MKS1-212ENST00000583577 LCA10Q71F78 164 aa5.54□□□□□ -1.52
MKS1-212ENST00000583577 SEC61GP60059 68 aa5.53□□□□□ -1.52
MKS1-212ENST00000583577 A6NN06 94 aa5.51□□□□□ -1.53
MKS1-212ENST00000583577 SPINK1P00995 79 aa5.51□□□□□ -1.53
MKS1-212ENST00000583577 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
MKS1-212ENST00000583577 KRTAP16-1A8MUX0 517 aa5.49□□□□□ -1.53
MKS1-212ENST00000583577 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
MKS1-212ENST00000583577 A0A1B0GU69 56 aa5.47□□□□□ -1.53
MKS1-212ENST00000583577 C7orf65Q6ZTY9 151 aa5.47□□□□□ -1.53
MKS1-212ENST00000583577 RETNLBQ9BQ08 111 aa5.46□□□□□ -1.54
MKS1-212ENST00000583577 IGKV2D-30A0A075B6S6 120 aa5.44□□□□□ -1.54
MKS1-212ENST00000583577 SPINK7P58062 85 aa5.44□□□□□ -1.54
MKS1-212ENST00000583577 USH2AO75445 5202 aa5.43□□□□□ -1.54
MKS1-212ENST00000583577 UQCR11O14957 56 aa5.43□□□□□ -1.54
MKS1-212ENST00000583577 SPATA8Q6RVD6 105 aa5.43□□□□□ -1.54
MKS1-212ENST00000583577 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
MKS1-212ENST00000583577 A8MU10 97 aa5.4□□□□□ -1.54
MKS1-212ENST00000583577 TPRXLQ17RH7 258 aa5.4□□□□□ -1.54
MKS1-212ENST00000583577 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.54
MKS1-212ENST00000583577 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
MKS1-212ENST00000583577 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
MKS1-212ENST00000583577 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
MKS1-212ENST00000583577 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.55
MKS1-212ENST00000583577 MT1HP80294 61 aa5.34□□□□□ -1.55
MKS1-212ENST00000583577 KRTAP10-6P60371 365 aaPredicted RBP5.33□□□□□ -1.56
MKS1-212ENST00000583577 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
MKS1-212ENST00000583577 MACF1Q9UPN3 7388 aaKnown RBP5.32□□□□□ -1.56
MKS1-212ENST00000583577 C20orf166-AS1Q96NR2 134 aa5.31□□□□□ -1.56
MKS1-212ENST00000583577 A8MUU9 505 aa5.3□□□□□ -1.56
MKS1-212ENST00000583577 FLGP20930 4061 aaPredicted RBP5.28□□□□□ -1.56
MKS1-212ENST00000583577 SEC61BP60468 96 aaKnown RBP5.27□□□□□ -1.57
MKS1-212ENST00000583577 C9orf92A6NGG3 77 aa5.26□□□□□ -1.57
MKS1-212ENST00000583577 M0R2T5 61 aa5.25□□□□□ -1.57
MKS1-212ENST00000583577 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
MKS1-212ENST00000583577 XP32Q5T750 250 aa5.24□□□□□ -1.57
MKS1-212ENST00000583577 COX6B2Q6YFQ2 88 aa5.16□□□□□ -1.58
MKS1-212ENST00000583577 A0A1B0GU33 70 aa5.15□□□□□ -1.59
MKS1-212ENST00000583577 K7ERS5 55 aa5.14□□□□□ -1.59
MKS1-212ENST00000583577 RPL37P61927 97 aaKnown RBP5.14□□□□□ -1.59
MKS1-212ENST00000583577 H1FX-AS1Q4G0G2 97 aa5.13□□□□□ -1.59
MKS1-212ENST00000583577 LINC01554Q52M75 96 aa5.13□□□□□ -1.59
MKS1-212ENST00000583577 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
MKS1-212ENST00000583577 NEBP20929 6669 aa5.11□□□□□ -1.59
MKS1-212ENST00000583577 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
MKS1-212ENST00000583577 H0YAA0 97 aa5.07□□□□□ -1.6
MKS1-212ENST00000583577 PRAC1Q96KF2 57 aa5.06□□□□□ -1.6
MKS1-212ENST00000583577 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
MKS1-212ENST00000583577 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
MKS1-212ENST00000583577 CSAG1Q6PB30 78 aa5.02□□□□□ -1.61
MKS1-212ENST00000583577 ADM2Q7Z4H4 148 aa5.02□□□□□ -1.61
MKS1-212ENST00000583577 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
MKS1-212ENST00000583577 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
MKS1-212ENST00000583577 LCE2BO14633 110 aa4.94□□□□□ -1.62
MKS1-212ENST00000583577 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
MKS1-212ENST00000583577 S4R3F8 94 aa4.94□□□□□ -1.62
MKS1-212ENST00000583577 ROMO1P60602 79 aa4.92□□□□□ -1.62
MKS1-212ENST00000583577 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
MKS1-212ENST00000583577 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.63
MKS1-212ENST00000583577 KRTAP3-2Q9BYR7 98 aa4.84□□□□□ -1.63
MKS1-212ENST00000583577 M0QZ58 72 aa4.83□□□□□ -1.64
MKS1-212ENST00000583577 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
MKS1-212ENST00000583577 MT2AP02795 61 aa4.82□□□□□ -1.64
MKS1-212ENST00000583577 KMT2DO14686 5537 aa4.81□□□□□ -1.64
MKS1-212ENST00000583577 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
MKS1-212ENST00000583577 MT1FP04733 61 aa4.79□□□□□ -1.64
MKS1-212ENST00000583577 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
MKS1-212ENST00000583577 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
MKS1-212ENST00000583577 CRIPTQ9P021 101 aa4.74□□□□□ -1.65
MKS1-212ENST00000583577 P0C880 135 aa4.71□□□□□ -1.66
MKS1-212ENST00000583577 A0A0D9SG42 100 aa4.7□□□□□ -1.66
MKS1-212ENST00000583577 KRTAP12-1P59990 96 aa4.68□□□□□ -1.66
MKS1-212ENST00000583577 GPR98Q8WXG9 6306 aa4.66□□□□□ -1.66
MKS1-212ENST00000583577 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
MKS1-212ENST00000583577 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
MKS1-212ENST00000583577 KRTAP12-2P59991 146 aa4.64□□□□□ -1.67
MKS1-212ENST00000583577 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
MKS1-212ENST00000583577 H3BS24 57 aa4.6□□□□□ -1.67
MKS1-212ENST00000583577 R4GN34 69 aa4.58□□□□□ -1.68
MKS1-212ENST00000583577 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
MKS1-212ENST00000583577 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
MKS1-212ENST00000583577 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
MKS1-212ENST00000583577 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
MKS1-212ENST00000583577 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
MKS1-212ENST00000583577 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
MKS1-212ENST00000583577 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
MKS1-212ENST00000583577 SPRR2EP22531 72 aa4.38□□□□□ -1.71
MKS1-212ENST00000583577 SPRR2BP35325 72 aa4.38□□□□□ -1.71
MKS1-212ENST00000583577 SPRR2AP35326 72 aa4.38□□□□□ -1.71
MKS1-212ENST00000583577 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
MKS1-212ENST00000583577 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
MKS1-212ENST00000583577 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
MKS1-212ENST00000583577 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
MKS1-212ENST00000583577 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
MKS1-212ENST00000583577 TNP1P09430 55 aa4.26□□□□□ -1.73
MKS1-212ENST00000583577 SPRR2DP22532 72 aa4.24□□□□□ -1.73
MKS1-212ENST00000583577 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms