RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SPANXA2-OT1Q8N9U9 137 aa8.08□□□□□ -1.12
CDK5RAP3-228ENST00000583363 A8MUN3 132 aa8.07□□□□□ -1.12
CDK5RAP3-228ENST00000583363 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
CDK5RAP3-228ENST00000583363 DMAC1Q96GE9 116 aa8.05□□□□□ -1.12
CDK5RAP3-228ENST00000583363 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
CDK5RAP3-228ENST00000583363 TMEM258P61165 79 aa8□□□□□ -1.13
CDK5RAP3-228ENST00000583363 ACYP2P14621 99 aa7.98□□□□□ -1.13
CDK5RAP3-228ENST00000583363 S4R3F8 94 aa7.96□□□□□ -1.14
CDK5RAP3-228ENST00000583363 ATP5EP56381 51 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-228ENST00000583363 M0R2T5 61 aa7.93□□□□□ -1.14
CDK5RAP3-228ENST00000583363 LCA10Q71F78 164 aa7.93□□□□□ -1.14
CDK5RAP3-228ENST00000583363 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
CDK5RAP3-228ENST00000583363 CSAG1Q6PB30 78 aa7.85□□□□□ -1.15
CDK5RAP3-228ENST00000583363 KRTAP9-7A8MTY7 169 aa7.81□□□□□ -1.16
CDK5RAP3-228ENST00000583363 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-228ENST00000583363 COA5Q86WW8 74 aa7.81□□□□□ -1.16
CDK5RAP3-228ENST00000583363 CHKB-CPT1BH3BT56 60 aa7.8□□□□□ -1.16
CDK5RAP3-228ENST00000583363 SSPOA2VEC9 5147 aa7.75□□□□□ -1.17
CDK5RAP3-228ENST00000583363 SPTSSBQ8NFR3 76 aa7.74□□□□□ -1.17
CDK5RAP3-228ENST00000583363 SERP1Q9Y6X1 66 aa7.74□□□□□ -1.17
CDK5RAP3-228ENST00000583363 USH2AO75445 5202 aa7.73□□□□□ -1.17
CDK5RAP3-228ENST00000583363 KRTAP9-8Q9BYQ0 159 aa7.72□□□□□ -1.17
CDK5RAP3-228ENST00000583363 RPS28P62857 69 aaKnown RBP7.66□□□□□ -1.18
CDK5RAP3-228ENST00000583363 MT2AP02795 61 aa7.65□□□□□ -1.18
CDK5RAP3-228ENST00000583363 H0YAA0 97 aa7.64□□□□□ -1.19
CDK5RAP3-228ENST00000583363 FCGBPQ9Y6R7 5405 aaPredicted RBP7.61□□□□□ -1.19
CDK5RAP3-228ENST00000583363 MT1FP04733 61 aa7.59□□□□□ -1.19
CDK5RAP3-228ENST00000583363 ADM2Q7Z4H4 148 aa7.58□□□□□ -1.2
CDK5RAP3-228ENST00000583363 KRTAP10-10P60014 251 aa7.57□□□□□ -1.2
CDK5RAP3-228ENST00000583363 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
CDK5RAP3-228ENST00000583363 SMIM26A0A096LP01 95 aa7.51□□□□□ -1.21
CDK5RAP3-228ENST00000583363 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
CDK5RAP3-228ENST00000583363 LCE2BO14633 110 aa7.49□□□□□ -1.21
CDK5RAP3-228ENST00000583363 P0C880 135 aa7.49□□□□□ -1.21
CDK5RAP3-228ENST00000583363 MACF1Q9UPN3 7388 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP3-228ENST00000583363 SYNE2Q8WXH0 6885 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP3-228ENST00000583363 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
CDK5RAP3-228ENST00000583363 SEC61GP60059 68 aa7.45□□□□□ -1.22
CDK5RAP3-228ENST00000583363 LINC01558Q9Y6Z2 57 aa7.44□□□□□ -1.22
CDK5RAP3-228ENST00000583363 CRIPTQ9P021 101 aa7.43□□□□□ -1.22
CDK5RAP3-228ENST00000583363 Q1T7F1 81 aa7.4□□□□□ -1.22
CDK5RAP3-228ENST00000583363 V9GYY9 64 aa7.4□□□□□ -1.22
CDK5RAP3-228ENST00000583363 A0A1B0GU69 56 aa7.39□□□□□ -1.23
CDK5RAP3-228ENST00000583363 SPRR2GQ9BYE4 73 aa7.35□□□□□ -1.23
CDK5RAP3-228ENST00000583363 PRR15LQ9BU68 103 aa7.33□□□□□ -1.24
CDK5RAP3-228ENST00000583363 R4GN34 69 aa7.31□□□□□ -1.24
CDK5RAP3-228ENST00000583363 A0A1B0GU33 70 aa7.29□□□□□ -1.24
CDK5RAP3-228ENST00000583363 M0QZ58 72 aa7.29□□□□□ -1.24
CDK5RAP3-228ENST00000583363 KRTAP19-6Q3LI70 58 aa7.27□□□□□ -1.25
CDK5RAP3-228ENST00000583363 KRTAP13-4Q3LI77 160 aa7.23□□□□□ -1.25
CDK5RAP3-228ENST00000583363 PSPHP1O15172 72 aa7.22□□□□□ -1.25
CDK5RAP3-228ENST00000583363 KRTAP19-8Q3LI54 63 aa7.21□□□□□ -1.26
CDK5RAP3-228ENST00000583363 Q5VV11 94 aa7.21□□□□□ -1.26
CDK5RAP3-228ENST00000583363 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
CDK5RAP3-228ENST00000583363 KRTAP6-3Q3LI67 103 aa7.16□□□□□ -1.26
CDK5RAP3-228ENST00000583363 LINC01554Q52M75 96 aa7.15□□□□□ -1.26
CDK5RAP3-228ENST00000583363 MT1BP07438 61 aa7.13□□□□□ -1.27
CDK5RAP3-228ENST00000583363 UQCR11O14957 56 aa7.11□□□□□ -1.27
CDK5RAP3-228ENST00000583363 NEBP20929 6669 aa7.05□□□□□ -1.28
CDK5RAP3-228ENST00000583363 A0A0D9SG42 100 aa7.05□□□□□ -1.28
CDK5RAP3-228ENST00000583363 A6NN06 94 aa7.05□□□□□ -1.28
CDK5RAP3-228ENST00000583363 PLAC4Q8WY50 150 aa7.03□□□□□ -1.28
CDK5RAP3-228ENST00000583363 A6NED7 52 aa7.02□□□□□ -1.29
CDK5RAP3-228ENST00000583363 A8MU10 97 aa7.02□□□□□ -1.29
CDK5RAP3-228ENST00000583363 MIR22HGQ0VDD5 57 aa7.01□□□□□ -1.29
CDK5RAP3-228ENST00000583363 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
CDK5RAP3-228ENST00000583363 MUC12Q9UKN1 5478 aa6.92□□□□□ -1.3
CDK5RAP3-228ENST00000583363 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
CDK5RAP3-228ENST00000583363 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
CDK5RAP3-228ENST00000583363 KRTAP12-2P59991 146 aa6.9□□□□□ -1.3
CDK5RAP3-228ENST00000583363 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
CDK5RAP3-228ENST00000583363 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
CDK5RAP3-228ENST00000583363 MT1XP80297 61 aa6.82□□□□□ -1.32
CDK5RAP3-228ENST00000583363 KRTAP20-1Q3LI63 56 aa6.8□□□□□ -1.32
CDK5RAP3-228ENST00000583363 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
CDK5RAP3-228ENST00000583363 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
CDK5RAP3-228ENST00000583363 K7ERS5 55 aa6.74□□□□□ -1.33
CDK5RAP3-228ENST00000583363 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
CDK5RAP3-228ENST00000583363 KMT2DO14686 5537 aa6.66□□□□□ -1.34
CDK5RAP3-228ENST00000583363 MDN1Q9NU22 5596 aa6.66□□□□□ -1.34
CDK5RAP3-228ENST00000583363 PRO0628Q9UI54 55 aa6.64□□□□□ -1.35
CDK5RAP3-228ENST00000583363 C10orf95Q9H7T3 257 aa6.61□□□□□ -1.35
CDK5RAP3-228ENST00000583363 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
CDK5RAP3-228ENST00000583363 KRTAP2-3P0C7H8 128 aa6.52□□□□□ -1.37
CDK5RAP3-228ENST00000583363 KRTAP2-4Q9BYR9 128 aa6.52□□□□□ -1.37
CDK5RAP3-228ENST00000583363 KRTAP10-12P60413 245 aa6.49□□□□□ -1.37
CDK5RAP3-228ENST00000583363 TNP1P09430 55 aa6.45□□□□□ -1.38
CDK5RAP3-228ENST00000583363 PMAIP1Q13794 54 aa6.44□□□□□ -1.38
CDK5RAP3-228ENST00000583363 ROMO1P60602 79 aa6.43□□□□□ -1.38
CDK5RAP3-228ENST00000583363 SPRR2EP22531 72 aa6.38□□□□□ -1.39
CDK5RAP3-228ENST00000583363 SPRR2BP35325 72 aa6.38□□□□□ -1.39
CDK5RAP3-228ENST00000583363 SPRR2AP35326 72 aa6.38□□□□□ -1.39
CDK5RAP3-228ENST00000583363 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
CDK5RAP3-228ENST00000583363 KRTAP25-1Q3LHN0 102 aa6.37□□□□□ -1.39
CDK5RAP3-228ENST00000583363 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
CDK5RAP3-228ENST00000583363 KRTAP4-8Q9BYQ9 185 aa6.36□□□□□ -1.39
CDK5RAP3-228ENST00000583363 SVIPQ8NHG7 77 aa6.35□□□□□ -1.39
CDK5RAP3-228ENST00000583363 KRTAP2-2Q9BYT5 123 aa6.29□□□□□ -1.4
CDK5RAP3-228ENST00000583363 KRTAP2-1Q9BYU5 128 aa6.29□□□□□ -1.4
CDK5RAP3-228ENST00000583363 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms