RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
GGA3-216ENST00000583282 CSAG1Q6PB30 78 aa6.64□□□□□ -1.35
GGA3-216ENST00000583282 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
GGA3-216ENST00000583282 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
GGA3-216ENST00000583282 NDUFC1O43677 76 aa6.6□□□□□ -1.35
GGA3-216ENST00000583282 LCE2DQ5TA82 110 aaPredicted RBP6.59□□□□□ -1.35
GGA3-216ENST00000583282 CYSTM1Q9H1C7 97 aa6.56□□□□□ -1.36
GGA3-216ENST00000583282 SPANXA2-OT1Q8N9U9 137 aa6.54□□□□□ -1.36
GGA3-216ENST00000583282 ACYP2P14621 99 aa6.53□□□□□ -1.36
GGA3-216ENST00000583282 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
GGA3-216ENST00000583282 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
GGA3-216ENST00000583282 H7BZZ5 65 aa6.49□□□□□ -1.37
GGA3-216ENST00000583282 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
GGA3-216ENST00000583282 ADM2Q7Z4H4 148 aa6.43□□□□□ -1.38
GGA3-216ENST00000583282 LCE2BO14633 110 aa6.41□□□□□ -1.38
GGA3-216ENST00000583282 COA5Q86WW8 74 aa6.41□□□□□ -1.38
GGA3-216ENST00000583282 H0YAA0 97 aa6.4□□□□□ -1.38
GGA3-216ENST00000583282 SPTSSBQ8NFR3 76 aa6.4□□□□□ -1.38
GGA3-216ENST00000583282 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
GGA3-216ENST00000583282 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
GGA3-216ENST00000583282 P0C880 135 aa6.32□□□□□ -1.4
GGA3-216ENST00000583282 CRCT1Q9UGL9 99 aa6.32□□□□□ -1.4
GGA3-216ENST00000583282 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
GGA3-216ENST00000583282 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
GGA3-216ENST00000583282 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
GGA3-216ENST00000583282 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
GGA3-216ENST00000583282 USH2AO75445 5202 aa6.28□□□□□ -1.4
GGA3-216ENST00000583282 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
GGA3-216ENST00000583282 TMEM258P61165 79 aa6.25□□□□□ -1.41
GGA3-216ENST00000583282 R4GN34 69 aa6.22□□□□□ -1.41
GGA3-216ENST00000583282 M0QZ58 72 aa6.21□□□□□ -1.42
GGA3-216ENST00000583282 Q5VV11 94 aa6.21□□□□□ -1.42
GGA3-216ENST00000583282 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
GGA3-216ENST00000583282 MT1BP07438 61 aa6.18□□□□□ -1.42
GGA3-216ENST00000583282 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
GGA3-216ENST00000583282 LINC01554Q52M75 96 aa6.14□□□□□ -1.43
GGA3-216ENST00000583282 SEC61GP60059 68 aa6.13□□□□□ -1.43
GGA3-216ENST00000583282 PCP4P48539 62 aa6.12□□□□□ -1.43
GGA3-216ENST00000583282 SERP1Q9Y6X1 66 aa6.11□□□□□ -1.43
GGA3-216ENST00000583282 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
GGA3-216ENST00000583282 A0A1B0GU69 56 aa6.06□□□□□ -1.44
GGA3-216ENST00000583282 KRTAP13-4Q3LI77 160 aa6.05□□□□□ -1.44
GGA3-216ENST00000583282 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
GGA3-216ENST00000583282 A6NN06 94 aa6□□□□□ -1.45
GGA3-216ENST00000583282 A0A1B0GU33 70 aa5.98□□□□□ -1.45
GGA3-216ENST00000583282 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
GGA3-216ENST00000583282 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
GGA3-216ENST00000583282 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
GGA3-216ENST00000583282 PRR15LQ9BU68 103 aa5.96□□□□□ -1.46
GGA3-216ENST00000583282 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
GGA3-216ENST00000583282 A0A0D9SG42 100 aa5.94□□□□□ -1.46
GGA3-216ENST00000583282 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
GGA3-216ENST00000583282 MT1XP80297 61 aa5.88□□□□□ -1.47
GGA3-216ENST00000583282 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
GGA3-216ENST00000583282 A8MU10 97 aa5.83□□□□□ -1.48
GGA3-216ENST00000583282 SMIM26A0A096LP01 95 aa5.81□□□□□ -1.48
GGA3-216ENST00000583282 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
GGA3-216ENST00000583282 V9GYY9 64 aa5.81□□□□□ -1.48
GGA3-216ENST00000583282 PSPHP1O15172 72 aa5.8□□□□□ -1.48
GGA3-216ENST00000583282 CAMK2N1Q7Z7J9 78 aa5.79□□□□□ -1.48
GGA3-216ENST00000583282 Q1T7F1 81 aa5.78□□□□□ -1.48
GGA3-216ENST00000583282 MACF1Q9UPN3 7388 aaKnown RBP5.77□□□□□ -1.49
GGA3-216ENST00000583282 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
GGA3-216ENST00000583282 UQCR11O14957 56 aa5.75□□□□□ -1.49
GGA3-216ENST00000583282 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
GGA3-216ENST00000583282 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
GGA3-216ENST00000583282 KRTAP9-7A8MTY7 169 aa5.72□□□□□ -1.49
GGA3-216ENST00000583282 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
GGA3-216ENST00000583282 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
GGA3-216ENST00000583282 A6NED7 52 aa5.62□□□□□ -1.51
GGA3-216ENST00000583282 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
GGA3-216ENST00000583282 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
GGA3-216ENST00000583282 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
GGA3-216ENST00000583282 KMT2DO14686 5537 aa5.53□□□□□ -1.52
GGA3-216ENST00000583282 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
GGA3-216ENST00000583282 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
GGA3-216ENST00000583282 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
GGA3-216ENST00000583282 K7ERS5 55 aa5.5□□□□□ -1.53
GGA3-216ENST00000583282 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
GGA3-216ENST00000583282 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
GGA3-216ENST00000583282 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
GGA3-216ENST00000583282 TNP1P09430 55 aa5.4□□□□□ -1.54
GGA3-216ENST00000583282 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
GGA3-216ENST00000583282 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
GGA3-216ENST00000583282 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
GGA3-216ENST00000583282 SPRR2EP22531 72 aa5.29□□□□□ -1.56
GGA3-216ENST00000583282 SPRR2BP35325 72 aa5.29□□□□□ -1.56
GGA3-216ENST00000583282 SPRR2AP35326 72 aa5.29□□□□□ -1.56
GGA3-216ENST00000583282 NEBP20929 6669 aa5.26□□□□□ -1.57
GGA3-216ENST00000583282 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
GGA3-216ENST00000583282 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
GGA3-216ENST00000583282 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
GGA3-216ENST00000583282 BRK1Q8WUW1 75 aa5.23□□□□□ -1.57
GGA3-216ENST00000583282 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
GGA3-216ENST00000583282 MT1EP04732 61 aa5.2□□□□□ -1.58
GGA3-216ENST00000583282 ROMO1P60602 79 aa5.19□□□□□ -1.58
GGA3-216ENST00000583282 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
GGA3-216ENST00000583282 SPRR2DP22532 72 aa5.11□□□□□ -1.59
GGA3-216ENST00000583282 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
GGA3-216ENST00000583282 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms