RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
TOP3A-212ENST00000582122 MT1FP04733 61 aa4.95□□□□□ -1.62
TOP3A-212ENST00000582122 TRAV7A0A075B6U4 112 aa4.93□□□□□ -1.62
TOP3A-212ENST00000582122 FAM236AA0A1B0GUQ0 79 aa4.93□□□□□ -1.62
TOP3A-212ENST00000582122 FAM236BA0A1B0GV22 79 aa4.93□□□□□ -1.62
TOP3A-212ENST00000582122 LCA10Q71F78 164 aa4.93□□□□□ -1.62
TOP3A-212ENST00000582122 MACF1Q9UPN3 7388 aaKnown RBP4.91□□□□□ -1.62
TOP3A-212ENST00000582122 NDUFC1O43677 76 aa4.9□□□□□ -1.63
TOP3A-212ENST00000582122 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
TOP3A-212ENST00000582122 KLKP1Q107X0 134 aa4.89□□□□□ -1.63
TOP3A-212ENST00000582122 KRTAP19-1Q8IUB9 90 aa4.89□□□□□ -1.63
TOP3A-212ENST00000582122 KRTAP3-3Q9BYR6 98 aa4.85□□□□□ -1.63
TOP3A-212ENST00000582122 DMAC1Q96GE9 116 aa4.84□□□□□ -1.63
TOP3A-212ENST00000582122 H0YAA0 97 aa4.82□□□□□ -1.64
TOP3A-212ENST00000582122 LCE2BO14633 110 aa4.82□□□□□ -1.64
TOP3A-212ENST00000582122 SERP2Q8N6R1 65 aa4.82□□□□□ -1.64
TOP3A-212ENST00000582122 ACYP2P14621 99 aa4.8□□□□□ -1.64
TOP3A-212ENST00000582122 CRIPTQ9P021 101 aa4.8□□□□□ -1.64
TOP3A-212ENST00000582122 SPTSSBQ8NFR3 76 aa4.77□□□□□ -1.65
TOP3A-212ENST00000582122 SPANXA2-OT1Q8N9U9 137 aa4.76□□□□□ -1.65
TOP3A-212ENST00000582122 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
TOP3A-212ENST00000582122 C20orf197Q8N268 126 aa4.75□□□□□ -1.65
TOP3A-212ENST00000582122 SNURFQ9Y675 71 aa4.75□□□□□ -1.65
TOP3A-212ENST00000582122 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
TOP3A-212ENST00000582122 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
TOP3A-212ENST00000582122 COX7CP15954 63 aa4.71□□□□□ -1.66
TOP3A-212ENST00000582122 NEBP20929 6669 aa4.71□□□□□ -1.66
TOP3A-212ENST00000582122 CHKB-CPT1BH3BT56 60 aa4.7□□□□□ -1.66
TOP3A-212ENST00000582122 ADM2Q7Z4H4 148 aa4.7□□□□□ -1.66
TOP3A-212ENST00000582122 Q5VV11 94 aa4.69□□□□□ -1.66
TOP3A-212ENST00000582122 KRTAP19-8Q3LI54 63 aa4.67□□□□□ -1.66
TOP3A-212ENST00000582122 ANAPC13Q9BS18 74 aa4.63□□□□□ -1.67
TOP3A-212ENST00000582122 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
TOP3A-212ENST00000582122 R4GN34 69 aa4.62□□□□□ -1.67
TOP3A-212ENST00000582122 MT1BP07438 61 aa4.59□□□□□ -1.67
TOP3A-212ENST00000582122 H7BZZ5 65 aa4.57□□□□□ -1.68
TOP3A-212ENST00000582122 P0C880 135 aa4.57□□□□□ -1.68
TOP3A-212ENST00000582122 COA5Q86WW8 74 aa4.56□□□□□ -1.68
TOP3A-212ENST00000582122 KRTAP3-2Q9BYR7 98 aa4.56□□□□□ -1.68
TOP3A-212ENST00000582122 A6NN06 94 aa4.55□□□□□ -1.68
TOP3A-212ENST00000582122 M0QZ58 72 aa4.55□□□□□ -1.68
TOP3A-212ENST00000582122 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
TOP3A-212ENST00000582122 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
TOP3A-212ENST00000582122 SEC61GP60059 68 aa4.52□□□□□ -1.69
TOP3A-212ENST00000582122 ATP5EP56381 51 aaPredicted RBP4.51□□□□□ -1.69
TOP3A-212ENST00000582122 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
TOP3A-212ENST00000582122 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
TOP3A-212ENST00000582122 SERP1Q9Y6X1 66 aa4.49□□□□□ -1.69
TOP3A-212ENST00000582122 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
TOP3A-212ENST00000582122 CCDC179H3BU77 68 aa4.46□□□□□ -1.7
TOP3A-212ENST00000582122 LINC01554Q52M75 96 aa4.46□□□□□ -1.7
TOP3A-212ENST00000582122 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
TOP3A-212ENST00000582122 KMT2DO14686 5537 aa4.41□□□□□ -1.7
TOP3A-212ENST00000582122 TMEM258P61165 79 aa4.41□□□□□ -1.7
TOP3A-212ENST00000582122 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
TOP3A-212ENST00000582122 A0A1B0GU69 56 aa4.37□□□□□ -1.71
TOP3A-212ENST00000582122 A0A1B0GU33 70 aa4.36□□□□□ -1.71
TOP3A-212ENST00000582122 MT1XP80297 61 aa4.35□□□□□ -1.71
TOP3A-212ENST00000582122 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
TOP3A-212ENST00000582122 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
TOP3A-212ENST00000582122 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
TOP3A-212ENST00000582122 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
TOP3A-212ENST00000582122 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
TOP3A-212ENST00000582122 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
TOP3A-212ENST00000582122 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
TOP3A-212ENST00000582122 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
TOP3A-212ENST00000582122 SPATA8Q6RVD6 105 aa4.25□□□□□ -1.73
TOP3A-212ENST00000582122 A0A0D9SG42 100 aa4.24□□□□□ -1.73
TOP3A-212ENST00000582122 V9GYY9 64 aa4.2□□□□□ -1.74
TOP3A-212ENST00000582122 SPRR2EP22531 72 aa4.19□□□□□ -1.74
TOP3A-212ENST00000582122 SPRR2BP35325 72 aa4.19□□□□□ -1.74
TOP3A-212ENST00000582122 SPRR2AP35326 72 aa4.19□□□□□ -1.74
TOP3A-212ENST00000582122 SPINT4Q6UDR6 99 aa4.19□□□□□ -1.74
TOP3A-212ENST00000582122 UQCR11O14957 56 aa4.17□□□□□ -1.74
TOP3A-212ENST00000582122 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
TOP3A-212ENST00000582122 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
TOP3A-212ENST00000582122 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
TOP3A-212ENST00000582122 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
TOP3A-212ENST00000582122 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
TOP3A-212ENST00000582122 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
TOP3A-212ENST00000582122 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
TOP3A-212ENST00000582122 A8MU10 97 aa4.11□□□□□ -1.75
TOP3A-212ENST00000582122 Q1T7F1 81 aa4.11□□□□□ -1.75
TOP3A-212ENST00000582122 PCP4P48539 62 aa4.1□□□□□ -1.75
TOP3A-212ENST00000582122 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
TOP3A-212ENST00000582122 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
TOP3A-212ENST00000582122 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
TOP3A-212ENST00000582122 KRTAP4-8A0A0G2JLE6 195 aa4.06□□□□□ -1.76
TOP3A-212ENST00000582122 KRTAP4-8Q9BYQ9 185 aa4.06□□□□□ -1.76
TOP3A-212ENST00000582122 K7ERS5 55 aa4.05□□□□□ -1.76
TOP3A-212ENST00000582122 SPRR2DP22532 72 aa4.05□□□□□ -1.76
TOP3A-212ENST00000582122 MIR22HGQ0VDD5 57 aa4.05□□□□□ -1.76
TOP3A-212ENST00000582122 PSPHP1O15172 72 aa4.02□□□□□ -1.77
TOP3A-212ENST00000582122 TNP1P09430 55 aa4.01□□□□□ -1.77
TOP3A-212ENST00000582122 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
TOP3A-212ENST00000582122 A6NED7 52 aa3.95□□□□□ -1.78
TOP3A-212ENST00000582122 C10orf95Q9H7T3 257 aa3.94□□□□□ -1.78
TOP3A-212ENST00000582122 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
TOP3A-212ENST00000582122 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
TOP3A-212ENST00000582122 MT1EP04732 61 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms