RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	LINC01558	Q9Y6Z2	57 aa		5.21	□□□□□ -1.58
TRIM16-222	ENST00000581224	LRP2	P98164	4655 aa		5.19	□□□□□ -1.58
TRIM16-222	ENST00000581224	KRTAP9-2	Q9BYQ4	174 aa		5.19	□□□□□ -1.58
TRIM16-222	ENST00000581224	LPA	P08519	4548 aa		5.16	□□□□□ -1.58
TRIM16-222	ENST00000581224	SEC61G	P60059	68 aa		5.16	□□□□□ -1.58
TRIM16-222	ENST00000581224	RBM12B-AS1	Q9P1G2	102 aa		5.16	□□□□□ -1.58
TRIM16-222	ENST00000581224	PSPHP1	O15172	72 aa		5.13	□□□□□ -1.59
TRIM16-222	ENST00000581224		A0A1B0GU69	56 aa		5.12	□□□□□ -1.59
TRIM16-222	ENST00000581224	KRTAP3-1	Q9BYR8	98 aa		5.1	□□□□□ -1.59
TRIM16-222	ENST00000581224	H1FX-AS1	Q4G0G2	97 aa		5.09	□□□□□ -1.59
TRIM16-222	ENST00000581224		Q5VV11	94 aa		5.09	□□□□□ -1.59
TRIM16-222	ENST00000581224	MUC2	Q02817	5179 aa		5.08	□□□□□ -1.6
TRIM16-222	ENST00000581224	FAT4	Q6V0I7	4981 aa		5.08	□□□□□ -1.6
TRIM16-222	ENST00000581224		A6NED7	52 aa		5.06	□□□□□ -1.6
TRIM16-222	ENST00000581224		S4R3F8	94 aa		5.06	□□□□□ -1.6
TRIM16-222	ENST00000581224	BRK1	Q8WUW1	75 aa		5.05	□□□□□ -1.6
TRIM16-222	ENST00000581224	PRO0628	Q9UI54	55 aa		5.04	□□□□□ -1.6
TRIM16-222	ENST00000581224	UQCR11	O14957	56 aa		5.02	□□□□□ -1.61
TRIM16-222	ENST00000581224	LCE2B	O14633	110 aa		5.01	□□□□□ -1.61
TRIM16-222	ENST00000581224	CDC42SE1	Q9NRR8	79 aa		4.99	□□□□□ -1.61
TRIM16-222	ENST00000581224	CSAG1	Q6PB30	78 aa		4.98	□□□□□ -1.61
TRIM16-222	ENST00000581224	LCA10	Q71F78	164 aa		4.98	□□□□□ -1.61
TRIM16-222	ENST00000581224		A0A1B0GU33	70 aa		4.93	□□□□□ -1.62
TRIM16-222	ENST00000581224	MIR22HG	Q0VDD5	57 aa		4.93	□□□□□ -1.62
TRIM16-222	ENST00000581224	SPATA8	Q6RVD6	105 aa		4.93	□□□□□ -1.62
TRIM16-222	ENST00000581224	MUC17	Q685J3	4493 aa		4.91	□□□□□ -1.62
TRIM16-222	ENST00000581224		H0YAA0	97 aa		4.9	□□□□□ -1.63
TRIM16-222	ENST00000581224	SVIP	Q8NHG7	77 aa		4.84	□□□□□ -1.63
TRIM16-222	ENST00000581224	KRTAP4-1	Q9BYQ7	146 aa		4.84	□□□□□ -1.63
TRIM16-222	ENST00000581224	LCE2C	Q5TA81	110 aa		4.83	□□□□□ -1.64
TRIM16-222	ENST00000581224	FSIP2	Q5CZC0	6907 aa		4.82	□□□□□ -1.64
TRIM16-222	ENST00000581224		K7ERS5	55 aa		4.82	□□□□□ -1.64
TRIM16-222	ENST00000581224	PMAIP1	Q13794	54 aa		4.82	□□□□□ -1.64
TRIM16-222	ENST00000581224	ADM2	Q7Z4H4	148 aa		4.81	□□□□□ -1.64
TRIM16-222	ENST00000581224		M0QZ58	72 aa		4.8	□□□□□ -1.64
TRIM16-222	ENST00000581224	KRTAP10-6	P60371	365 aa	Predicted RBP	4.8	□□□□□ -1.64
TRIM16-222	ENST00000581224	CRCT1	Q9UGL9	99 aa		4.77	□□□□□ -1.65
TRIM16-222	ENST00000581224	KRTAP19-2	Q3LHN2	52 aa		4.76	□□□□□ -1.65
TRIM16-222	ENST00000581224		A8MU10	97 aa		4.74	□□□□□ -1.65
TRIM16-222	ENST00000581224		P0C880	135 aa		4.73	□□□□□ -1.65
TRIM16-222	ENST00000581224	LCE2A	Q5TA79	106 aa	Predicted RBP	4.73	□□□□□ -1.65
TRIM16-222	ENST00000581224		A6NN06	94 aa		4.7	□□□□□ -1.66
TRIM16-222	ENST00000581224	CRIPT	Q9P021	101 aa		4.7	□□□□□ -1.66
TRIM16-222	ENST00000581224		R4GN34	69 aa		4.69	□□□□□ -1.66
TRIM16-222	ENST00000581224		M0R2T5	61 aa		4.65	□□□□□ -1.67
TRIM16-222	ENST00000581224	KTN1-AS1	Q86SY8	53 aa		4.65	□□□□□ -1.67
TRIM16-222	ENST00000581224	FLG	P20930	4061 aa	Predicted RBP	4.65	□□□□□ -1.67
TRIM16-222	ENST00000581224	LOR	P23490	312 aa	Predicted RBP	4.64	□□□□□ -1.67
TRIM16-222	ENST00000581224	MT1H	P80294	61 aa		4.64	□□□□□ -1.67
TRIM16-222	ENST00000581224	KRTAP9-7	A8MTY7	169 aa		4.62	□□□□□ -1.67
TRIM16-222	ENST00000581224	KRTAP13-4	Q3LI77	160 aa		4.62	□□□□□ -1.67
TRIM16-222	ENST00000581224		A0A0D9SG42	100 aa		4.61	□□□□□ -1.67
TRIM16-222	ENST00000581224	SPINT4	Q6UDR6	99 aa		4.55	□□□□□ -1.68
TRIM16-222	ENST00000581224	KRTAP12-1	P59990	96 aa		4.54	□□□□□ -1.68
TRIM16-222	ENST00000581224		H3BS24	57 aa		4.53	□□□□□ -1.68
TRIM16-222	ENST00000581224	ROMO1	P60602	79 aa		4.53	□□□□□ -1.68
TRIM16-222	ENST00000581224	LINC01554	Q52M75	96 aa		4.53	□□□□□ -1.68
TRIM16-222	ENST00000581224	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.5	□□□□□ -1.69
TRIM16-222	ENST00000581224	KRTAP12-2	P59991	146 aa		4.49	□□□□□ -1.69
TRIM16-222	ENST00000581224	KRTAP10-10	P60014	251 aa		4.44	□□□□□ -1.7
TRIM16-222	ENST00000581224	SPRR2G	Q9BYE4	73 aa		4.44	□□□□□ -1.7
TRIM16-222	ENST00000581224	CAMK2N1	Q7Z7J9	78 aa		4.42	□□□□□ -1.7
TRIM16-222	ENST00000581224	PLAC4	Q8WY50	150 aa		4.41	□□□□□ -1.7
TRIM16-222	ENST00000581224	MT2A	P02795	61 aa		4.4	□□□□□ -1.71
TRIM16-222	ENST00000581224	KRTAP9-8	Q9BYQ0	159 aa		4.4	□□□□□ -1.71
TRIM16-222	ENST00000581224	KRTAP25-1	Q3LHN0	102 aa		4.35	□□□□□ -1.71
TRIM16-222	ENST00000581224	PRAC1	Q96KF2	57 aa		4.35	□□□□□ -1.71
TRIM16-222	ENST00000581224	MT1F	P04733	61 aa		4.34	□□□□□ -1.71
TRIM16-222	ENST00000581224	KRTAP19-1	Q8IUB9	90 aa		4.33	□□□□□ -1.72
TRIM16-222	ENST00000581224	KRTAP19-8	Q3LI54	63 aa		4.3	□□□□□ -1.72
TRIM16-222	ENST00000581224	SSPO	A2VEC9	5147 aa		4.28	□□□□□ -1.72
TRIM16-222	ENST00000581224	C10orf95	Q9H7T3	257 aa		4.26	□□□□□ -1.73
TRIM16-222	ENST00000581224	TNP1	P09430	55 aa		4.25	□□□□□ -1.73
TRIM16-222	ENST00000581224	PP632	Q6XCG6	107 aa		4.25	□□□□□ -1.73
TRIM16-222	ENST00000581224	KRTAP9-3	Q9BYQ3	159 aa		4.24	□□□□□ -1.73
TRIM16-222	ENST00000581224	SYNE2	Q8WXH0	6885 aa	Known RBP	4.24	□□□□□ -1.73
TRIM16-222	ENST00000581224	USH2A	O75445	5202 aa		4.23	□□□□□ -1.73
TRIM16-222	ENST00000581224	MACF1	Q9UPN3	7388 aa	Known RBP	4.23	□□□□□ -1.73
TRIM16-222	ENST00000581224	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.22	□□□□□ -1.73
TRIM16-222	ENST00000581224	KRTAP23-1	A1A580	65 aa		4.22	□□□□□ -1.73
TRIM16-222	ENST00000581224	PRO2289	Q9P1D8	64 aa		4.2	□□□□□ -1.74
TRIM16-222	ENST00000581224	MT1B	P07438	61 aa		4.15	□□□□□ -1.75
TRIM16-222	ENST00000581224	KRTAP10-5	P60370	271 aa		4.05	□□□□□ -1.76
TRIM16-222	ENST00000581224	MT1X	P80297	61 aa		4.05	□□□□□ -1.76
TRIM16-222	ENST00000581224	NEB	P20929	6669 aa		4.05	□□□□□ -1.76
TRIM16-222	ENST00000581224	KRTAP19-6	Q3LI70	58 aa		4.03	□□□□□ -1.76
TRIM16-222	ENST00000581224	KRTAP20-1	Q3LI63	56 aa		3.97	□□□□□ -1.77
TRIM16-222	ENST00000581224	KRTAP10-12	P60413	245 aa		3.95	□□□□□ -1.78
TRIM16-222	ENST00000581224	KRTAP6-3	Q3LI67	103 aa		3.94	□□□□□ -1.78
TRIM16-222	ENST00000581224	MUC12	Q9UKN1	5478 aa		3.94	□□□□□ -1.78
TRIM16-222	ENST00000581224	LCE3A	Q5TA76	89 aa		3.91	□□□□□ -1.78
TRIM16-222	ENST00000581224	KRTAP8-1	Q8IUC2	63 aa		3.91	□□□□□ -1.78
TRIM16-222	ENST00000581224	KRTAP10-7	P60409	375 aa	Predicted RBP	3.85	□□□□□ -1.79
TRIM16-222	ENST00000581224	KRTAP12-3	P60328	96 aa		3.82	□□□□□ -1.8
TRIM16-222	ENST00000581224	KRTAP15-1	Q3LI76	137 aa		3.82	□□□□□ -1.8
TRIM16-222	ENST00000581224	GPR98	Q8WXG9	6306 aa		3.8	□□□□□ -1.8
TRIM16-222	ENST00000581224	KMT2D	O14686	5537 aa		3.8	□□□□□ -1.8
TRIM16-222	ENST00000581224	KRTAP19-4	Q3LI73	84 aa		3.79	□□□□□ -1.8
TRIM16-222	ENST00000581224	LUZP6	Q538Z0	58 aa		3.76	□□□□□ -1.81
TRIM16-222	ENST00000581224	MDN1	Q9NU22	5596 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 1165.8 ms