RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
NDEL1-207ENST00000580012 CSAG1Q6PB30 78 aa10.73□□□□□ -0.69
NDEL1-207ENST00000580012 KRTAP10-10P60014 251 aa10.72□□□□□ -0.69
NDEL1-207ENST00000580012 KRTAP9-3Q9BYQ3 159 aa10.67□□□□□ -0.7
NDEL1-207ENST00000580012 DMAC1Q96GE9 116 aa10.66□□□□□ -0.7
NDEL1-207ENST00000580012 SNURFQ9Y675 71 aa10.65□□□□□ -0.7
NDEL1-207ENST00000580012 C20orf197Q8N268 126 aa10.62□□□□□ -0.71
NDEL1-207ENST00000580012 NDUFC1O43677 76 aa10.58□□□□□ -0.72
NDEL1-207ENST00000580012 USH2AO75445 5202 aa10.58□□□□□ -0.72
NDEL1-207ENST00000580012 COX7CP15954 63 aa10.57□□□□□ -0.72
NDEL1-207ENST00000580012 SSPOA2VEC9 5147 aa10.54□□□□□ -0.72
NDEL1-207ENST00000580012 LCE2BO14633 110 aa10.49□□□□□ -0.73
NDEL1-207ENST00000580012 SPANXA2-OT1Q8N9U9 137 aa10.49□□□□□ -0.73
NDEL1-207ENST00000580012 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.48□□□□□ -0.73
NDEL1-207ENST00000580012 ACYP2P14621 99 aa10.47□□□□□ -0.73
NDEL1-207ENST00000580012 KRTAP9-7A8MTY7 169 aa10.45□□□□□ -0.74
NDEL1-207ENST00000580012 H0YAA0 97 aa10.43□□□□□ -0.74
NDEL1-207ENST00000580012 ANAPC13Q9BS18 74 aa10.4□□□□□ -0.74
NDEL1-207ENST00000580012 CYSTM1Q9H1C7 97 aa10.34□□□□□ -0.75
NDEL1-207ENST00000580012 KRTAP19-1Q8IUB9 90 aa10.33□□□□□ -0.76
NDEL1-207ENST00000580012 FCGBPQ9Y6R7 5405 aaPredicted RBP10.32□□□□□ -0.76
NDEL1-207ENST00000580012 H7BZZ5 65 aa10.32□□□□□ -0.76
NDEL1-207ENST00000580012 ADM2Q7Z4H4 148 aa10.27□□□□□ -0.77
NDEL1-207ENST00000580012 SPRR2GQ9BYE4 73 aa10.27□□□□□ -0.77
NDEL1-207ENST00000580012 CRIPTQ9P021 101 aa10.26□□□□□ -0.77
NDEL1-207ENST00000580012 CHKB-CPT1BH3BT56 60 aa10.22□□□□□ -0.77
NDEL1-207ENST00000580012 CCDC179H3BU77 68 aa10.22□□□□□ -0.77
NDEL1-207ENST00000580012 SPTSSBQ8NFR3 76 aa10.22□□□□□ -0.77
NDEL1-207ENST00000580012 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
NDEL1-207ENST00000580012 KRTAP19-8Q3LI54 63 aa10.15□□□□□ -0.78
NDEL1-207ENST00000580012 SYNE2Q8WXH0 6885 aaKnown RBP10.14□□□□□ -0.79
NDEL1-207ENST00000580012 MACF1Q9UPN3 7388 aaKnown RBP10.13□□□□□ -0.79
NDEL1-207ENST00000580012 P0C880 135 aa10.13□□□□□ -0.79
NDEL1-207ENST00000580012 COA5Q86WW8 74 aa10.13□□□□□ -0.79
NDEL1-207ENST00000580012 MT1BP07438 61 aa10.06□□□□□ -0.8
NDEL1-207ENST00000580012 KRTAP19-6Q3LI70 58 aa10.05□□□□□ -0.8
NDEL1-207ENST00000580012 Q5VV11 94 aa10.02□□□□□ -0.81
NDEL1-207ENST00000580012 R4GN34 69 aa9.94□□□□□ -0.82
NDEL1-207ENST00000580012 ATP5EP56381 51 aaPredicted RBP9.92□□□□□ -0.82
NDEL1-207ENST00000580012 M0QZ58 72 aa9.89□□□□□ -0.83
NDEL1-207ENST00000580012 TMEM258P61165 79 aa9.85□□□□□ -0.83
NDEL1-207ENST00000580012 SEC61GP60059 68 aa9.73□□□□□ -0.85
NDEL1-207ENST00000580012 KRTAP10-5P60370 271 aa9.72□□□□□ -0.85
NDEL1-207ENST00000580012 SERP1Q9Y6X1 66 aa9.72□□□□□ -0.85
NDEL1-207ENST00000580012 A6NN06 94 aa9.69□□□□□ -0.86
NDEL1-207ENST00000580012 KRTAP6-3Q3LI67 103 aa9.68□□□□□ -0.86
NDEL1-207ENST00000580012 LINC01554Q52M75 96 aa9.68□□□□□ -0.86
NDEL1-207ENST00000580012 PLAC4Q8WY50 150 aa9.68□□□□□ -0.86
NDEL1-207ENST00000580012 KRTAP13-4Q3LI77 160 aa9.67□□□□□ -0.86
NDEL1-207ENST00000580012 A0A1B0GU69 56 aa9.58□□□□□ -0.88
NDEL1-207ENST00000580012 A0A1B0GU33 70 aa9.57□□□□□ -0.88
NDEL1-207ENST00000580012 MT1XP80297 61 aa9.55□□□□□ -0.88
NDEL1-207ENST00000580012 NEBP20929 6669 aa9.54□□□□□ -0.88
NDEL1-207ENST00000580012 PCP4P48539 62 aa9.52□□□□□ -0.89
NDEL1-207ENST00000580012 LINC01558Q9Y6Z2 57 aa9.52□□□□□ -0.89
NDEL1-207ENST00000580012 PRO2289Q9P1D8 64 aa9.48□□□□□ -0.89
NDEL1-207ENST00000580012 SPATA8Q6RVD6 105 aa9.46□□□□□ -0.9
NDEL1-207ENST00000580012 PRR15LQ9BU68 103 aa9.42□□□□□ -0.9
NDEL1-207ENST00000580012 MUC12Q9UKN1 5478 aa9.37□□□□□ -0.91
NDEL1-207ENST00000580012 A0A0D9SG42 100 aa9.34□□□□□ -0.91
NDEL1-207ENST00000580012 SMIM26A0A096LP01 95 aa9.28□□□□□ -0.92
NDEL1-207ENST00000580012 KRTAP12-1P59990 96 aa9.25□□□□□ -0.93
NDEL1-207ENST00000580012 KRTAP12-2P59991 146 aa9.23□□□□□ -0.93
NDEL1-207ENST00000580012 Q1T7F1 81 aa9.23□□□□□ -0.93
NDEL1-207ENST00000580012 RPS28P62857 69 aaKnown RBP9.22□□□□□ -0.93
NDEL1-207ENST00000580012 V9GYY9 64 aa9.22□□□□□ -0.93
NDEL1-207ENST00000580012 A8MU10 97 aa9.21□□□□□ -0.94
NDEL1-207ENST00000580012 CAMK2N1Q7Z7J9 78 aa9.2□□□□□ -0.94
NDEL1-207ENST00000580012 SPINT4Q6UDR6 99 aa9.18□□□□□ -0.94
NDEL1-207ENST00000580012 UQCR11O14957 56 aa9.15□□□□□ -0.94
NDEL1-207ENST00000580012 KRTAP20-1Q3LI63 56 aa9.13□□□□□ -0.95
NDEL1-207ENST00000580012 KRTAP5-9P26371 169 aa9.1□□□□□ -0.95
NDEL1-207ENST00000580012 KRTAP10-7P60409 375 aaPredicted RBP9.1□□□□□ -0.95
NDEL1-207ENST00000580012 KRTAP10-12P60413 245 aa9.09□□□□□ -0.95
NDEL1-207ENST00000580012 MDN1Q9NU22 5596 aa9.08□□□□□ -0.96
NDEL1-207ENST00000580012 KMT2DO14686 5537 aa9.08□□□□□ -0.96
NDEL1-207ENST00000580012 PSPHP1O15172 72 aa9.07□□□□□ -0.96
NDEL1-207ENST00000580012 MIR22HGQ0VDD5 57 aa8.98□□□□□ -0.97
NDEL1-207ENST00000580012 KRTAP4-8A0A0G2JLE6 195 aa8.97□□□□□ -0.97
NDEL1-207ENST00000580012 KRTAP4-8Q9BYQ9 185 aa8.97□□□□□ -0.97
NDEL1-207ENST00000580012 KRTAP8-1Q8IUC2 63 aa8.91□□□□□ -0.98
NDEL1-207ENST00000580012 C10orf95Q9H7T3 257 aa8.82□□□□□ -1
NDEL1-207ENST00000580012 KRTAP2-3P0C7H8 128 aa8.8□□□□□ -1
NDEL1-207ENST00000580012 KRTAP2-4Q9BYR9 128 aa8.8□□□□□ -1
NDEL1-207ENST00000580012 SPRR2FQ96RM1 72 aa8.78□□□□□ -1
NDEL1-207ENST00000580012 A6NED7 52 aa8.77□□□□□ -1.01
NDEL1-207ENST00000580012 SPRR2EP22531 72 aa8.72□□□□□ -1.01
NDEL1-207ENST00000580012 SPRR2BP35325 72 aa8.72□□□□□ -1.01
NDEL1-207ENST00000580012 SPRR2AP35326 72 aa8.72□□□□□ -1.01
NDEL1-207ENST00000580012 K7ERS5 55 aa8.67□□□□□ -1.02
NDEL1-207ENST00000580012 TNP1P09430 55 aa8.64□□□□□ -1.03
NDEL1-207ENST00000580012 LCE1AQ5T7P2 110 aa8.56□□□□□ -1.04
NDEL1-207ENST00000580012 KRTAP19-7Q3SYF9 63 aa8.54□□□□□ -1.04
NDEL1-207ENST00000580012 CDC42SE1Q9NRR8 79 aa8.53□□□□□ -1.04
NDEL1-207ENST00000580012 KRTAP2-2Q9BYT5 123 aa8.5□□□□□ -1.05
NDEL1-207ENST00000580012 KRTAP2-1Q9BYU5 128 aa8.5□□□□□ -1.05
NDEL1-207ENST00000580012 LCE3AQ5TA76 89 aa8.45□□□□□ -1.06
NDEL1-207ENST00000580012 MT1EP04732 61 aa8.43□□□□□ -1.06
NDEL1-207ENST00000580012 SPRR2DP22532 72 aa8.43□□□□□ -1.06
NDEL1-207ENST00000580012 KRTAP25-1Q3LHN0 102 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms