RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 Q5W150 140 aa4.33□□□□□ -1.72
CDK5RAP3-211ENST00000578996 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
CDK5RAP3-211ENST00000578996 OCR1Q9BZK8 76 aa4.32□□□□□ -1.72
CDK5RAP3-211ENST00000578996 C4orf26Q17RF5 130 aa4.31□□□□□ -1.72
CDK5RAP3-211ENST00000578996 CCDC179H3BU77 68 aa4.28□□□□□ -1.72
CDK5RAP3-211ENST00000578996 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
CDK5RAP3-211ENST00000578996 C5orf47Q569G3 176 aa4.27□□□□□ -1.73
CDK5RAP3-211ENST00000578996 TP53AIP1Q9HCN2 124 aa4.27□□□□□ -1.73
CDK5RAP3-211ENST00000578996 H3BPC8 53 aa4.25□□□□□ -1.73
CDK5RAP3-211ENST00000578996 NDUFC1O43677 76 aa4.24□□□□□ -1.73
CDK5RAP3-211ENST00000578996 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
CDK5RAP3-211ENST00000578996 S4R3F8 94 aa4.23□□□□□ -1.73
CDK5RAP3-211ENST00000578996 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
CDK5RAP3-211ENST00000578996 MP68P56378 58 aa4.2□□□□□ -1.74
CDK5RAP3-211ENST00000578996 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
CDK5RAP3-211ENST00000578996 C1orf64Q8NEQ6 169 aa4.2□□□□□ -1.74
CDK5RAP3-211ENST00000578996 TRAV22A0A0B4J277 110 aa4.19□□□□□ -1.74
CDK5RAP3-211ENST00000578996 TMEM258P61165 79 aa4.19□□□□□ -1.74
CDK5RAP3-211ENST00000578996 LCA10Q71F78 164 aa4.19□□□□□ -1.74
CDK5RAP3-211ENST00000578996 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
CDK5RAP3-211ENST00000578996 A6NN06 94 aa4.18□□□□□ -1.74
CDK5RAP3-211ENST00000578996 H7BZZ5 65 aa4.18□□□□□ -1.74
CDK5RAP3-211ENST00000578996 CSAG1Q6PB30 78 aa4.18□□□□□ -1.74
CDK5RAP3-211ENST00000578996 H0Y9P7 68 aa4.17□□□□□ -1.74
CDK5RAP3-211ENST00000578996 Q5VV11 94 aa4.17□□□□□ -1.74
CDK5RAP3-211ENST00000578996 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
CDK5RAP3-211ENST00000578996 ATP5EP56381 51 aaPredicted RBP4.16□□□□□ -1.74
CDK5RAP3-211ENST00000578996 SNURFQ9Y675 71 aa4.16□□□□□ -1.74
CDK5RAP3-211ENST00000578996 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
CDK5RAP3-211ENST00000578996 MT1BP07438 61 aa4.14□□□□□ -1.75
CDK5RAP3-211ENST00000578996 LINC00208Q96KT6 92 aa4.14□□□□□ -1.75
CDK5RAP3-211ENST00000578996 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
CDK5RAP3-211ENST00000578996 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
CDK5RAP3-211ENST00000578996 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
CDK5RAP3-211ENST00000578996 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
CDK5RAP3-211ENST00000578996 CYP4F30PQ9H0H9 118 aa4.09□□□□□ -1.75
CDK5RAP3-211ENST00000578996 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
CDK5RAP3-211ENST00000578996 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
CDK5RAP3-211ENST00000578996 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
CDK5RAP3-211ENST00000578996 SERP1Q9Y6X1 66 aa4.06□□□□□ -1.76
CDK5RAP3-211ENST00000578996 NEBP20929 6669 aa4.06□□□□□ -1.76
CDK5RAP3-211ENST00000578996 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
CDK5RAP3-211ENST00000578996 DMAC1Q96GE9 116 aa3.98□□□□□ -1.77
CDK5RAP3-211ENST00000578996 A8MUN3 132 aa3.97□□□□□ -1.77
CDK5RAP3-211ENST00000578996 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
CDK5RAP3-211ENST00000578996 ADM2Q7Z4H4 148 aa3.97□□□□□ -1.77
CDK5RAP3-211ENST00000578996 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
CDK5RAP3-211ENST00000578996 ACYP2P14621 99 aa3.96□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
CDK5RAP3-211ENST00000578996 H0YAA0 97 aa3.95□□□□□ -1.78
CDK5RAP3-211ENST00000578996 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KMT2DO14686 5537 aa3.94□□□□□ -1.78
CDK5RAP3-211ENST00000578996 COA5Q86WW8 74 aa3.93□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
CDK5RAP3-211ENST00000578996 PRO2289Q9P1D8 64 aa3.91□□□□□ -1.78
CDK5RAP3-211ENST00000578996 PLAC4Q8WY50 150 aa3.9□□□□□ -1.79
CDK5RAP3-211ENST00000578996 Q1T7F1 81 aa3.89□□□□□ -1.79
CDK5RAP3-211ENST00000578996 V9GYY9 64 aa3.89□□□□□ -1.79
CDK5RAP3-211ENST00000578996 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
CDK5RAP3-211ENST00000578996 R4GN34 69 aa3.88□□□□□ -1.79
CDK5RAP3-211ENST00000578996 MT1XP80297 61 aa3.86□□□□□ -1.79
CDK5RAP3-211ENST00000578996 CHKB-CPT1BH3BT56 60 aa3.85□□□□□ -1.79
CDK5RAP3-211ENST00000578996 SPRR2EP22531 72 aa3.85□□□□□ -1.79
CDK5RAP3-211ENST00000578996 SPRR2BP35325 72 aa3.85□□□□□ -1.79
CDK5RAP3-211ENST00000578996 SPRR2AP35326 72 aa3.85□□□□□ -1.79
CDK5RAP3-211ENST00000578996 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
CDK5RAP3-211ENST00000578996 M0QZ58 72 aa3.84□□□□□ -1.79
CDK5RAP3-211ENST00000578996 P0C880 135 aa3.84□□□□□ -1.79
CDK5RAP3-211ENST00000578996 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
CDK5RAP3-211ENST00000578996 SPTSSBQ8NFR3 76 aa3.84□□□□□ -1.79
CDK5RAP3-211ENST00000578996 LINC01554Q52M75 96 aa3.83□□□□□ -1.8
CDK5RAP3-211ENST00000578996 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
CDK5RAP3-211ENST00000578996 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
CDK5RAP3-211ENST00000578996 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
CDK5RAP3-211ENST00000578996 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
CDK5RAP3-211ENST00000578996 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
CDK5RAP3-211ENST00000578996 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
CDK5RAP3-211ENST00000578996 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
CDK5RAP3-211ENST00000578996 A0A1B0GU69 56 aa3.72□□□□□ -1.81
CDK5RAP3-211ENST00000578996 PSPHP1O15172 72 aa3.72□□□□□ -1.81
CDK5RAP3-211ENST00000578996 SPRR2DP22532 72 aa3.72□□□□□ -1.81
CDK5RAP3-211ENST00000578996 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
CDK5RAP3-211ENST00000578996 SEC61GP60059 68 aa3.7□□□□□ -1.82
CDK5RAP3-211ENST00000578996 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
CDK5RAP3-211ENST00000578996 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
CDK5RAP3-211ENST00000578996 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
CDK5RAP3-211ENST00000578996 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
CDK5RAP3-211ENST00000578996 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
CDK5RAP3-211ENST00000578996 KRTAP10-12P60413 245 aa3.65□□□□□ -1.83
CDK5RAP3-211ENST00000578996 UQCR11O14957 56 aa3.64□□□□□ -1.83
CDK5RAP3-211ENST00000578996 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
CDK5RAP3-211ENST00000578996 A6NED7 52 aa3.63□□□□□ -1.83
CDK5RAP3-211ENST00000578996 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
CDK5RAP3-211ENST00000578996 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
CDK5RAP3-211ENST00000578996 A0A1B0GU33 70 aa3.6□□□□□ -1.83
CDK5RAP3-211ENST00000578996 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
CDK5RAP3-211ENST00000578996 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms