RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 Q5W150 140 aa4.33□□□□□ -1.72
CDK5RAP3-211ENST00000578996 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
CDK5RAP3-211ENST00000578996 OCR1Q9BZK8 76 aa4.32□□□□□ -1.72
CDK5RAP3-211ENST00000578996 C4orf26Q17RF5 130 aa4.31□□□□□ -1.72
CDK5RAP3-211ENST00000578996 CCDC179H3BU77 68 aa4.28□□□□□ -1.72
CDK5RAP3-211ENST00000578996 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
CDK5RAP3-211ENST00000578996 C5orf47Q569G3 176 aa4.27□□□□□ -1.73
CDK5RAP3-211ENST00000578996 TP53AIP1Q9HCN2 124 aa4.27□□□□□ -1.73
CDK5RAP3-211ENST00000578996 H3BPC8 53 aa4.25□□□□□ -1.73
CDK5RAP3-211ENST00000578996 NDUFC1O43677 76 aa4.24□□□□□ -1.73
CDK5RAP3-211ENST00000578996 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
CDK5RAP3-211ENST00000578996 S4R3F8 94 aa4.23□□□□□ -1.73
CDK5RAP3-211ENST00000578996 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
CDK5RAP3-211ENST00000578996 MP68P56378 58 aa4.2□□□□□ -1.74
CDK5RAP3-211ENST00000578996 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
CDK5RAP3-211ENST00000578996 C1orf64Q8NEQ6 169 aa4.2□□□□□ -1.74
CDK5RAP3-211ENST00000578996 TRAV22A0A0B4J277 110 aa4.19□□□□□ -1.74
CDK5RAP3-211ENST00000578996 TMEM258P61165 79 aa4.19□□□□□ -1.74
CDK5RAP3-211ENST00000578996 LCA10Q71F78 164 aa4.19□□□□□ -1.74
CDK5RAP3-211ENST00000578996 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
CDK5RAP3-211ENST00000578996 A6NN06 94 aa4.18□□□□□ -1.74
CDK5RAP3-211ENST00000578996 H7BZZ5 65 aa4.18□□□□□ -1.74
CDK5RAP3-211ENST00000578996 CSAG1Q6PB30 78 aa4.18□□□□□ -1.74
CDK5RAP3-211ENST00000578996 H0Y9P7 68 aa4.17□□□□□ -1.74
CDK5RAP3-211ENST00000578996 Q5VV11 94 aa4.17□□□□□ -1.74
CDK5RAP3-211ENST00000578996 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
CDK5RAP3-211ENST00000578996 ATP5EP56381 51 aaPredicted RBP4.16□□□□□ -1.74
CDK5RAP3-211ENST00000578996 SNURFQ9Y675 71 aa4.16□□□□□ -1.74
CDK5RAP3-211ENST00000578996 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
CDK5RAP3-211ENST00000578996 MT1BP07438 61 aa4.14□□□□□ -1.75
CDK5RAP3-211ENST00000578996 LINC00208Q96KT6 92 aa4.14□□□□□ -1.75
CDK5RAP3-211ENST00000578996 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
CDK5RAP3-211ENST00000578996 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
CDK5RAP3-211ENST00000578996 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
CDK5RAP3-211ENST00000578996 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
CDK5RAP3-211ENST00000578996 CYP4F30PQ9H0H9 118 aa4.09□□□□□ -1.75
CDK5RAP3-211ENST00000578996 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
CDK5RAP3-211ENST00000578996 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
CDK5RAP3-211ENST00000578996 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
CDK5RAP3-211ENST00000578996 SERP1Q9Y6X1 66 aa4.06□□□□□ -1.76
CDK5RAP3-211ENST00000578996 NEBP20929 6669 aa4.06□□□□□ -1.76
CDK5RAP3-211ENST00000578996 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
CDK5RAP3-211ENST00000578996 DMAC1Q96GE9 116 aa3.98□□□□□ -1.77
CDK5RAP3-211ENST00000578996 A8MUN3 132 aa3.97□□□□□ -1.77
CDK5RAP3-211ENST00000578996 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
CDK5RAP3-211ENST00000578996 ADM2Q7Z4H4 148 aa3.97□□□□□ -1.77
CDK5RAP3-211ENST00000578996 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
CDK5RAP3-211ENST00000578996 ACYP2P14621 99 aa3.96□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
CDK5RAP3-211ENST00000578996 H0YAA0 97 aa3.95□□□□□ -1.78
CDK5RAP3-211ENST00000578996 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KMT2DO14686 5537 aa3.94□□□□□ -1.78
CDK5RAP3-211ENST00000578996 COA5Q86WW8 74 aa3.93□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
CDK5RAP3-211ENST00000578996 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
CDK5RAP3-211ENST00000578996 PRO2289Q9P1D8 64 aa3.91□□□□□ -1.78
CDK5RAP3-211ENST00000578996 PLAC4Q8WY50 150 aa3.9□□□□□ -1.79
CDK5RAP3-211ENST00000578996 Q1T7F1 81 aa3.89□□□□□ -1.79
CDK5RAP3-211ENST00000578996 V9GYY9 64 aa3.89□□□□□ -1.79
CDK5RAP3-211ENST00000578996 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
CDK5RAP3-211ENST00000578996 R4GN34 69 aa3.88□□□□□ -1.79
CDK5RAP3-211ENST00000578996 MT1XP80297 61 aa3.86□□□□□ -1.79
CDK5RAP3-211ENST00000578996 CHKB-CPT1BH3BT56 60 aa3.85□□□□□ -1.79
CDK5RAP3-211ENST00000578996 SPRR2EP22531 72 aa3.85□□□□□ -1.79
CDK5RAP3-211ENST00000578996 SPRR2BP35325 72 aa3.85□□□□□ -1.79
CDK5RAP3-211ENST00000578996 SPRR2AP35326 72 aa3.85□□□□□ -1.79
CDK5RAP3-211ENST00000578996 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
CDK5RAP3-211ENST00000578996 M0QZ58 72 aa3.84□□□□□ -1.79
CDK5RAP3-211ENST00000578996 P0C880 135 aa3.84□□□□□ -1.79
CDK5RAP3-211ENST00000578996 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
CDK5RAP3-211ENST00000578996 SPTSSBQ8NFR3 76 aa3.84□□□□□ -1.79
CDK5RAP3-211ENST00000578996 LINC01554Q52M75 96 aa3.83□□□□□ -1.8
CDK5RAP3-211ENST00000578996 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
CDK5RAP3-211ENST00000578996 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
CDK5RAP3-211ENST00000578996 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
CDK5RAP3-211ENST00000578996 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
CDK5RAP3-211ENST00000578996 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
CDK5RAP3-211ENST00000578996 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
CDK5RAP3-211ENST00000578996 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
CDK5RAP3-211ENST00000578996 A0A1B0GU69 56 aa3.72□□□□□ -1.81
CDK5RAP3-211ENST00000578996 PSPHP1O15172 72 aa3.72□□□□□ -1.81
CDK5RAP3-211ENST00000578996 SPRR2DP22532 72 aa3.72□□□□□ -1.81
CDK5RAP3-211ENST00000578996 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
CDK5RAP3-211ENST00000578996 SEC61GP60059 68 aa3.7□□□□□ -1.82
CDK5RAP3-211ENST00000578996 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
CDK5RAP3-211ENST00000578996 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
CDK5RAP3-211ENST00000578996 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
CDK5RAP3-211ENST00000578996 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
CDK5RAP3-211ENST00000578996 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
CDK5RAP3-211ENST00000578996 KRTAP10-12P60413 245 aa3.65□□□□□ -1.83
CDK5RAP3-211ENST00000578996 UQCR11O14957 56 aa3.64□□□□□ -1.83
CDK5RAP3-211ENST00000578996 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
CDK5RAP3-211ENST00000578996 A6NED7 52 aa3.63□□□□□ -1.83
CDK5RAP3-211ENST00000578996 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
CDK5RAP3-211ENST00000578996 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
CDK5RAP3-211ENST00000578996 A0A1B0GU33 70 aa3.6□□□□□ -1.83
CDK5RAP3-211ENST00000578996 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
CDK5RAP3-211ENST00000578996 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms