RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 C5orf47Q569G3 176 aa7.23□□□□□ -1.25
SLC6A4-204ENST00000578609 FSIP2Q5CZC0 6907 aa7.23□□□□□ -1.25
SLC6A4-204ENST00000578609 SCGB1A1P11684 91 aa7.22□□□□□ -1.25
SLC6A4-204ENST00000578609 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
SLC6A4-204ENST00000578609 LCA10Q71F78 164 aa7.2□□□□□ -1.26
SLC6A4-204ENST00000578609 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
SLC6A4-204ENST00000578609 H3BPC8 53 aa7.19□□□□□ -1.26
SLC6A4-204ENST00000578609 KLKP1Q107X0 134 aa7.18□□□□□ -1.26
SLC6A4-204ENST00000578609 FAM236AA0A1B0GUQ0 79 aa7.15□□□□□ -1.26
SLC6A4-204ENST00000578609 FAM236BA0A1B0GV22 79 aa7.15□□□□□ -1.26
SLC6A4-204ENST00000578609 CSAG1Q6PB30 78 aa7.14□□□□□ -1.27
SLC6A4-204ENST00000578609 USH2AO75445 5202 aa7.14□□□□□ -1.27
SLC6A4-204ENST00000578609 A8MUN3 132 aa7.13□□□□□ -1.27
SLC6A4-204ENST00000578609 SMIM20Q8N5G0 67 aa7.12□□□□□ -1.27
SLC6A4-204ENST00000578609 TRAV7A0A075B6U4 112 aa7.1□□□□□ -1.27
SLC6A4-204ENST00000578609 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
SLC6A4-204ENST00000578609 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
SLC6A4-204ENST00000578609 SSPOA2VEC9 5147 aa7.02□□□□□ -1.29
SLC6A4-204ENST00000578609 DMAC1Q96GE9 116 aa7.02□□□□□ -1.29
SLC6A4-204ENST00000578609 NDUFC1O43677 76 aa7.01□□□□□ -1.29
SLC6A4-204ENST00000578609 H0YAA0 97 aa6.94□□□□□ -1.3
SLC6A4-204ENST00000578609 LCE1DQ5T752 114 aa6.94□□□□□ -1.3
SLC6A4-204ENST00000578609 SERP2Q8N6R1 65 aa6.94□□□□□ -1.3
SLC6A4-204ENST00000578609 SNURFQ9Y675 71 aa6.91□□□□□ -1.3
SLC6A4-204ENST00000578609 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.3
SLC6A4-204ENST00000578609 C20orf197Q8N268 126 aa6.88□□□□□ -1.31
SLC6A4-204ENST00000578609 CRIPTQ9P021 101 aa6.86□□□□□ -1.31
SLC6A4-204ENST00000578609 ACYP2P14621 99 aa6.85□□□□□ -1.31
SLC6A4-204ENST00000578609 KRTAP19-6Q3LI70 58 aa6.85□□□□□ -1.31
SLC6A4-204ENST00000578609 SPANXA2-OT1Q8N9U9 137 aa6.83□□□□□ -1.32
SLC6A4-204ENST00000578609 FCGBPQ9Y6R7 5405 aaPredicted RBP6.82□□□□□ -1.32
SLC6A4-204ENST00000578609 KRTAP19-8Q3LI54 63 aa6.82□□□□□ -1.32
SLC6A4-204ENST00000578609 ADM2Q7Z4H4 148 aa6.82□□□□□ -1.32
SLC6A4-204ENST00000578609 MT1BP07438 61 aa6.79□□□□□ -1.32
SLC6A4-204ENST00000578609 COX7CP15954 63 aa6.79□□□□□ -1.32
SLC6A4-204ENST00000578609 KRTAP4-9Q9BYQ8 210 aa6.79□□□□□ -1.32
SLC6A4-204ENST00000578609 Q5VV11 94 aa6.78□□□□□ -1.32
SLC6A4-204ENST00000578609 KRTAP4-2Q9BYR5 136 aa6.73□□□□□ -1.33
SLC6A4-204ENST00000578609 P0C880 135 aa6.72□□□□□ -1.33
SLC6A4-204ENST00000578609 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
SLC6A4-204ENST00000578609 CHKB-CPT1BH3BT56 60 aa6.71□□□□□ -1.34
SLC6A4-204ENST00000578609 ANAPC13Q9BS18 74 aa6.66□□□□□ -1.34
SLC6A4-204ENST00000578609 CYSTM1Q9H1C7 97 aa6.66□□□□□ -1.34
SLC6A4-204ENST00000578609 H7BZZ5 65 aa6.65□□□□□ -1.34
SLC6A4-204ENST00000578609 R4GN34 69 aa6.63□□□□□ -1.35
SLC6A4-204ENST00000578609 COA5Q86WW8 74 aa6.6□□□□□ -1.35
SLC6A4-204ENST00000578609 MACF1Q9UPN3 7388 aaKnown RBP6.6□□□□□ -1.35
SLC6A4-204ENST00000578609 A6NN06 94 aa6.59□□□□□ -1.35
SLC6A4-204ENST00000578609 M0QZ58 72 aa6.59□□□□□ -1.35
SLC6A4-204ENST00000578609 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
SLC6A4-204ENST00000578609 KRTAP9-7A8MTY7 169 aa6.54□□□□□ -1.36
SLC6A4-204ENST00000578609 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
SLC6A4-204ENST00000578609 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
SLC6A4-204ENST00000578609 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
SLC6A4-204ENST00000578609 LINC01554Q52M75 96 aa6.45□□□□□ -1.38
SLC6A4-204ENST00000578609 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
SLC6A4-204ENST00000578609 MT1XP80297 61 aa6.42□□□□□ -1.38
SLC6A4-204ENST00000578609 ATP5EP56381 51 aaPredicted RBP6.4□□□□□ -1.38
SLC6A4-204ENST00000578609 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
SLC6A4-204ENST00000578609 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
SLC6A4-204ENST00000578609 SEC61GP60059 68 aa6.37□□□□□ -1.39
SLC6A4-204ENST00000578609 KRTAP6-3Q3LI67 103 aa6.35□□□□□ -1.39
SLC6A4-204ENST00000578609 SERP1Q9Y6X1 66 aa6.35□□□□□ -1.39
SLC6A4-204ENST00000578609 TMEM258P61165 79 aa6.31□□□□□ -1.4
SLC6A4-204ENST00000578609 LCE4AQ5TA78 99 aa6.28□□□□□ -1.4
SLC6A4-204ENST00000578609 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
SLC6A4-204ENST00000578609 A0A1B0GU33 70 aa6.25□□□□□ -1.41
SLC6A4-204ENST00000578609 A0A1B0GU69 56 aa6.25□□□□□ -1.41
SLC6A4-204ENST00000578609 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
SLC6A4-204ENST00000578609 SPATA8Q6RVD6 105 aa6.21□□□□□ -1.42
SLC6A4-204ENST00000578609 KRTAP5-9P26371 169 aa6.18□□□□□ -1.42
SLC6A4-204ENST00000578609 A0A0D9SG42 100 aa6.16□□□□□ -1.42
SLC6A4-204ENST00000578609 LINC01558Q9Y6Z2 57 aa6.14□□□□□ -1.43
SLC6A4-204ENST00000578609 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
SLC6A4-204ENST00000578609 PRR15LQ9BU68 103 aa6.13□□□□□ -1.43
SLC6A4-204ENST00000578609 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
SLC6A4-204ENST00000578609 CAMK2N1Q7Z7J9 78 aa6.12□□□□□ -1.43
SLC6A4-204ENST00000578609 KMT2DO14686 5537 aa6.11□□□□□ -1.43
SLC6A4-204ENST00000578609 KRTAP10-12P60413 245 aa6.1□□□□□ -1.43
SLC6A4-204ENST00000578609 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
SLC6A4-204ENST00000578609 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
SLC6A4-204ENST00000578609 MUC12Q9UKN1 5478 aa6.07□□□□□ -1.44
SLC6A4-204ENST00000578609 NEBP20929 6669 aa6.06□□□□□ -1.44
SLC6A4-204ENST00000578609 SPINT4Q6UDR6 99 aa6.06□□□□□ -1.44
SLC6A4-204ENST00000578609 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
SLC6A4-204ENST00000578609 A8MU10 97 aa6.03□□□□□ -1.44
SLC6A4-204ENST00000578609 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
SLC6A4-204ENST00000578609 MDN1Q9NU22 5596 aa5.98□□□□□ -1.45
SLC6A4-204ENST00000578609 UQCR11O14957 56 aa5.93□□□□□ -1.46
SLC6A4-204ENST00000578609 PCP4P48539 62 aa5.92□□□□□ -1.46
SLC6A4-204ENST00000578609 V9GYY9 64 aa5.91□□□□□ -1.46
SLC6A4-204ENST00000578609 Q1T7F1 81 aa5.89□□□□□ -1.47
SLC6A4-204ENST00000578609 SPRR2EP22531 72 aa5.86□□□□□ -1.47
SLC6A4-204ENST00000578609 SPRR2BP35325 72 aa5.86□□□□□ -1.47
SLC6A4-204ENST00000578609 SPRR2AP35326 72 aa5.86□□□□□ -1.47
SLC6A4-204ENST00000578609 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
SLC6A4-204ENST00000578609 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
SLC6A4-204ENST00000578609 PSPHP1O15172 72 aa5.82□□□□□ -1.48
SLC6A4-204ENST00000578609 MIR22HGQ0VDD5 57 aa5.81□□□□□ -1.48
SLC6A4-204ENST00000578609 RPS28P62857 69 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms