RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
SRSF1-202ENST00000578430 NDUFC1O43677 76 aa7.01□□□□□ -1.29
SRSF1-202ENST00000578430 SNURFQ9Y675 71 aa7.01□□□□□ -1.29
SRSF1-202ENST00000578430 KRTAP9-7A8MTY7 169 aa6.99□□□□□ -1.29
SRSF1-202ENST00000578430 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
SRSF1-202ENST00000578430 H7BZZ5 65 aa6.91□□□□□ -1.3
SRSF1-202ENST00000578430 HRES1P13985 223 aa6.91□□□□□ -1.3
SRSF1-202ENST00000578430 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.3
SRSF1-202ENST00000578430 CYSTM1Q9H1C7 97 aa6.9□□□□□ -1.3
SRSF1-202ENST00000578430 FAT4Q6V0I7 4981 aa6.89□□□□□ -1.31
SRSF1-202ENST00000578430 KRTAP4-1Q9BYQ7 146 aa6.89□□□□□ -1.31
SRSF1-202ENST00000578430 MPLKIPQ8TAP9 179 aa6.87□□□□□ -1.31
SRSF1-202ENST00000578430 RBM12B-AS1Q9P1G2 102 aa6.87□□□□□ -1.31
SRSF1-202ENST00000578430 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
SRSF1-202ENST00000578430 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
SRSF1-202ENST00000578430 A8MUN3 132 aa6.83□□□□□ -1.32
SRSF1-202ENST00000578430 TMEM258P61165 79 aa6.83□□□□□ -1.32
SRSF1-202ENST00000578430 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
SRSF1-202ENST00000578430 H3BS24 57 aa6.81□□□□□ -1.32
SRSF1-202ENST00000578430 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
SRSF1-202ENST00000578430 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
SRSF1-202ENST00000578430 FAM236DA0A1B0GTK5 79 aa6.77□□□□□ -1.33
SRSF1-202ENST00000578430 FAM236CP0DP71 79 aa6.77□□□□□ -1.33
SRSF1-202ENST00000578430 ACYP2P14621 99 aa6.76□□□□□ -1.33
SRSF1-202ENST00000578430 KRTAP3-1Q9BYR8 98 aa6.75□□□□□ -1.33
SRSF1-202ENST00000578430 H1FX-AS1Q4G0G2 97 aa6.73□□□□□ -1.33
SRSF1-202ENST00000578430 KRTAP19-2Q3LHN2 52 aa6.71□□□□□ -1.34
SRSF1-202ENST00000578430 COA5Q86WW8 74 aa6.64□□□□□ -1.35
SRSF1-202ENST00000578430 CHKB-CPT1BH3BT56 60 aa6.63□□□□□ -1.35
SRSF1-202ENST00000578430 S4R3F8 94 aa6.63□□□□□ -1.35
SRSF1-202ENST00000578430 SERP1Q9Y6X1 66 aa6.62□□□□□ -1.35
SRSF1-202ENST00000578430 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
SRSF1-202ENST00000578430 SPTSSBQ8NFR3 76 aa6.59□□□□□ -1.35
SRSF1-202ENST00000578430 LCA10Q71F78 164 aa6.58□□□□□ -1.36
SRSF1-202ENST00000578430 RPS28P62857 69 aaKnown RBP6.55□□□□□ -1.36
SRSF1-202ENST00000578430 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
SRSF1-202ENST00000578430 CRCT1Q9UGL9 99 aa6.54□□□□□ -1.36
SRSF1-202ENST00000578430 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
SRSF1-202ENST00000578430 MT1HP80294 61 aa6.5□□□□□ -1.37
SRSF1-202ENST00000578430 M0R2T5 61 aa6.45□□□□□ -1.38
SRSF1-202ENST00000578430 SMIM26A0A096LP01 95 aa6.43□□□□□ -1.38
SRSF1-202ENST00000578430 H0YAA0 97 aa6.39□□□□□ -1.39
SRSF1-202ENST00000578430 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
SRSF1-202ENST00000578430 V9GYY9 64 aa6.38□□□□□ -1.39
SRSF1-202ENST00000578430 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
SRSF1-202ENST00000578430 SEC61GP60059 68 aa6.35□□□□□ -1.39
SRSF1-202ENST00000578430 Q1T7F1 81 aa6.34□□□□□ -1.39
SRSF1-202ENST00000578430 PRR15LQ9BU68 103 aa6.31□□□□□ -1.4
SRSF1-202ENST00000578430 A0A1B0GU69 56 aa6.3□□□□□ -1.4
SRSF1-202ENST00000578430 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
SRSF1-202ENST00000578430 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
SRSF1-202ENST00000578430 KRTAP9-8Q9BYQ0 159 aa6.24□□□□□ -1.41
SRSF1-202ENST00000578430 MT2AP02795 61 aa6.21□□□□□ -1.42
SRSF1-202ENST00000578430 P0C880 135 aa6.21□□□□□ -1.42
SRSF1-202ENST00000578430 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
SRSF1-202ENST00000578430 PSPHP1O15172 72 aa6.17□□□□□ -1.42
SRSF1-202ENST00000578430 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
SRSF1-202ENST00000578430 A0A1B0GU33 70 aa6.16□□□□□ -1.42
SRSF1-202ENST00000578430 MT1FP04733 61 aa6.15□□□□□ -1.42
SRSF1-202ENST00000578430 Q5VV11 94 aa6.14□□□□□ -1.43
SRSF1-202ENST00000578430 M0QZ58 72 aa6.13□□□□□ -1.43
SRSF1-202ENST00000578430 R4GN34 69 aa6.11□□□□□ -1.43
SRSF1-202ENST00000578430 UQCR11O14957 56 aa6.1□□□□□ -1.43
SRSF1-202ENST00000578430 USH2AO75445 5202 aa6.06□□□□□ -1.44
SRSF1-202ENST00000578430 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
SRSF1-202ENST00000578430 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
SRSF1-202ENST00000578430 A6NED7 52 aa6.02□□□□□ -1.45
SRSF1-202ENST00000578430 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
SRSF1-202ENST00000578430 SPATA8Q6RVD6 105 aa6□□□□□ -1.45
SRSF1-202ENST00000578430 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
SRSF1-202ENST00000578430 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
SRSF1-202ENST00000578430 A6NN06 94 aa5.93□□□□□ -1.46
SRSF1-202ENST00000578430 LINC01554Q52M75 96 aa5.93□□□□□ -1.46
SRSF1-202ENST00000578430 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
SRSF1-202ENST00000578430 CDC42SE1Q9NRR8 79 aa5.91□□□□□ -1.46
SRSF1-202ENST00000578430 A0A0D9SG42 100 aa5.9□□□□□ -1.46
SRSF1-202ENST00000578430 A8MU10 97 aa5.89□□□□□ -1.47
SRSF1-202ENST00000578430 PLAC4Q8WY50 150 aa5.83□□□□□ -1.48
SRSF1-202ENST00000578430 KRTAP12-1P59990 96 aa5.82□□□□□ -1.48
SRSF1-202ENST00000578430 K7ERS5 55 aa5.81□□□□□ -1.48
SRSF1-202ENST00000578430 BRK1Q8WUW1 75 aa5.81□□□□□ -1.48
SRSF1-202ENST00000578430 MT1BP07438 61 aa5.8□□□□□ -1.48
SRSF1-202ENST00000578430 SPINT4Q6UDR6 99 aa5.8□□□□□ -1.48
SRSF1-202ENST00000578430 MACF1Q9UPN3 7388 aaKnown RBP5.79□□□□□ -1.48
SRSF1-202ENST00000578430 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
SRSF1-202ENST00000578430 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
SRSF1-202ENST00000578430 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
SRSF1-202ENST00000578430 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
SRSF1-202ENST00000578430 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
SRSF1-202ENST00000578430 PRO2289Q9P1D8 64 aa5.62□□□□□ -1.51
SRSF1-202ENST00000578430 KRTAP6-3Q3LI67 103 aa5.59□□□□□ -1.51
SRSF1-202ENST00000578430 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
SRSF1-202ENST00000578430 MT1XP80297 61 aa5.58□□□□□ -1.52
SRSF1-202ENST00000578430 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
SRSF1-202ENST00000578430 SVIPQ8NHG7 77 aa5.55□□□□□ -1.52
SRSF1-202ENST00000578430 PMAIP1Q13794 54 aa5.51□□□□□ -1.53
SRSF1-202ENST00000578430 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
SRSF1-202ENST00000578430 ROMO1P60602 79 aa5.5□□□□□ -1.53
SRSF1-202ENST00000578430 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
SRSF1-202ENST00000578430 NEBP20929 6669 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms