RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 KRTAP19-2Q3LHN2 52 aa7.52□□□□□ -1.21
IFT20-204ENST00000577498 LCA10Q71F78 164 aa7.48□□□□□ -1.21
IFT20-204ENST00000577498 V9GYY9 64 aa7.48□□□□□ -1.21
IFT20-204ENST00000577498 Q1T7F1 81 aa7.47□□□□□ -1.21
IFT20-204ENST00000577498 RNF213Q63HN8 5207 aa7.45□□□□□ -1.22
IFT20-204ENST00000577498 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
IFT20-204ENST00000577498 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
IFT20-204ENST00000577498 KRTAP9-6A0A140TA67 174 aa7.4□□□□□ -1.22
IFT20-204ENST00000577498 CSAG1Q6PB30 78 aa7.39□□□□□ -1.23
IFT20-204ENST00000577498 FLGP20930 4061 aaPredicted RBP7.37□□□□□ -1.23
IFT20-204ENST00000577498 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
IFT20-204ENST00000577498 MUC2Q02817 5179 aa7.35□□□□□ -1.23
IFT20-204ENST00000577498 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
IFT20-204ENST00000577498 A0A1B0GU69 56 aa7.31□□□□□ -1.24
IFT20-204ENST00000577498 SEC61GP60059 68 aa7.31□□□□□ -1.24
IFT20-204ENST00000577498 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
IFT20-204ENST00000577498 PSPHP1O15172 72 aa7.28□□□□□ -1.24
IFT20-204ENST00000577498 H0YAA0 97 aa7.25□□□□□ -1.25
IFT20-204ENST00000577498 Q5VV11 94 aa7.24□□□□□ -1.25
IFT20-204ENST00000577498 MT1HP80294 61 aa7.22□□□□□ -1.25
IFT20-204ENST00000577498 FAT4Q6V0I7 4981 aa7.19□□□□□ -1.26
IFT20-204ENST00000577498 KRTAP3-2Q9BYR7 98 aa7.18□□□□□ -1.26
IFT20-204ENST00000577498 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
IFT20-204ENST00000577498 ADM2Q7Z4H4 148 aa7.17□□□□□ -1.26
IFT20-204ENST00000577498 M0R2T5 61 aa7.14□□□□□ -1.27
IFT20-204ENST00000577498 A0A1B0GU33 70 aa7.11□□□□□ -1.27
IFT20-204ENST00000577498 P0C880 135 aa7.11□□□□□ -1.27
IFT20-204ENST00000577498 UQCR11O14957 56 aa7.09□□□□□ -1.27
IFT20-204ENST00000577498 A6NED7 52 aa7.08□□□□□ -1.28
IFT20-204ENST00000577498 M0QZ58 72 aa7□□□□□ -1.29
IFT20-204ENST00000577498 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
IFT20-204ENST00000577498 MIR22HGQ0VDD5 57 aa6.99□□□□□ -1.29
IFT20-204ENST00000577498 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
IFT20-204ENST00000577498 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
IFT20-204ENST00000577498 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
IFT20-204ENST00000577498 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
IFT20-204ENST00000577498 BRK1Q8WUW1 75 aa6.94□□□□□ -1.3
IFT20-204ENST00000577498 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
IFT20-204ENST00000577498 MT2AP02795 61 aa6.93□□□□□ -1.3
IFT20-204ENST00000577498 R4GN34 69 aa6.93□□□□□ -1.3
IFT20-204ENST00000577498 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
IFT20-204ENST00000577498 MT1FP04733 61 aa6.87□□□□□ -1.31
IFT20-204ENST00000577498 KRTAP10-10P60014 251 aa6.87□□□□□ -1.31
IFT20-204ENST00000577498 A8MU10 97 aa6.84□□□□□ -1.31
IFT20-204ENST00000577498 A0A0D9SG42 100 aa6.8□□□□□ -1.32
IFT20-204ENST00000577498 SPRR2GQ9BYE4 73 aa6.8□□□□□ -1.32
IFT20-204ENST00000577498 PRO0628Q9UI54 55 aa6.8□□□□□ -1.32
IFT20-204ENST00000577498 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
IFT20-204ENST00000577498 LINC01554Q52M75 96 aa6.75□□□□□ -1.33
IFT20-204ENST00000577498 A6NN06 94 aa6.74□□□□□ -1.33
IFT20-204ENST00000577498 K7ERS5 55 aa6.73□□□□□ -1.33
IFT20-204ENST00000577498 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
IFT20-204ENST00000577498 CRCT1Q9UGL9 99 aa6.73□□□□□ -1.33
IFT20-204ENST00000577498 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
IFT20-204ENST00000577498 KRTAP12-1P59990 96 aa6.7□□□□□ -1.34
IFT20-204ENST00000577498 SPINT4Q6UDR6 99 aa6.66□□□□□ -1.34
IFT20-204ENST00000577498 KRTAP12-2P59991 146 aa6.65□□□□□ -1.34
IFT20-204ENST00000577498 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
IFT20-204ENST00000577498 PMAIP1Q13794 54 aa6.58□□□□□ -1.36
IFT20-204ENST00000577498 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
IFT20-204ENST00000577498 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
IFT20-204ENST00000577498 LCE2BO14633 110 aa6.51□□□□□ -1.37
IFT20-204ENST00000577498 MT1BP07438 61 aa6.51□□□□□ -1.37
IFT20-204ENST00000577498 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
IFT20-204ENST00000577498 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
IFT20-204ENST00000577498 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
IFT20-204ENST00000577498 ROMO1P60602 79 aa6.42□□□□□ -1.38
IFT20-204ENST00000577498 C10orf95Q9H7T3 257 aa6.34□□□□□ -1.39
IFT20-204ENST00000577498 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.32□□□□□ -1.4
IFT20-204ENST00000577498 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
IFT20-204ENST00000577498 USH2AO75445 5202 aa6.31□□□□□ -1.4
IFT20-204ENST00000577498 MT1XP80297 61 aa6.29□□□□□ -1.4
IFT20-204ENST00000577498 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
IFT20-204ENST00000577498 PRO2289Q9P1D8 64 aa6.27□□□□□ -1.41
IFT20-204ENST00000577498 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
IFT20-204ENST00000577498 TNP1P09430 55 aa6.19□□□□□ -1.42
IFT20-204ENST00000577498 KRTAP19-6Q3LI70 58 aa6.17□□□□□ -1.42
IFT20-204ENST00000577498 PRAC1Q96KF2 57 aa6.13□□□□□ -1.43
IFT20-204ENST00000577498 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
IFT20-204ENST00000577498 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
IFT20-204ENST00000577498 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
IFT20-204ENST00000577498 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
IFT20-204ENST00000577498 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
IFT20-204ENST00000577498 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
IFT20-204ENST00000577498 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
IFT20-204ENST00000577498 FCGBPQ9Y6R7 5405 aaPredicted RBP5.85□□□□□ -1.47
IFT20-204ENST00000577498 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
IFT20-204ENST00000577498 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
IFT20-204ENST00000577498 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
IFT20-204ENST00000577498 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
IFT20-204ENST00000577498 NEBP20929 6669 aa5.72□□□□□ -1.49
IFT20-204ENST00000577498 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
IFT20-204ENST00000577498 KRTAP20-1Q3LI63 56 aa5.65□□□□□ -1.5
IFT20-204ENST00000577498 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
IFT20-204ENST00000577498 KMT2DO14686 5537 aa5.62□□□□□ -1.51
IFT20-204ENST00000577498 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
IFT20-204ENST00000577498 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
IFT20-204ENST00000577498 KRTAP6-3Q3LI67 103 aa5.54□□□□□ -1.52
IFT20-204ENST00000577498 MT1EP04732 61 aa5.53□□□□□ -1.52
IFT20-204ENST00000577498 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms