RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 FSIP2Q5CZC0 6907 aa5.97□□□□□ -1.45
CDK5RAP3-203ENST00000577442 KRTAP9-3Q9BYQ3 159 aa5.97□□□□□ -1.45
CDK5RAP3-203ENST00000577442 USH2AO75445 5202 aa5.94□□□□□ -1.46
CDK5RAP3-203ENST00000577442 NDUFC1O43677 76 aa5.93□□□□□ -1.46
CDK5RAP3-203ENST00000577442 KRTAP3-3Q9BYR6 98 aa5.91□□□□□ -1.46
CDK5RAP3-203ENST00000577442 DMAC1Q96GE9 116 aa5.89□□□□□ -1.47
CDK5RAP3-203ENST00000577442 LCE2BO14633 110 aa5.88□□□□□ -1.47
CDK5RAP3-203ENST00000577442 SERP2Q8N6R1 65 aa5.87□□□□□ -1.47
CDK5RAP3-203ENST00000577442 SSPOA2VEC9 5147 aa5.84□□□□□ -1.47
CDK5RAP3-203ENST00000577442 SNURFQ9Y675 71 aa5.82□□□□□ -1.48
CDK5RAP3-203ENST00000577442 H0YAA0 97 aa5.81□□□□□ -1.48
CDK5RAP3-203ENST00000577442 C20orf197Q8N268 126 aa5.81□□□□□ -1.48
CDK5RAP3-203ENST00000577442 ACYP2P14621 99 aa5.79□□□□□ -1.48
CDK5RAP3-203ENST00000577442 CRIPTQ9P021 101 aa5.78□□□□□ -1.48
CDK5RAP3-203ENST00000577442 SPANXA2-OT1Q8N9U9 137 aa5.76□□□□□ -1.49
CDK5RAP3-203ENST00000577442 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
CDK5RAP3-203ENST00000577442 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
CDK5RAP3-203ENST00000577442 COX7CP15954 63 aa5.73□□□□□ -1.49
CDK5RAP3-203ENST00000577442 ADM2Q7Z4H4 148 aa5.73□□□□□ -1.49
CDK5RAP3-203ENST00000577442 SPTSSBQ8NFR3 76 aa5.73□□□□□ -1.49
CDK5RAP3-203ENST00000577442 CHKB-CPT1BH3BT56 60 aa5.71□□□□□ -1.5
CDK5RAP3-203ENST00000577442 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
CDK5RAP3-203ENST00000577442 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
CDK5RAP3-203ENST00000577442 Q5VV11 94 aa5.68□□□□□ -1.5
CDK5RAP3-203ENST00000577442 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
CDK5RAP3-203ENST00000577442 ANAPC13Q9BS18 74 aa5.64□□□□□ -1.51
CDK5RAP3-203ENST00000577442 MT1BP07438 61 aa5.62□□□□□ -1.51
CDK5RAP3-203ENST00000577442 P0C880 135 aa5.6□□□□□ -1.51
CDK5RAP3-203ENST00000577442 R4GN34 69 aa5.6□□□□□ -1.51
CDK5RAP3-203ENST00000577442 H7BZZ5 65 aa5.58□□□□□ -1.52
CDK5RAP3-203ENST00000577442 KRTAP3-2Q9BYR7 98 aa5.58□□□□□ -1.52
CDK5RAP3-203ENST00000577442 COA5Q86WW8 74 aa5.57□□□□□ -1.52
CDK5RAP3-203ENST00000577442 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
CDK5RAP3-203ENST00000577442 M0QZ58 72 aa5.55□□□□□ -1.52
CDK5RAP3-203ENST00000577442 CYSTM1Q9H1C7 97 aa5.55□□□□□ -1.52
CDK5RAP3-203ENST00000577442 A6NN06 94 aa5.52□□□□□ -1.53
CDK5RAP3-203ENST00000577442 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
CDK5RAP3-203ENST00000577442 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
CDK5RAP3-203ENST00000577442 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
CDK5RAP3-203ENST00000577442 ATP5EP56381 51 aaPredicted RBP5.45□□□□□ -1.54
CDK5RAP3-203ENST00000577442 LINC01554Q52M75 96 aa5.45□□□□□ -1.54
CDK5RAP3-203ENST00000577442 SEC61GP60059 68 aa5.44□□□□□ -1.54
CDK5RAP3-203ENST00000577442 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
CDK5RAP3-203ENST00000577442 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
CDK5RAP3-203ENST00000577442 PRO2289Q9P1D8 64 aa5.41□□□□□ -1.54
CDK5RAP3-203ENST00000577442 SERP1Q9Y6X1 66 aa5.41□□□□□ -1.54
CDK5RAP3-203ENST00000577442 TMEM258P61165 79 aa5.35□□□□□ -1.55
CDK5RAP3-203ENST00000577442 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
CDK5RAP3-203ENST00000577442 MT1XP80297 61 aa5.33□□□□□ -1.56
CDK5RAP3-203ENST00000577442 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
CDK5RAP3-203ENST00000577442 A0A1B0GU69 56 aa5.29□□□□□ -1.56
CDK5RAP3-203ENST00000577442 A0A1B0GU33 70 aa5.28□□□□□ -1.56
CDK5RAP3-203ENST00000577442 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
CDK5RAP3-203ENST00000577442 PRR15LQ9BU68 103 aa5.23□□□□□ -1.57
CDK5RAP3-203ENST00000577442 A0A0D9SG42 100 aa5.2□□□□□ -1.58
CDK5RAP3-203ENST00000577442 SPATA8Q6RVD6 105 aa5.2□□□□□ -1.58
CDK5RAP3-203ENST00000577442 KRTAP12-2P59991 146 aa5.19□□□□□ -1.58
CDK5RAP3-203ENST00000577442 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
CDK5RAP3-203ENST00000577442 LINC01558Q9Y6Z2 57 aa5.18□□□□□ -1.58
CDK5RAP3-203ENST00000577442 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
CDK5RAP3-203ENST00000577442 PCP4P48539 62 aa5.14□□□□□ -1.59
CDK5RAP3-203ENST00000577442 SPINT4Q6UDR6 99 aa5.12□□□□□ -1.59
CDK5RAP3-203ENST00000577442 KMT2DO14686 5537 aa5.11□□□□□ -1.59
CDK5RAP3-203ENST00000577442 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
CDK5RAP3-203ENST00000577442 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
CDK5RAP3-203ENST00000577442 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.6
CDK5RAP3-203ENST00000577442 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
CDK5RAP3-203ENST00000577442 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
CDK5RAP3-203ENST00000577442 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
CDK5RAP3-203ENST00000577442 NEBP20929 6669 aa5.07□□□□□ -1.6
CDK5RAP3-203ENST00000577442 A8MU10 97 aa5.05□□□□□ -1.6
CDK5RAP3-203ENST00000577442 V9GYY9 64 aa5.05□□□□□ -1.6
CDK5RAP3-203ENST00000577442 UQCR11O14957 56 aa5.04□□□□□ -1.6
CDK5RAP3-203ENST00000577442 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
CDK5RAP3-203ENST00000577442 MDN1Q9NU22 5596 aa4.99□□□□□ -1.61
CDK5RAP3-203ENST00000577442 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
CDK5RAP3-203ENST00000577442 KRTAP4-8Q9BYQ9 185 aa4.99□□□□□ -1.61
CDK5RAP3-203ENST00000577442 Q1T7F1 81 aa4.97□□□□□ -1.61
CDK5RAP3-203ENST00000577442 PSPHP1O15172 72 aa4.92□□□□□ -1.62
CDK5RAP3-203ENST00000577442 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
CDK5RAP3-203ENST00000577442 RPS28P62857 69 aaKnown RBP4.91□□□□□ -1.62
CDK5RAP3-203ENST00000577442 SPRR2EP22531 72 aa4.89□□□□□ -1.63
CDK5RAP3-203ENST00000577442 SPRR2BP35325 72 aa4.89□□□□□ -1.63
CDK5RAP3-203ENST00000577442 SPRR2AP35326 72 aa4.89□□□□□ -1.63
CDK5RAP3-203ENST00000577442 K7ERS5 55 aa4.86□□□□□ -1.63
CDK5RAP3-203ENST00000577442 TNP1P09430 55 aa4.84□□□□□ -1.63
CDK5RAP3-203ENST00000577442 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
CDK5RAP3-203ENST00000577442 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
CDK5RAP3-203ENST00000577442 A6NED7 52 aa4.81□□□□□ -1.64
CDK5RAP3-203ENST00000577442 KRTAP20-1Q3LI63 56 aa4.8□□□□□ -1.64
CDK5RAP3-203ENST00000577442 SPRR2DP22532 72 aa4.74□□□□□ -1.65
CDK5RAP3-203ENST00000577442 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
CDK5RAP3-203ENST00000577442 MT1EP04732 61 aa4.72□□□□□ -1.65
CDK5RAP3-203ENST00000577442 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
CDK5RAP3-203ENST00000577442 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
CDK5RAP3-203ENST00000577442 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
CDK5RAP3-203ENST00000577442 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
CDK5RAP3-203ENST00000577442 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
CDK5RAP3-203ENST00000577442 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.67
CDK5RAP3-203ENST00000577442 CDC42SE1Q9NRR8 79 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms