RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
LITAF-217ENST00000575426 FSIP2Q5CZC0 6907 aa7.11□□□□□ -1.27
LITAF-217ENST00000575426 NDUFC1O43677 76 aa7.09□□□□□ -1.27
LITAF-217ENST00000575426 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
LITAF-217ENST00000575426 LCE2BO14633 110 aa7.05□□□□□ -1.28
LITAF-217ENST00000575426 DMAC1Q96GE9 116 aa7.01□□□□□ -1.29
LITAF-217ENST00000575426 SERP2Q8N6R1 65 aa7□□□□□ -1.29
LITAF-217ENST00000575426 SNURFQ9Y675 71 aa6.97□□□□□ -1.29
LITAF-217ENST00000575426 ACYP2P14621 99 aa6.95□□□□□ -1.3
LITAF-217ENST00000575426 C20orf197Q8N268 126 aa6.95□□□□□ -1.3
LITAF-217ENST00000575426 USH2AO75445 5202 aa6.93□□□□□ -1.3
LITAF-217ENST00000575426 H0YAA0 97 aa6.92□□□□□ -1.3
LITAF-217ENST00000575426 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
LITAF-217ENST00000575426 ADM2Q7Z4H4 148 aa6.87□□□□□ -1.31
LITAF-217ENST00000575426 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
LITAF-217ENST00000575426 COX7CP15954 63 aa6.85□□□□□ -1.31
LITAF-217ENST00000575426 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
LITAF-217ENST00000575426 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
LITAF-217ENST00000575426 CHKB-CPT1BH3BT56 60 aa6.84□□□□□ -1.31
LITAF-217ENST00000575426 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.31
LITAF-217ENST00000575426 SSPOA2VEC9 5147 aa6.81□□□□□ -1.32
LITAF-217ENST00000575426 Q5VV11 94 aa6.8□□□□□ -1.32
LITAF-217ENST00000575426 KRTAP19-6Q3LI70 58 aa6.78□□□□□ -1.32
LITAF-217ENST00000575426 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
LITAF-217ENST00000575426 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
LITAF-217ENST00000575426 MT1BP07438 61 aa6.71□□□□□ -1.34
LITAF-217ENST00000575426 P0C880 135 aa6.71□□□□□ -1.34
LITAF-217ENST00000575426 R4GN34 69 aa6.71□□□□□ -1.34
LITAF-217ENST00000575426 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
LITAF-217ENST00000575426 H7BZZ5 65 aa6.66□□□□□ -1.34
LITAF-217ENST00000575426 FCGBPQ9Y6R7 5405 aaPredicted RBP6.65□□□□□ -1.34
LITAF-217ENST00000575426 M0QZ58 72 aa6.65□□□□□ -1.34
LITAF-217ENST00000575426 COA5Q86WW8 74 aa6.65□□□□□ -1.34
LITAF-217ENST00000575426 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.63□□□□□ -1.35
LITAF-217ENST00000575426 CYSTM1Q9H1C7 97 aa6.63□□□□□ -1.35
LITAF-217ENST00000575426 A6NN06 94 aa6.62□□□□□ -1.35
LITAF-217ENST00000575426 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
LITAF-217ENST00000575426 CCDC179H3BU77 68 aa6.56□□□□□ -1.36
LITAF-217ENST00000575426 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
LITAF-217ENST00000575426 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
LITAF-217ENST00000575426 SEC61GP60059 68 aa6.53□□□□□ -1.36
LITAF-217ENST00000575426 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
LITAF-217ENST00000575426 SERP1Q9Y6X1 66 aa6.5□□□□□ -1.37
LITAF-217ENST00000575426 ATP5EP56381 51 aaPredicted RBP6.46□□□□□ -1.38
LITAF-217ENST00000575426 PRO2289Q9P1D8 64 aa6.46□□□□□ -1.38
LITAF-217ENST00000575426 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
LITAF-217ENST00000575426 TMEM258P61165 79 aa6.36□□□□□ -1.39
LITAF-217ENST00000575426 MT1XP80297 61 aa6.35□□□□□ -1.39
LITAF-217ENST00000575426 A0A1B0GU69 56 aa6.34□□□□□ -1.39
LITAF-217ENST00000575426 A0A1B0GU33 70 aa6.33□□□□□ -1.4
LITAF-217ENST00000575426 PCP4P48539 62 aa6.33□□□□□ -1.4
LITAF-217ENST00000575426 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
LITAF-217ENST00000575426 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
LITAF-217ENST00000575426 SYNE2Q8WXH0 6885 aaKnown RBP6.29□□□□□ -1.4
LITAF-217ENST00000575426 SPATA8Q6RVD6 105 aa6.26□□□□□ -1.41
LITAF-217ENST00000575426 PRR15LQ9BU68 103 aa6.25□□□□□ -1.41
LITAF-217ENST00000575426 A0A0D9SG42 100 aa6.24□□□□□ -1.41
LITAF-217ENST00000575426 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
LITAF-217ENST00000575426 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
LITAF-217ENST00000575426 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
LITAF-217ENST00000575426 KRTAP12-2P59991 146 aa6.18□□□□□ -1.42
LITAF-217ENST00000575426 SPINT4Q6UDR6 99 aa6.17□□□□□ -1.42
LITAF-217ENST00000575426 KRTAP5-9P26371 169 aa6.08□□□□□ -1.44
LITAF-217ENST00000575426 KRTAP12-1P59990 96 aa6.08□□□□□ -1.44
LITAF-217ENST00000575426 KRTAP10-7P60409 375 aaPredicted RBP6.08□□□□□ -1.44
LITAF-217ENST00000575426 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
LITAF-217ENST00000575426 A8MU10 97 aa6.06□□□□□ -1.44
LITAF-217ENST00000575426 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
LITAF-217ENST00000575426 UQCR11O14957 56 aa6.03□□□□□ -1.44
LITAF-217ENST00000575426 V9GYY9 64 aa6.03□□□□□ -1.44
LITAF-217ENST00000575426 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
LITAF-217ENST00000575426 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
LITAF-217ENST00000575426 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
LITAF-217ENST00000575426 KMT2DO14686 5537 aa5.98□□□□□ -1.45
LITAF-217ENST00000575426 Q1T7F1 81 aa5.94□□□□□ -1.46
LITAF-217ENST00000575426 PSPHP1O15172 72 aa5.91□□□□□ -1.46
LITAF-217ENST00000575426 MIR22HGQ0VDD5 57 aa5.9□□□□□ -1.46
LITAF-217ENST00000575426 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
LITAF-217ENST00000575426 SPRR2EP22531 72 aa5.87□□□□□ -1.47
LITAF-217ENST00000575426 SPRR2BP35325 72 aa5.87□□□□□ -1.47
LITAF-217ENST00000575426 SPRR2AP35326 72 aa5.87□□□□□ -1.47
LITAF-217ENST00000575426 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
LITAF-217ENST00000575426 NEBP20929 6669 aa5.84□□□□□ -1.47
LITAF-217ENST00000575426 K7ERS5 55 aa5.81□□□□□ -1.48
LITAF-217ENST00000575426 TNP1P09430 55 aa5.79□□□□□ -1.48
LITAF-217ENST00000575426 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
LITAF-217ENST00000575426 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
LITAF-217ENST00000575426 MDN1Q9NU22 5596 aa5.76□□□□□ -1.49
LITAF-217ENST00000575426 A6NED7 52 aa5.75□□□□□ -1.49
LITAF-217ENST00000575426 KRTAP20-1Q3LI63 56 aa5.74□□□□□ -1.49
LITAF-217ENST00000575426 SPRR2DP22532 72 aa5.68□□□□□ -1.5
LITAF-217ENST00000575426 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
LITAF-217ENST00000575426 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
LITAF-217ENST00000575426 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
LITAF-217ENST00000575426 MT1EP04732 61 aa5.62□□□□□ -1.51
LITAF-217ENST00000575426 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
LITAF-217ENST00000575426 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
LITAF-217ENST00000575426 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
LITAF-217ENST00000575426 KRTAP19-3Q7Z4W3 81 aa5.55□□□□□ -1.52
LITAF-217ENST00000575426 CDC42SE1Q9NRR8 79 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms