RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 NDUFC1O43677 76 aa8.72□□□□□ -1.01
CLDN7-208ENST00000575313 CYSTM1Q9H1C7 97 aa8.72□□□□□ -1.01
CLDN7-208ENST00000575313 SPANXA2-OT1Q8N9U9 137 aa8.69□□□□□ -1.02
CLDN7-208ENST00000575313 H7BZZ5 65 aa8.68□□□□□ -1.02
CLDN7-208ENST00000575313 DMAC1Q96GE9 116 aa8.68□□□□□ -1.02
CLDN7-208ENST00000575313 KRTAP9-8Q9BYQ0 159 aa8.66□□□□□ -1.02
CLDN7-208ENST00000575313 S4R3F8 94 aa8.64□□□□□ -1.03
CLDN7-208ENST00000575313 FSIP2Q5CZC0 6907 aa8.63□□□□□ -1.03
CLDN7-208ENST00000575313 ACYP2P14621 99 aa8.61□□□□□ -1.03
CLDN7-208ENST00000575313 LCA10Q71F78 164 aa8.6□□□□□ -1.03
CLDN7-208ENST00000575313 MT2AP02795 61 aa8.58□□□□□ -1.04
CLDN7-208ENST00000575313 CRCT1Q9UGL9 99 aa8.57□□□□□ -1.04
CLDN7-208ENST00000575313 PCP4P48539 62 aa8.55□□□□□ -1.04
CLDN7-208ENST00000575313 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
CLDN7-208ENST00000575313 MT1FP04733 61 aa8.5□□□□□ -1.05
CLDN7-208ENST00000575313 KRTAP10-10P60014 251 aa8.5□□□□□ -1.05
CLDN7-208ENST00000575313 CHKB-CPT1BH3BT56 60 aa8.45□□□□□ -1.06
CLDN7-208ENST00000575313 TMEM258P61165 79 aa8.45□□□□□ -1.06
CLDN7-208ENST00000575313 ATP5EP56381 51 aaPredicted RBP8.44□□□□□ -1.06
CLDN7-208ENST00000575313 COA5Q86WW8 74 aa8.43□□□□□ -1.06
CLDN7-208ENST00000575313 SPTSSBQ8NFR3 76 aa8.38□□□□□ -1.07
CLDN7-208ENST00000575313 KRTAP9-3Q9BYQ3 159 aa8.38□□□□□ -1.07
CLDN7-208ENST00000575313 LCE2BO14633 110 aa8.26□□□□□ -1.09
CLDN7-208ENST00000575313 H0YAA0 97 aa8.25□□□□□ -1.09
CLDN7-208ENST00000575313 ADM2Q7Z4H4 148 aa8.21□□□□□ -1.1
CLDN7-208ENST00000575313 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
CLDN7-208ENST00000575313 USH2AO75445 5202 aa8.18□□□□□ -1.1
CLDN7-208ENST00000575313 P0C880 135 aa8.11□□□□□ -1.11
CLDN7-208ENST00000575313 KRTAP19-1Q8IUB9 90 aa8.08□□□□□ -1.12
CLDN7-208ENST00000575313 CRIPTQ9P021 101 aa8.08□□□□□ -1.12
CLDN7-208ENST00000575313 KRTAP9-7A8MTY7 169 aa8.05□□□□□ -1.12
CLDN7-208ENST00000575313 SEC61GP60059 68 aa8.05□□□□□ -1.12
CLDN7-208ENST00000575313 SPRR2GQ9BYE4 73 aa8.05□□□□□ -1.12
CLDN7-208ENST00000575313 SSPOA2VEC9 5147 aa8.03□□□□□ -1.12
CLDN7-208ENST00000575313 RPS28P62857 69 aaKnown RBP8.01□□□□□ -1.13
CLDN7-208ENST00000575313 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.99□□□□□ -1.13
CLDN7-208ENST00000575313 A0A1B0GU69 56 aa7.98□□□□□ -1.13
CLDN7-208ENST00000575313 LINC01558Q9Y6Z2 57 aa7.98□□□□□ -1.13
CLDN7-208ENST00000575313 KRTAP19-8Q3LI54 63 aa7.95□□□□□ -1.14
CLDN7-208ENST00000575313 KRTAP19-6Q3LI70 58 aa7.95□□□□□ -1.14
CLDN7-208ENST00000575313 SMIM26A0A096LP01 95 aa7.94□□□□□ -1.14
CLDN7-208ENST00000575313 Q5VV11 94 aa7.94□□□□□ -1.14
CLDN7-208ENST00000575313 R4GN34 69 aa7.94□□□□□ -1.14
CLDN7-208ENST00000575313 M0QZ58 72 aa7.92□□□□□ -1.14
CLDN7-208ENST00000575313 PRR15LQ9BU68 103 aa7.9□□□□□ -1.14
CLDN7-208ENST00000575313 MT1BP07438 61 aa7.88□□□□□ -1.15
CLDN7-208ENST00000575313 V9GYY9 64 aa7.88□□□□□ -1.15
CLDN7-208ENST00000575313 A0A1B0GU33 70 aa7.87□□□□□ -1.15
CLDN7-208ENST00000575313 Q1T7F1 81 aa7.87□□□□□ -1.15
CLDN7-208ENST00000575313 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.16
CLDN7-208ENST00000575313 KRTAP13-4Q3LI77 160 aa7.81□□□□□ -1.16
CLDN7-208ENST00000575313 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
CLDN7-208ENST00000575313 PSPHP1O15172 72 aa7.75□□□□□ -1.17
CLDN7-208ENST00000575313 SPATA8Q6RVD6 105 aa7.75□□□□□ -1.17
CLDN7-208ENST00000575313 A6NN06 94 aa7.71□□□□□ -1.18
CLDN7-208ENST00000575313 UQCR11O14957 56 aa7.67□□□□□ -1.18
CLDN7-208ENST00000575313 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
CLDN7-208ENST00000575313 A0A0D9SG42 100 aa7.65□□□□□ -1.18
CLDN7-208ENST00000575313 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
CLDN7-208ENST00000575313 SYNE2Q8WXH0 6885 aaKnown RBP7.62□□□□□ -1.19
CLDN7-208ENST00000575313 MACF1Q9UPN3 7388 aaKnown RBP7.61□□□□□ -1.19
CLDN7-208ENST00000575313 A8MU10 97 aa7.59□□□□□ -1.19
CLDN7-208ENST00000575313 MIR22HGQ0VDD5 57 aa7.55□□□□□ -1.2
CLDN7-208ENST00000575313 PRO2289Q9P1D8 64 aa7.55□□□□□ -1.2
CLDN7-208ENST00000575313 A6NED7 52 aa7.52□□□□□ -1.21
CLDN7-208ENST00000575313 KRTAP12-1P59990 96 aa7.5□□□□□ -1.21
CLDN7-208ENST00000575313 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
CLDN7-208ENST00000575313 MT1XP80297 61 aa7.47□□□□□ -1.21
CLDN7-208ENST00000575313 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
CLDN7-208ENST00000575313 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.22
CLDN7-208ENST00000575313 KRTAP6-3Q3LI67 103 aa7.36□□□□□ -1.23
CLDN7-208ENST00000575313 CDC42SE1Q9NRR8 79 aa7.32□□□□□ -1.24
CLDN7-208ENST00000575313 K7ERS5 55 aa7.29□□□□□ -1.24
CLDN7-208ENST00000575313 NEBP20929 6669 aa7.2□□□□□ -1.26
CLDN7-208ENST00000575313 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
CLDN7-208ENST00000575313 SVIPQ8NHG7 77 aa7.15□□□□□ -1.26
CLDN7-208ENST00000575313 BRK1Q8WUW1 75 aa7.14□□□□□ -1.27
CLDN7-208ENST00000575313 MUC12Q9UKN1 5478 aa7.12□□□□□ -1.27
CLDN7-208ENST00000575313 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
CLDN7-208ENST00000575313 C10orf95Q9H7T3 257 aa7.12□□□□□ -1.27
CLDN7-208ENST00000575313 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
CLDN7-208ENST00000575313 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
CLDN7-208ENST00000575313 KMT2DO14686 5537 aa7.06□□□□□ -1.28
CLDN7-208ENST00000575313 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
CLDN7-208ENST00000575313 KRTAP20-1Q3LI63 56 aa7.02□□□□□ -1.29
CLDN7-208ENST00000575313 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
CLDN7-208ENST00000575313 SPRR2FQ96RM1 72 aa7□□□□□ -1.29
CLDN7-208ENST00000575313 TNP1P09430 55 aa6.98□□□□□ -1.29
CLDN7-208ENST00000575313 ROMO1P60602 79 aa6.92□□□□□ -1.3
CLDN7-208ENST00000575313 KRTAP25-1Q3LHN0 102 aa6.88□□□□□ -1.31
CLDN7-208ENST00000575313 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
CLDN7-208ENST00000575313 SPRR2EP22531 72 aa6.83□□□□□ -1.32
CLDN7-208ENST00000575313 SPRR2BP35325 72 aa6.83□□□□□ -1.32
CLDN7-208ENST00000575313 SPRR2AP35326 72 aa6.83□□□□□ -1.32
CLDN7-208ENST00000575313 LCE1AQ5T7P2 110 aa6.78□□□□□ -1.32
CLDN7-208ENST00000575313 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
CLDN7-208ENST00000575313 PMAIP1Q13794 54 aa6.76□□□□□ -1.33
CLDN7-208ENST00000575313 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
CLDN7-208ENST00000575313 KRTAP2-3P0C7H8 128 aa6.71□□□□□ -1.34
CLDN7-208ENST00000575313 KRTAP2-4Q9BYR9 128 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 250.1 ms