RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 A0A1B0GU69 56 aa8.68□□□□□ -1.02
SMPD3-212ENST00000574662 SEC61GP60059 68 aa8.68□□□□□ -1.02
SMPD3-212ENST00000574662 C7orf65Q6ZTY9 151 aa8.65□□□□□ -1.02
SMPD3-212ENST00000574662 TPRXLQ17RH7 258 aa8.64□□□□□ -1.03
SMPD3-212ENST00000574662 LRP2P98164 4655 aa8.58□□□□□ -1.04
SMPD3-212ENST00000574662 XP32Q5T750 250 aa8.58□□□□□ -1.04
SMPD3-212ENST00000574662 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
SMPD3-212ENST00000574662 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
SMPD3-212ENST00000574662 UQCR11O14957 56 aa8.54□□□□□ -1.04
SMPD3-212ENST00000574662 A8MUU9 505 aa8.5□□□□□ -1.05
SMPD3-212ENST00000574662 MIR22HGQ0VDD5 57 aa8.5□□□□□ -1.05
SMPD3-212ENST00000574662 C20orf166-AS1Q96NR2 134 aa8.5□□□□□ -1.05
SMPD3-212ENST00000574662 RBM12B-AS1Q9P1G2 102 aa8.47□□□□□ -1.05
SMPD3-212ENST00000574662 RPL37P61927 97 aaKnown RBP8.46□□□□□ -1.05
SMPD3-212ENST00000574662 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
SMPD3-212ENST00000574662 SEC61BP60468 96 aaKnown RBP8.34□□□□□ -1.07
SMPD3-212ENST00000574662 RNF213Q63HN8 5207 aa8.31□□□□□ -1.08
SMPD3-212ENST00000574662 KRTAP4-1Q9BYQ7 146 aa8.29□□□□□ -1.08
SMPD3-212ENST00000574662 KRTAP3-1Q9BYR8 98 aa8.25□□□□□ -1.09
SMPD3-212ENST00000574662 MUC2Q02817 5179 aa8.23□□□□□ -1.09
SMPD3-212ENST00000574662 PRAC1Q96KF2 57 aa8.23□□□□□ -1.09
SMPD3-212ENST00000574662 COX6B2Q6YFQ2 88 aa8.22□□□□□ -1.09
SMPD3-212ENST00000574662 ADM2Q7Z4H4 148 aa8.19□□□□□ -1.1
SMPD3-212ENST00000574662 A0A1B0GU33 70 aa8.18□□□□□ -1.1
SMPD3-212ENST00000574662 H0YAA0 97 aa8.18□□□□□ -1.1
SMPD3-212ENST00000574662 H1FX-AS1Q4G0G2 97 aa8.17□□□□□ -1.1
SMPD3-212ENST00000574662 LINC01554Q52M75 96 aa8.07□□□□□ -1.12
SMPD3-212ENST00000574662 CSAG1Q6PB30 78 aa8.04□□□□□ -1.12
SMPD3-212ENST00000574662 K7ERS5 55 aa8.02□□□□□ -1.13
SMPD3-212ENST00000574662 KRTAP19-2Q3LHN2 52 aa8.01□□□□□ -1.13
SMPD3-212ENST00000574662 LCE2CQ5TA81 110 aa7.94□□□□□ -1.14
SMPD3-212ENST00000574662 S4R3F8 94 aa7.93□□□□□ -1.14
SMPD3-212ENST00000574662 FAT4Q6V0I7 4981 aa7.93□□□□□ -1.14
SMPD3-212ENST00000574662 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
SMPD3-212ENST00000574662 KRTAP25-1Q3LHN0 102 aa7.89□□□□□ -1.15
SMPD3-212ENST00000574662 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
SMPD3-212ENST00000574662 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
SMPD3-212ENST00000574662 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
SMPD3-212ENST00000574662 FLGP20930 4061 aaPredicted RBP7.81□□□□□ -1.16
SMPD3-212ENST00000574662 ROMO1P60602 79 aa7.79□□□□□ -1.16
SMPD3-212ENST00000574662 MT1HP80294 61 aa7.76□□□□□ -1.17
SMPD3-212ENST00000574662 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
SMPD3-212ENST00000574662 A0A0D9SG42 100 aa7.71□□□□□ -1.18
SMPD3-212ENST00000574662 P0C880 135 aa7.69□□□□□ -1.18
SMPD3-212ENST00000574662 M0R2T5 61 aa7.64□□□□□ -1.19
SMPD3-212ENST00000574662 KRTAP9-2Q9BYQ4 174 aa7.59□□□□□ -1.19
SMPD3-212ENST00000574662 M0QZ58 72 aa7.59□□□□□ -1.2
SMPD3-212ENST00000574662 CRIPTQ9P021 101 aa7.59□□□□□ -1.2
SMPD3-212ENST00000574662 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
SMPD3-212ENST00000574662 KRTAP12-1P59990 96 aa7.52□□□□□ -1.21
SMPD3-212ENST00000574662 LORP23490 312 aaPredicted RBP7.49□□□□□ -1.21
SMPD3-212ENST00000574662 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
SMPD3-212ENST00000574662 KRTAP9-8Q9BYQ0 159 aa7.46□□□□□ -1.21
SMPD3-212ENST00000574662 LCE2DQ5TA82 110 aaPredicted RBP7.41□□□□□ -1.22
SMPD3-212ENST00000574662 MT2AP02795 61 aa7.4□□□□□ -1.23
SMPD3-212ENST00000574662 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
SMPD3-212ENST00000574662 MT1FP04733 61 aa7.36□□□□□ -1.23
SMPD3-212ENST00000574662 R4GN34 69 aa7.33□□□□□ -1.24
SMPD3-212ENST00000574662 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
SMPD3-212ENST00000574662 H3BS24 57 aa7.31□□□□□ -1.24
SMPD3-212ENST00000574662 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
SMPD3-212ENST00000574662 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
SMPD3-212ENST00000574662 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
SMPD3-212ENST00000574662 KRTAP15-1Q3LI76 137 aa7.16□□□□□ -1.26
SMPD3-212ENST00000574662 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
SMPD3-212ENST00000574662 KRTAP19-1Q8IUB9 90 aa7.13□□□□□ -1.27
SMPD3-212ENST00000574662 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
SMPD3-212ENST00000574662 LCE2BO14633 110 aa7.06□□□□□ -1.28
SMPD3-212ENST00000574662 USH2AO75445 5202 aa6.98□□□□□ -1.29
SMPD3-212ENST00000574662 PP632Q6XCG6 107 aa6.97□□□□□ -1.29
SMPD3-212ENST00000574662 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
SMPD3-212ENST00000574662 KRTAP19-8Q3LI54 63 aa6.95□□□□□ -1.3
SMPD3-212ENST00000574662 NDUFAF8A1L188 74 aa6.94□□□□□ -1.3
SMPD3-212ENST00000574662 MT1BP07438 61 aa6.9□□□□□ -1.31
SMPD3-212ENST00000574662 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
SMPD3-212ENST00000574662 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
SMPD3-212ENST00000574662 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
SMPD3-212ENST00000574662 TNP1P09430 55 aa6.75□□□□□ -1.33
SMPD3-212ENST00000574662 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
SMPD3-212ENST00000574662 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
SMPD3-212ENST00000574662 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
SMPD3-212ENST00000574662 LUZP6Q538Z0 58 aa6.61□□□□□ -1.35
SMPD3-212ENST00000574662 MT1XP80297 61 aa6.6□□□□□ -1.35
SMPD3-212ENST00000574662 KRTAP9-7A8MTY7 169 aa6.59□□□□□ -1.35
SMPD3-212ENST00000574662 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
SMPD3-212ENST00000574662 PRO2289Q9P1D8 64 aa6.49□□□□□ -1.37
SMPD3-212ENST00000574662 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
SMPD3-212ENST00000574662 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
SMPD3-212ENST00000574662 MACF1Q9UPN3 7388 aaKnown RBP6.43□□□□□ -1.38
SMPD3-212ENST00000574662 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.4
SMPD3-212ENST00000574662 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
SMPD3-212ENST00000574662 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
SMPD3-212ENST00000574662 KRTAP6-3Q3LI67 103 aa6.28□□□□□ -1.4
SMPD3-212ENST00000574662 KRTAP10-12P60413 245 aa6.26□□□□□ -1.41
SMPD3-212ENST00000574662 KMT2DO14686 5537 aa6.22□□□□□ -1.41
SMPD3-212ENST00000574662 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
SMPD3-212ENST00000574662 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
SMPD3-212ENST00000574662 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
SMPD3-212ENST00000574662 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
SMPD3-212ENST00000574662 MUC12Q9UKN1 5478 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms