RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
NDE1-208ENST00000573694 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
NDE1-208ENST00000573694 SMIM26A0A096LP01 95 aa4.88□□□□□ -1.63
NDE1-208ENST00000573694 COX6B2Q6YFQ2 88 aa4.88□□□□□ -1.63
NDE1-208ENST00000573694 MT1HP80294 61 aa4.87□□□□□ -1.63
NDE1-208ENST00000573694 A8MUN3 132 aa4.86□□□□□ -1.63
NDE1-208ENST00000573694 CHKB-CPT1BH3BT56 60 aa4.85□□□□□ -1.63
NDE1-208ENST00000573694 MPLKIPQ8TAP9 179 aa4.84□□□□□ -1.63
NDE1-208ENST00000573694 LORP23490 312 aaPredicted RBP4.82□□□□□ -1.64
NDE1-208ENST00000573694 M0R2T5 61 aa4.8□□□□□ -1.64
NDE1-208ENST00000573694 KRTAP10-6P60371 365 aaPredicted RBP4.8□□□□□ -1.64
NDE1-208ENST00000573694 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
NDE1-208ENST00000573694 Q1T7F1 81 aa4.78□□□□□ -1.64
NDE1-208ENST00000573694 RBM12B-AS1Q9P1G2 102 aa4.76□□□□□ -1.65
NDE1-208ENST00000573694 LINC01558Q9Y6Z2 57 aa4.75□□□□□ -1.65
NDE1-208ENST00000573694 PSPHP1O15172 72 aa4.74□□□□□ -1.65
NDE1-208ENST00000573694 H1FX-AS1Q4G0G2 97 aa4.74□□□□□ -1.65
NDE1-208ENST00000573694 LCA10Q71F78 164 aa4.74□□□□□ -1.65
NDE1-208ENST00000573694 PRR15LQ9BU68 103 aa4.74□□□□□ -1.65
NDE1-208ENST00000573694 S4R3F8 94 aa4.74□□□□□ -1.65
NDE1-208ENST00000573694 KRTAP3-3Q9BYR6 98 aa4.73□□□□□ -1.65
NDE1-208ENST00000573694 V9GYY9 64 aa4.73□□□□□ -1.65
NDE1-208ENST00000573694 Q5VV11 94 aa4.7□□□□□ -1.66
NDE1-208ENST00000573694 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
NDE1-208ENST00000573694 A0A1B0GU69 56 aa4.65□□□□□ -1.67
NDE1-208ENST00000573694 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
NDE1-208ENST00000573694 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
NDE1-208ENST00000573694 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
NDE1-208ENST00000573694 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
NDE1-208ENST00000573694 SEC61GP60059 68 aa4.58□□□□□ -1.68
NDE1-208ENST00000573694 CSAG1Q6PB30 78 aa4.58□□□□□ -1.68
NDE1-208ENST00000573694 A6NED7 52 aa4.57□□□□□ -1.68
NDE1-208ENST00000573694 KRTAP3-2Q9BYR7 98 aa4.57□□□□□ -1.68
NDE1-208ENST00000573694 A8MU10 97 aa4.56□□□□□ -1.68
NDE1-208ENST00000573694 SVIPQ8NHG7 77 aa4.55□□□□□ -1.68
NDE1-208ENST00000573694 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
NDE1-208ENST00000573694 P0C880 135 aa4.54□□□□□ -1.68
NDE1-208ENST00000573694 ADM2Q7Z4H4 148 aa4.54□□□□□ -1.68
NDE1-208ENST00000573694 USH2AO75445 5202 aa4.54□□□□□ -1.68
NDE1-208ENST00000573694 MT2AP02795 61 aa4.52□□□□□ -1.69
NDE1-208ENST00000573694 A0A1B0GU33 70 aa4.51□□□□□ -1.69
NDE1-208ENST00000573694 H0YAA0 97 aa4.49□□□□□ -1.69
NDE1-208ENST00000573694 UQCR11O14957 56 aa4.49□□□□□ -1.69
NDE1-208ENST00000573694 KRTAP10-10P60014 251 aa4.49□□□□□ -1.69
NDE1-208ENST00000573694 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
NDE1-208ENST00000573694 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
NDE1-208ENST00000573694 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
NDE1-208ENST00000573694 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
NDE1-208ENST00000573694 SPATA8Q6RVD6 105 aa4.47□□□□□ -1.69
NDE1-208ENST00000573694 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
NDE1-208ENST00000573694 MT1FP04733 61 aa4.45□□□□□ -1.7
NDE1-208ENST00000573694 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
NDE1-208ENST00000573694 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
NDE1-208ENST00000573694 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
NDE1-208ENST00000573694 LCE2BO14633 110 aa4.41□□□□□ -1.7
NDE1-208ENST00000573694 A0A0D9SG42 100 aa4.38□□□□□ -1.71
NDE1-208ENST00000573694 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
NDE1-208ENST00000573694 KRTAP19-1Q8IUB9 90 aa4.38□□□□□ -1.71
NDE1-208ENST00000573694 M0QZ58 72 aa4.37□□□□□ -1.71
NDE1-208ENST00000573694 R4GN34 69 aa4.34□□□□□ -1.71
NDE1-208ENST00000573694 LINC01554Q52M75 96 aa4.3□□□□□ -1.72
NDE1-208ENST00000573694 A6NN06 94 aa4.29□□□□□ -1.72
NDE1-208ENST00000573694 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
NDE1-208ENST00000573694 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
NDE1-208ENST00000573694 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
NDE1-208ENST00000573694 CRIPTQ9P021 101 aa4.25□□□□□ -1.73
NDE1-208ENST00000573694 SPINT4Q6UDR6 99 aa4.24□□□□□ -1.73
NDE1-208ENST00000573694 K7ERS5 55 aa4.22□□□□□ -1.73
NDE1-208ENST00000573694 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
NDE1-208ENST00000573694 SPRR2GQ9BYE4 73 aa4.21□□□□□ -1.74
NDE1-208ENST00000573694 NEBP20929 6669 aa4.21□□□□□ -1.74
NDE1-208ENST00000573694 KRTAP19-8Q3LI54 63 aa4.18□□□□□ -1.74
NDE1-208ENST00000573694 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
NDE1-208ENST00000573694 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
NDE1-208ENST00000573694 MT1BP07438 61 aa4.09□□□□□ -1.75
NDE1-208ENST00000573694 ROMO1P60602 79 aa4.09□□□□□ -1.75
NDE1-208ENST00000573694 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
NDE1-208ENST00000573694 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
NDE1-208ENST00000573694 MUC12Q9UKN1 5478 aa4.08□□□□□ -1.76
NDE1-208ENST00000573694 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
NDE1-208ENST00000573694 PLAC4Q8WY50 150 aa4.06□□□□□ -1.76
NDE1-208ENST00000573694 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
NDE1-208ENST00000573694 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
NDE1-208ENST00000573694 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
NDE1-208ENST00000573694 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
NDE1-208ENST00000573694 MT1XP80297 61 aa3.96□□□□□ -1.78
NDE1-208ENST00000573694 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
NDE1-208ENST00000573694 KMT2DO14686 5537 aa3.91□□□□□ -1.78
NDE1-208ENST00000573694 MDN1Q9NU22 5596 aa3.88□□□□□ -1.79
NDE1-208ENST00000573694 TNP1P09430 55 aa3.86□□□□□ -1.79
NDE1-208ENST00000573694 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
NDE1-208ENST00000573694 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
NDE1-208ENST00000573694 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
NDE1-208ENST00000573694 KRTAP8-1Q8IUC2 63 aa3.78□□□□□ -1.8
NDE1-208ENST00000573694 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
NDE1-208ENST00000573694 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
NDE1-208ENST00000573694 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
NDE1-208ENST00000573694 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
NDE1-208ENST00000573694 SPRR2EP22531 72 aa3.73□□□□□ -1.81
NDE1-208ENST00000573694 SPRR2BP35325 72 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms