RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 MUC17Q685J3 4493 aa6.52□□□□□ -1.36
PRPF8-207ENST00000573681 HMCN2Q8NDA2 5059 aa6.52□□□□□ -1.36
PRPF8-207ENST00000573681 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
PRPF8-207ENST00000573681 LINC01558Q9Y6Z2 57 aa6.5□□□□□ -1.37
PRPF8-207ENST00000573681 HERC1Q15751 4861 aa6.5□□□□□ -1.37
PRPF8-207ENST00000573681 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
PRPF8-207ENST00000573681 S4R3F8 94 aa6.45□□□□□ -1.38
PRPF8-207ENST00000573681 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
PRPF8-207ENST00000573681 PRR15LQ9BU68 103 aa6.41□□□□□ -1.38
PRPF8-207ENST00000573681 PSPHP1O15172 72 aa6.4□□□□□ -1.38
PRPF8-207ENST00000573681 LCA10Q71F78 164 aa6.4□□□□□ -1.38
PRPF8-207ENST00000573681 A0A1B0GU69 56 aa6.39□□□□□ -1.39
PRPF8-207ENST00000573681 SEC61GP60059 68 aa6.38□□□□□ -1.39
PRPF8-207ENST00000573681 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
PRPF8-207ENST00000573681 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
PRPF8-207ENST00000573681 Q5VV11 94 aa6.35□□□□□ -1.39
PRPF8-207ENST00000573681 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
PRPF8-207ENST00000573681 KRTAP19-2Q3LHN2 52 aa6.32□□□□□ -1.4
PRPF8-207ENST00000573681 A6NED7 52 aa6.23□□□□□ -1.41
PRPF8-207ENST00000573681 UQCR11O14957 56 aa6.21□□□□□ -1.42
PRPF8-207ENST00000573681 H0YAA0 97 aa6.2□□□□□ -1.42
PRPF8-207ENST00000573681 A0A1B0GU33 70 aa6.19□□□□□ -1.42
PRPF8-207ENST00000573681 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
PRPF8-207ENST00000573681 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
PRPF8-207ENST00000573681 BRK1Q8WUW1 75 aa6.17□□□□□ -1.42
PRPF8-207ENST00000573681 ADM2Q7Z4H4 148 aa6.16□□□□□ -1.42
PRPF8-207ENST00000573681 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.42
PRPF8-207ENST00000573681 CDC42SE1Q9NRR8 79 aa6.14□□□□□ -1.43
PRPF8-207ENST00000573681 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
PRPF8-207ENST00000573681 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
PRPF8-207ENST00000573681 MUC2Q02817 5179 aa6.11□□□□□ -1.43
PRPF8-207ENST00000573681 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
PRPF8-207ENST00000573681 P0C880 135 aa6.09□□□□□ -1.43
PRPF8-207ENST00000573681 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
PRPF8-207ENST00000573681 MT1HP80294 61 aa6.05□□□□□ -1.44
PRPF8-207ENST00000573681 M0QZ58 72 aa6.04□□□□□ -1.44
PRPF8-207ENST00000573681 LORP23490 312 aaPredicted RBP6.04□□□□□ -1.44
PRPF8-207ENST00000573681 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
PRPF8-207ENST00000573681 M0R2T5 61 aa6.03□□□□□ -1.44
PRPF8-207ENST00000573681 A8MU10 97 aa6□□□□□ -1.45
PRPF8-207ENST00000573681 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
PRPF8-207ENST00000573681 CRIPTQ9P021 101 aa5.96□□□□□ -1.46
PRPF8-207ENST00000573681 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
PRPF8-207ENST00000573681 R4GN34 69 aa5.95□□□□□ -1.46
PRPF8-207ENST00000573681 K7ERS5 55 aa5.9□□□□□ -1.46
PRPF8-207ENST00000573681 A0A0D9SG42 100 aa5.87□□□□□ -1.47
PRPF8-207ENST00000573681 PMAIP1Q13794 54 aa5.87□□□□□ -1.47
PRPF8-207ENST00000573681 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
PRPF8-207ENST00000573681 MT2AP02795 61 aa5.82□□□□□ -1.48
PRPF8-207ENST00000573681 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
PRPF8-207ENST00000573681 A6NN06 94 aa5.8□□□□□ -1.48
PRPF8-207ENST00000573681 LINC01554Q52M75 96 aa5.8□□□□□ -1.48
PRPF8-207ENST00000573681 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
PRPF8-207ENST00000573681 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
PRPF8-207ENST00000573681 MT1FP04733 61 aa5.76□□□□□ -1.49
PRPF8-207ENST00000573681 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
PRPF8-207ENST00000573681 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
PRPF8-207ENST00000573681 KRTAP12-2P59991 146 aa5.74□□□□□ -1.49
PRPF8-207ENST00000573681 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
PRPF8-207ENST00000573681 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
PRPF8-207ENST00000573681 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
PRPF8-207ENST00000573681 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
PRPF8-207ENST00000573681 ROMO1P60602 79 aa5.62□□□□□ -1.51
PRPF8-207ENST00000573681 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
PRPF8-207ENST00000573681 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
PRPF8-207ENST00000573681 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
PRPF8-207ENST00000573681 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
PRPF8-207ENST00000573681 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
PRPF8-207ENST00000573681 MT1BP07438 61 aa5.48□□□□□ -1.53
PRPF8-207ENST00000573681 C10orf95Q9H7T3 257 aa5.47□□□□□ -1.53
PRPF8-207ENST00000573681 KRTAP4-12Q9BQ66 201 aa5.43□□□□□ -1.54
PRPF8-207ENST00000573681 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
PRPF8-207ENST00000573681 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
PRPF8-207ENST00000573681 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
PRPF8-207ENST00000573681 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
PRPF8-207ENST00000573681 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
PRPF8-207ENST00000573681 TNP1P09430 55 aa5.35□□□□□ -1.55
PRPF8-207ENST00000573681 PRO2289Q9P1D8 64 aa5.33□□□□□ -1.56
PRPF8-207ENST00000573681 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
PRPF8-207ENST00000573681 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
PRPF8-207ENST00000573681 MT1XP80297 61 aa5.31□□□□□ -1.56
PRPF8-207ENST00000573681 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
PRPF8-207ENST00000573681 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
PRPF8-207ENST00000573681 USH2AO75445 5202 aa5.21□□□□□ -1.57
PRPF8-207ENST00000573681 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
PRPF8-207ENST00000573681 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
PRPF8-207ENST00000573681 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
PRPF8-207ENST00000573681 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
PRPF8-207ENST00000573681 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
PRPF8-207ENST00000573681 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
PRPF8-207ENST00000573681 SSPOA2VEC9 5147 aa5.04□□□□□ -1.6
PRPF8-207ENST00000573681 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
PRPF8-207ENST00000573681 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
PRPF8-207ENST00000573681 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
PRPF8-207ENST00000573681 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
PRPF8-207ENST00000573681 FSIP2Q5CZC0 6907 aa4.86□□□□□ -1.63
PRPF8-207ENST00000573681 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
PRPF8-207ENST00000573681 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
PRPF8-207ENST00000573681 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
PRPF8-207ENST00000573681 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms