RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 SPANXA2-OT1Q8N9U9 137 aa7.09□□□□□ -1.27
LINC01996-201ENST00000573270 Q5W150 140 aa7.05□□□□□ -1.28
LINC01996-201ENST00000573270 SERP1Q9Y6X1 66 aa7.02□□□□□ -1.29
LINC01996-201ENST00000573270 CYP4F30PQ9H0H9 118 aa7.01□□□□□ -1.29
LINC01996-201ENST00000573270 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
LINC01996-201ENST00000573270 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
LINC01996-201ENST00000573270 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
LINC01996-201ENST00000573270 SPINK7P58062 85 aa6.96□□□□□ -1.3
LINC01996-201ENST00000573270 C7orf65Q6ZTY9 151 aa6.96□□□□□ -1.3
LINC01996-201ENST00000573270 FAT4Q6V0I7 4981 aa6.95□□□□□ -1.3
LINC01996-201ENST00000573270 HRES1P13985 223 aa6.94□□□□□ -1.3
LINC01996-201ENST00000573270 ACYP2P14621 99 aa6.93□□□□□ -1.3
LINC01996-201ENST00000573270 KRTAP19-2Q3LHN2 52 aa6.9□□□□□ -1.3
LINC01996-201ENST00000573270 KRTAP4-11Q9BYQ6 195 aa6.9□□□□□ -1.3
LINC01996-201ENST00000573270 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
LINC01996-201ENST00000573270 A8MUN3 132 aa6.89□□□□□ -1.31
LINC01996-201ENST00000573270 MPLKIPQ8TAP9 179 aa6.87□□□□□ -1.31
LINC01996-201ENST00000573270 V9GYY9 64 aa6.86□□□□□ -1.31
LINC01996-201ENST00000573270 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
LINC01996-201ENST00000573270 RBM12B-AS1Q9P1G2 102 aa6.83□□□□□ -1.32
LINC01996-201ENST00000573270 CHKB-CPT1BH3BT56 60 aa6.8□□□□□ -1.32
LINC01996-201ENST00000573270 SPTSSBQ8NFR3 76 aa6.8□□□□□ -1.32
LINC01996-201ENST00000573270 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
LINC01996-201ENST00000573270 C4orf26Q17RF5 130 aa6.79□□□□□ -1.32
LINC01996-201ENST00000573270 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
LINC01996-201ENST00000573270 COA5Q86WW8 74 aa6.76□□□□□ -1.33
LINC01996-201ENST00000573270 MT1HP80294 61 aa6.73□□□□□ -1.33
LINC01996-201ENST00000573270 LCE4AQ5TA78 99 aa6.7□□□□□ -1.34
LINC01996-201ENST00000573270 Q1T7F1 81 aa6.69□□□□□ -1.34
LINC01996-201ENST00000573270 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
LINC01996-201ENST00000573270 H1FX-AS1Q4G0G2 97 aa6.66□□□□□ -1.34
LINC01996-201ENST00000573270 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
LINC01996-201ENST00000573270 KRTAP5-3Q6L8H2 238 aa6.64□□□□□ -1.35
LINC01996-201ENST00000573270 M0R2T5 61 aa6.63□□□□□ -1.35
LINC01996-201ENST00000573270 SEC61GP60059 68 aa6.62□□□□□ -1.35
LINC01996-201ENST00000573270 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
LINC01996-201ENST00000573270 S4R3F8 94 aa6.58□□□□□ -1.36
LINC01996-201ENST00000573270 LCA10Q71F78 164 aa6.54□□□□□ -1.36
LINC01996-201ENST00000573270 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
LINC01996-201ENST00000573270 LCE5AQ5TCM9 118 aa6.52□□□□□ -1.37
LINC01996-201ENST00000573270 A0A1B0GU69 56 aa6.51□□□□□ -1.37
LINC01996-201ENST00000573270 PSPHP1O15172 72 aa6.45□□□□□ -1.38
LINC01996-201ENST00000573270 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
LINC01996-201ENST00000573270 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
LINC01996-201ENST00000573270 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
LINC01996-201ENST00000573270 MT2AP02795 61 aa6.4□□□□□ -1.38
LINC01996-201ENST00000573270 A6NED7 52 aa6.38□□□□□ -1.39
LINC01996-201ENST00000573270 UQCR11O14957 56 aa6.37□□□□□ -1.39
LINC01996-201ENST00000573270 Q5VV11 94 aa6.37□□□□□ -1.39
LINC01996-201ENST00000573270 MT1FP04733 61 aa6.36□□□□□ -1.39
LINC01996-201ENST00000573270 BRK1Q8WUW1 75 aa6.31□□□□□ -1.4
LINC01996-201ENST00000573270 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
LINC01996-201ENST00000573270 A0A1B0GU33 70 aa6.28□□□□□ -1.4
LINC01996-201ENST00000573270 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
LINC01996-201ENST00000573270 H0YAA0 97 aa6.27□□□□□ -1.41
LINC01996-201ENST00000573270 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.41
LINC01996-201ENST00000573270 CDC42SE1Q9NRR8 79 aa6.27□□□□□ -1.41
LINC01996-201ENST00000573270 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
LINC01996-201ENST00000573270 ADM2Q7Z4H4 148 aa6.24□□□□□ -1.41
LINC01996-201ENST00000573270 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
LINC01996-201ENST00000573270 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
LINC01996-201ENST00000573270 K7ERS5 55 aa6.18□□□□□ -1.42
LINC01996-201ENST00000573270 USH2AO75445 5202 aa6.17□□□□□ -1.42
LINC01996-201ENST00000573270 M0QZ58 72 aa6.16□□□□□ -1.42
LINC01996-201ENST00000573270 P0C880 135 aa6.16□□□□□ -1.42
LINC01996-201ENST00000573270 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
LINC01996-201ENST00000573270 CRCT1Q9UGL9 99 aa6.09□□□□□ -1.43
LINC01996-201ENST00000573270 CRIPTQ9P021 101 aa6.08□□□□□ -1.44
LINC01996-201ENST00000573270 PMAIP1Q13794 54 aa6.05□□□□□ -1.44
LINC01996-201ENST00000573270 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
LINC01996-201ENST00000573270 R4GN34 69 aa6.03□□□□□ -1.44
LINC01996-201ENST00000573270 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
LINC01996-201ENST00000573270 KRTAP19-8Q3LI54 63 aa5.96□□□□□ -1.46
LINC01996-201ENST00000573270 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
LINC01996-201ENST00000573270 MT1BP07438 61 aa5.94□□□□□ -1.46
LINC01996-201ENST00000573270 LINC01554Q52M75 96 aa5.93□□□□□ -1.46
LINC01996-201ENST00000573270 A0A0D9SG42 100 aa5.89□□□□□ -1.47
LINC01996-201ENST00000573270 H3BS24 57 aa5.88□□□□□ -1.47
LINC01996-201ENST00000573270 A6NN06 94 aa5.87□□□□□ -1.47
LINC01996-201ENST00000573270 A8MU10 97 aa5.87□□□□□ -1.47
LINC01996-201ENST00000573270 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
LINC01996-201ENST00000573270 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
LINC01996-201ENST00000573270 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
LINC01996-201ENST00000573270 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
LINC01996-201ENST00000573270 KTN1-AS1Q86SY8 53 aa5.78□□□□□ -1.48
LINC01996-201ENST00000573270 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
LINC01996-201ENST00000573270 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
LINC01996-201ENST00000573270 ROMO1P60602 79 aa5.73□□□□□ -1.49
LINC01996-201ENST00000573270 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
LINC01996-201ENST00000573270 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
LINC01996-201ENST00000573270 KRTAP12-2P59991 146 aa5.68□□□□□ -1.5
LINC01996-201ENST00000573270 MT1XP80297 61 aa5.66□□□□□ -1.5
LINC01996-201ENST00000573270 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
LINC01996-201ENST00000573270 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
LINC01996-201ENST00000573270 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
LINC01996-201ENST00000573270 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
LINC01996-201ENST00000573270 TNP1P09430 55 aa5.45□□□□□ -1.54
LINC01996-201ENST00000573270 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
LINC01996-201ENST00000573270 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
LINC01996-201ENST00000573270 KMT2DO14686 5537 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms