RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 FAT4Q6V0I7 4981 aa4.77□□□□□ -1.65
NPLOC4-208ENST00000572351 TRAV7A0A075B6U4 112 aa4.77□□□□□ -1.65
NPLOC4-208ENST00000572351 C4orf26Q17RF5 130 aa4.76□□□□□ -1.65
NPLOC4-208ENST00000572351 H3BPC8 53 aa4.75□□□□□ -1.65
NPLOC4-208ENST00000572351 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
NPLOC4-208ENST00000572351 M0R2T5 61 aa4.73□□□□□ -1.65
NPLOC4-208ENST00000572351 MT1HP80294 61 aa4.72□□□□□ -1.65
NPLOC4-208ENST00000572351 SERP2Q8N6R1 65 aa4.72□□□□□ -1.65
NPLOC4-208ENST00000572351 H1FX-AS1Q4G0G2 97 aa4.7□□□□□ -1.66
NPLOC4-208ENST00000572351 KLKP1Q107X0 134 aa4.69□□□□□ -1.66
NPLOC4-208ENST00000572351 C20orf197Q8N268 126 aa4.67□□□□□ -1.66
NPLOC4-208ENST00000572351 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
NPLOC4-208ENST00000572351 SNURFQ9Y675 71 aa4.67□□□□□ -1.66
NPLOC4-208ENST00000572351 ANAPC13Q9BS18 74 aa4.66□□□□□ -1.66
NPLOC4-208ENST00000572351 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
NPLOC4-208ENST00000572351 COX7CP15954 63 aa4.65□□□□□ -1.67
NPLOC4-208ENST00000572351 A8MUN3 132 aa4.63□□□□□ -1.67
NPLOC4-208ENST00000572351 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
NPLOC4-208ENST00000572351 S4R3F8 94 aa4.62□□□□□ -1.67
NPLOC4-208ENST00000572351 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
NPLOC4-208ENST00000572351 KRTAP10-6P60371 365 aaPredicted RBP4.58□□□□□ -1.68
NPLOC4-208ENST00000572351 LCA10Q71F78 164 aa4.57□□□□□ -1.68
NPLOC4-208ENST00000572351 DMAC1Q96GE9 116 aa4.57□□□□□ -1.68
NPLOC4-208ENST00000572351 NDUFC1O43677 76 aa4.56□□□□□ -1.68
NPLOC4-208ENST00000572351 CSAG1Q6PB30 78 aa4.55□□□□□ -1.68
NPLOC4-208ENST00000572351 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
NPLOC4-208ENST00000572351 SPANXA2-OT1Q8N9U9 137 aa4.54□□□□□ -1.68
NPLOC4-208ENST00000572351 CCDC179H3BU77 68 aa4.53□□□□□ -1.68
NPLOC4-208ENST00000572351 ACYP2P14621 99 aa4.53□□□□□ -1.68
NPLOC4-208ENST00000572351 CHKB-CPT1BH3BT56 60 aa4.5□□□□□ -1.69
NPLOC4-208ENST00000572351 H7BZZ5 65 aa4.5□□□□□ -1.69
NPLOC4-208ENST00000572351 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
NPLOC4-208ENST00000572351 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
NPLOC4-208ENST00000572351 MT2AP02795 61 aa4.46□□□□□ -1.7
NPLOC4-208ENST00000572351 KRTAP10-10P60014 251 aa4.46□□□□□ -1.7
NPLOC4-208ENST00000572351 SPTSSBQ8NFR3 76 aa4.45□□□□□ -1.7
NPLOC4-208ENST00000572351 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
NPLOC4-208ENST00000572351 MT1FP04733 61 aa4.43□□□□□ -1.7
NPLOC4-208ENST00000572351 COA5Q86WW8 74 aa4.42□□□□□ -1.7
NPLOC4-208ENST00000572351 ATP5EP56381 51 aaPredicted RBP4.4□□□□□ -1.71
NPLOC4-208ENST00000572351 TMEM258P61165 79 aa4.39□□□□□ -1.71
NPLOC4-208ENST00000572351 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
NPLOC4-208ENST00000572351 ADM2Q7Z4H4 148 aa4.38□□□□□ -1.71
NPLOC4-208ENST00000572351 H0YAA0 97 aa4.37□□□□□ -1.71
NPLOC4-208ENST00000572351 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
NPLOC4-208ENST00000572351 PCP4P48539 62 aa4.35□□□□□ -1.71
NPLOC4-208ENST00000572351 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
NPLOC4-208ENST00000572351 CRIPTQ9P021 101 aa4.31□□□□□ -1.72
NPLOC4-208ENST00000572351 SEC61GP60059 68 aa4.29□□□□□ -1.72
NPLOC4-208ENST00000572351 P0C880 135 aa4.28□□□□□ -1.72
NPLOC4-208ENST00000572351 SERP1Q9Y6X1 66 aa4.26□□□□□ -1.73
NPLOC4-208ENST00000572351 R4GN34 69 aa4.26□□□□□ -1.73
NPLOC4-208ENST00000572351 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
NPLOC4-208ENST00000572351 M0QZ58 72 aa4.23□□□□□ -1.73
NPLOC4-208ENST00000572351 A0A1B0GU69 56 aa4.21□□□□□ -1.74
NPLOC4-208ENST00000572351 USH2AO75445 5202 aa4.2□□□□□ -1.74
NPLOC4-208ENST00000572351 Q5VV11 94 aa4.19□□□□□ -1.74
NPLOC4-208ENST00000572351 LINC01554Q52M75 96 aa4.18□□□□□ -1.74
NPLOC4-208ENST00000572351 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
NPLOC4-208ENST00000572351 CRCT1Q9UGL9 99 aa4.17□□□□□ -1.74
NPLOC4-208ENST00000572351 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
NPLOC4-208ENST00000572351 A0A1B0GU33 70 aa4.15□□□□□ -1.75
NPLOC4-208ENST00000572351 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.75
NPLOC4-208ENST00000572351 LINC01558Q9Y6Z2 57 aa4.14□□□□□ -1.75
NPLOC4-208ENST00000572351 MT1BP07438 61 aa4.12□□□□□ -1.75
NPLOC4-208ENST00000572351 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
NPLOC4-208ENST00000572351 V9GYY9 64 aa4.11□□□□□ -1.75
NPLOC4-208ENST00000572351 SMIM26A0A096LP01 95 aa4.1□□□□□ -1.75
NPLOC4-208ENST00000572351 SSPOA2VEC9 5147 aa4.09□□□□□ -1.75
NPLOC4-208ENST00000572351 RPS28P62857 69 aaKnown RBP4.09□□□□□ -1.75
NPLOC4-208ENST00000572351 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
NPLOC4-208ENST00000572351 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
NPLOC4-208ENST00000572351 A0A0D9SG42 100 aa4.07□□□□□ -1.76
NPLOC4-208ENST00000572351 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
NPLOC4-208ENST00000572351 Q1T7F1 81 aa4.06□□□□□ -1.76
NPLOC4-208ENST00000572351 PSPHP1O15172 72 aa4.04□□□□□ -1.76
NPLOC4-208ENST00000572351 A6NN06 94 aa4.03□□□□□ -1.76
NPLOC4-208ENST00000572351 UQCR11O14957 56 aa4.02□□□□□ -1.77
NPLOC4-208ENST00000572351 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
NPLOC4-208ENST00000572351 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
NPLOC4-208ENST00000572351 A8MU10 97 aa3.99□□□□□ -1.77
NPLOC4-208ENST00000572351 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
NPLOC4-208ENST00000572351 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
NPLOC4-208ENST00000572351 MIR22HGQ0VDD5 57 aa3.96□□□□□ -1.78
NPLOC4-208ENST00000572351 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
NPLOC4-208ENST00000572351 A6NED7 52 aa3.94□□□□□ -1.78
NPLOC4-208ENST00000572351 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
NPLOC4-208ENST00000572351 MT1XP80297 61 aa3.94□□□□□ -1.78
NPLOC4-208ENST00000572351 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
NPLOC4-208ENST00000572351 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
NPLOC4-208ENST00000572351 K7ERS5 55 aa3.88□□□□□ -1.79
NPLOC4-208ENST00000572351 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
NPLOC4-208ENST00000572351 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
NPLOC4-208ENST00000572351 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
NPLOC4-208ENST00000572351 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
NPLOC4-208ENST00000572351 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
NPLOC4-208ENST00000572351 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
NPLOC4-208ENST00000572351 TNP1P09430 55 aa3.72□□□□□ -1.81
NPLOC4-208ENST00000572351 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
NPLOC4-208ENST00000572351 BRK1Q8WUW1 75 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms