RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
LITAF-208ENST00000571627 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
LITAF-208ENST00000571627 LCA10Q71F78 164 aa6.77□□□□□ -1.33
LITAF-208ENST00000571627 H3BPC8 53 aa6.75□□□□□ -1.33
LITAF-208ENST00000571627 SMIM20Q8N5G0 67 aa6.75□□□□□ -1.33
LITAF-208ENST00000571627 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
LITAF-208ENST00000571627 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
LITAF-208ENST00000571627 A8MUN3 132 aa6.72□□□□□ -1.33
LITAF-208ENST00000571627 KLKP1Q107X0 134 aa6.71□□□□□ -1.34
LITAF-208ENST00000571627 KRTAP19-6Q3LI70 58 aa6.69□□□□□ -1.34
LITAF-208ENST00000571627 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
LITAF-208ENST00000571627 TRAV7A0A075B6U4 112 aa6.64□□□□□ -1.35
LITAF-208ENST00000571627 NDUFC1O43677 76 aa6.64□□□□□ -1.35
LITAF-208ENST00000571627 SERP2Q8N6R1 65 aa6.57□□□□□ -1.36
LITAF-208ENST00000571627 MACF1Q9UPN3 7388 aaKnown RBP6.57□□□□□ -1.36
LITAF-208ENST00000571627 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
LITAF-208ENST00000571627 H0YAA0 97 aa6.54□□□□□ -1.36
LITAF-208ENST00000571627 SPRR2GQ9BYE4 73 aa6.53□□□□□ -1.36
LITAF-208ENST00000571627 MT1BP07438 61 aa6.52□□□□□ -1.37
LITAF-208ENST00000571627 CRIPTQ9P021 101 aa6.51□□□□□ -1.37
LITAF-208ENST00000571627 Q5VV11 94 aa6.5□□□□□ -1.37
LITAF-208ENST00000571627 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
LITAF-208ENST00000571627 KRTAP19-8Q3LI54 63 aa6.49□□□□□ -1.37
LITAF-208ENST00000571627 COX7CP15954 63 aa6.48□□□□□ -1.37
LITAF-208ENST00000571627 SYNE2Q8WXH0 6885 aaKnown RBP6.47□□□□□ -1.37
LITAF-208ENST00000571627 ACYP2P14621 99 aa6.46□□□□□ -1.38
LITAF-208ENST00000571627 C20orf197Q8N268 126 aa6.46□□□□□ -1.38
LITAF-208ENST00000571627 ADM2Q7Z4H4 148 aa6.44□□□□□ -1.38
LITAF-208ENST00000571627 SNURFQ9Y675 71 aa6.43□□□□□ -1.38
LITAF-208ENST00000571627 A6NN06 94 aa6.41□□□□□ -1.38
LITAF-208ENST00000571627 SPTSSBQ8NFR3 76 aa6.38□□□□□ -1.39
LITAF-208ENST00000571627 SPANXA2-OT1Q8N9U9 137 aa6.37□□□□□ -1.39
LITAF-208ENST00000571627 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
LITAF-208ENST00000571627 CHKB-CPT1BH3BT56 60 aa6.34□□□□□ -1.39
LITAF-208ENST00000571627 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
LITAF-208ENST00000571627 P0C880 135 aa6.29□□□□□ -1.4
LITAF-208ENST00000571627 R4GN34 69 aa6.29□□□□□ -1.4
LITAF-208ENST00000571627 CCDC179H3BU77 68 aa6.25□□□□□ -1.41
LITAF-208ENST00000571627 H7BZZ5 65 aa6.23□□□□□ -1.41
LITAF-208ENST00000571627 M0QZ58 72 aa6.23□□□□□ -1.41
LITAF-208ENST00000571627 ATP5EP56381 51 aaPredicted RBP6.2□□□□□ -1.42
LITAF-208ENST00000571627 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
LITAF-208ENST00000571627 COA5Q86WW8 74 aa6.16□□□□□ -1.42
LITAF-208ENST00000571627 CYSTM1Q9H1C7 97 aa6.16□□□□□ -1.42
LITAF-208ENST00000571627 TMEM258P61165 79 aa6.14□□□□□ -1.43
LITAF-208ENST00000571627 MT1XP80297 61 aa6.13□□□□□ -1.43
LITAF-208ENST00000571627 MUC12Q9UKN1 5478 aa6.13□□□□□ -1.43
LITAF-208ENST00000571627 PCP4P48539 62 aa6.12□□□□□ -1.43
LITAF-208ENST00000571627 LINC01554Q52M75 96 aa6.12□□□□□ -1.43
LITAF-208ENST00000571627 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
LITAF-208ENST00000571627 NEBP20929 6669 aa6.09□□□□□ -1.43
LITAF-208ENST00000571627 KRTAP5-9P26371 169 aa6.06□□□□□ -1.44
LITAF-208ENST00000571627 KMT2DO14686 5537 aa6.06□□□□□ -1.44
LITAF-208ENST00000571627 SEC61GP60059 68 aa6.04□□□□□ -1.44
LITAF-208ENST00000571627 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
LITAF-208ENST00000571627 MDN1Q9NU22 5596 aa5.99□□□□□ -1.45
LITAF-208ENST00000571627 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
LITAF-208ENST00000571627 KRTAP12-2P59991 146 aa5.93□□□□□ -1.46
LITAF-208ENST00000571627 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
LITAF-208ENST00000571627 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.46
LITAF-208ENST00000571627 H3BS24 57 aa5.89□□□□□ -1.47
LITAF-208ENST00000571627 A0A1B0GU33 70 aa5.88□□□□□ -1.47
LITAF-208ENST00000571627 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
LITAF-208ENST00000571627 A0A1B0GU69 56 aa5.86□□□□□ -1.47
LITAF-208ENST00000571627 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
LITAF-208ENST00000571627 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
LITAF-208ENST00000571627 PRR15LQ9BU68 103 aa5.86□□□□□ -1.47
LITAF-208ENST00000571627 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
LITAF-208ENST00000571627 SPRR2EP22531 72 aa5.82□□□□□ -1.48
LITAF-208ENST00000571627 SPRR2BP35325 72 aa5.82□□□□□ -1.48
LITAF-208ENST00000571627 SPRR2AP35326 72 aa5.82□□□□□ -1.48
LITAF-208ENST00000571627 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
LITAF-208ENST00000571627 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
LITAF-208ENST00000571627 V9GYY9 64 aa5.81□□□□□ -1.48
LITAF-208ENST00000571627 A0A0D9SG42 100 aa5.8□□□□□ -1.48
LITAF-208ENST00000571627 RPS28P62857 69 aaKnown RBP5.8□□□□□ -1.48
LITAF-208ENST00000571627 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
LITAF-208ENST00000571627 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
LITAF-208ENST00000571627 SMIM26A0A096LP01 95 aa5.77□□□□□ -1.49
LITAF-208ENST00000571627 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
LITAF-208ENST00000571627 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
LITAF-208ENST00000571627 Q1T7F1 81 aa5.7□□□□□ -1.5
LITAF-208ENST00000571627 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
LITAF-208ENST00000571627 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
LITAF-208ENST00000571627 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
LITAF-208ENST00000571627 A8MU10 97 aa5.63□□□□□ -1.51
LITAF-208ENST00000571627 SPRR2DP22532 72 aa5.63□□□□□ -1.51
LITAF-208ENST00000571627 UQCR11O14957 56 aa5.62□□□□□ -1.51
LITAF-208ENST00000571627 PSPHP1O15172 72 aa5.59□□□□□ -1.51
LITAF-208ENST00000571627 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
LITAF-208ENST00000571627 MIR22HGQ0VDD5 57 aa5.51□□□□□ -1.53
LITAF-208ENST00000571627 KRTAP2-2Q9BYT5 123 aa5.51□□□□□ -1.53
LITAF-208ENST00000571627 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
LITAF-208ENST00000571627 A6NED7 52 aa5.49□□□□□ -1.53
LITAF-208ENST00000571627 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
LITAF-208ENST00000571627 LCE3BQ5TA77 95 aa5.46□□□□□ -1.54
LITAF-208ENST00000571627 K7ERS5 55 aa5.45□□□□□ -1.54
LITAF-208ENST00000571627 MT1EP04732 61 aa5.42□□□□□ -1.54
LITAF-208ENST00000571627 TNP1P09430 55 aa5.42□□□□□ -1.54
LITAF-208ENST00000571627 C10orf95Q9H7T3 257 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms