RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 PSPHP1O15172 72 aa9.82□□□□□ -0.84
RPAIN-210ENST00000571613 S4R3F8 94 aa9.77□□□□□ -0.85
RPAIN-210ENST00000571613 A0A1B0GU69 56 aa9.75□□□□□ -0.85
RPAIN-210ENST00000571613 Q5VV11 94 aa9.74□□□□□ -0.85
RPAIN-210ENST00000571613 HERC1Q15751 4861 aa9.74□□□□□ -0.85
RPAIN-210ENST00000571613 HMCN2Q8NDA2 5059 aa9.73□□□□□ -0.85
RPAIN-210ENST00000571613 SEC61GP60059 68 aa9.73□□□□□ -0.85
RPAIN-210ENST00000571613 LCA10Q71F78 164 aa9.71□□□□□ -0.86
RPAIN-210ENST00000571613 KRTAP4-1Q9BYQ7 146 aa9.71□□□□□ -0.86
RPAIN-210ENST00000571613 KRTAP3-3Q9BYR6 98 aa9.65□□□□□ -0.86
RPAIN-210ENST00000571613 A6NED7 52 aa9.58□□□□□ -0.88
RPAIN-210ENST00000571613 CSAG1Q6PB30 78 aa9.58□□□□□ -0.88
RPAIN-210ENST00000571613 BRK1Q8WUW1 75 aa9.53□□□□□ -0.88
RPAIN-210ENST00000571613 UQCR11O14957 56 aa9.5□□□□□ -0.89
RPAIN-210ENST00000571613 KRTAP19-2Q3LHN2 52 aa9.49□□□□□ -0.89
RPAIN-210ENST00000571613 CDC42SE1Q9NRR8 79 aa9.44□□□□□ -0.9
RPAIN-210ENST00000571613 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
RPAIN-210ENST00000571613 A0A1B0GU33 70 aa9.42□□□□□ -0.9
RPAIN-210ENST00000571613 PRO0628Q9UI54 55 aa9.42□□□□□ -0.9
RPAIN-210ENST00000571613 H0YAA0 97 aa9.4□□□□□ -0.9
RPAIN-210ENST00000571613 MIR22HGQ0VDD5 57 aa9.37□□□□□ -0.91
RPAIN-210ENST00000571613 SPATA8Q6RVD6 105 aa9.37□□□□□ -0.91
RPAIN-210ENST00000571613 KRTAP10-6P60371 365 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-210ENST00000571613 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
RPAIN-210ENST00000571613 MUC2Q02817 5179 aa9.31□□□□□ -0.92
RPAIN-210ENST00000571613 FLGP20930 4061 aaPredicted RBP9.28□□□□□ -0.92
RPAIN-210ENST00000571613 P0C880 135 aa9.24□□□□□ -0.93
RPAIN-210ENST00000571613 A8MU10 97 aa9.23□□□□□ -0.93
RPAIN-210ENST00000571613 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
RPAIN-210ENST00000571613 UBR4Q5T4S7 5183 aa9.2□□□□□ -0.94
RPAIN-210ENST00000571613 RNF213Q63HN8 5207 aa9.2□□□□□ -0.94
RPAIN-210ENST00000571613 M0QZ58 72 aa9.16□□□□□ -0.94
RPAIN-210ENST00000571613 MT1HP80294 61 aa9.07□□□□□ -0.96
RPAIN-210ENST00000571613 KRTAP13-4Q3LI77 160 aa9.07□□□□□ -0.96
RPAIN-210ENST00000571613 M0R2T5 61 aa9.06□□□□□ -0.96
RPAIN-210ENST00000571613 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
RPAIN-210ENST00000571613 R4GN34 69 aa9.04□□□□□ -0.96
RPAIN-210ENST00000571613 K7ERS5 55 aa9.02□□□□□ -0.97
RPAIN-210ENST00000571613 CRIPTQ9P021 101 aa8.98□□□□□ -0.97
RPAIN-210ENST00000571613 A0A0D9SG42 100 aa8.95□□□□□ -0.98
RPAIN-210ENST00000571613 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
RPAIN-210ENST00000571613 A6NN06 94 aa8.93□□□□□ -0.98
RPAIN-210ENST00000571613 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
RPAIN-210ENST00000571613 SVIPQ8NHG7 77 aa8.85□□□□□ -0.99
RPAIN-210ENST00000571613 LINC01554Q52M75 96 aa8.81□□□□□ -1
RPAIN-210ENST00000571613 KRTAP12-1P59990 96 aa8.78□□□□□ -1
RPAIN-210ENST00000571613 SPINT4Q6UDR6 99 aa8.77□□□□□ -1.01
RPAIN-210ENST00000571613 KRTAP9-8Q9BYQ0 159 aa8.75□□□□□ -1.01
RPAIN-210ENST00000571613 KRTAP12-2P59991 146 aa8.74□□□□□ -1.01
RPAIN-210ENST00000571613 MT2AP02795 61 aa8.73□□□□□ -1.01
RPAIN-210ENST00000571613 KRTAP10-10P60014 251 aa8.71□□□□□ -1.02
RPAIN-210ENST00000571613 KTN1-AS1Q86SY8 53 aa8.71□□□□□ -1.02
RPAIN-210ENST00000571613 SPRR2GQ9BYE4 73 aa8.68□□□□□ -1.02
RPAIN-210ENST00000571613 MT1FP04733 61 aa8.66□□□□□ -1.02
RPAIN-210ENST00000571613 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-210ENST00000571613 ROMO1P60602 79 aa8.59□□□□□ -1.03
RPAIN-210ENST00000571613 KRTAP19-1Q8IUB9 90 aa8.57□□□□□ -1.04
RPAIN-210ENST00000571613 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
RPAIN-210ENST00000571613 PLAC4Q8WY50 150 aa8.47□□□□□ -1.05
RPAIN-210ENST00000571613 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
RPAIN-210ENST00000571613 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
RPAIN-210ENST00000571613 PRAC1Q96KF2 57 aa8.35□□□□□ -1.07
RPAIN-210ENST00000571613 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
RPAIN-210ENST00000571613 MT1BP07438 61 aa8.24□□□□□ -1.09
RPAIN-210ENST00000571613 KRTAP25-1Q3LHN0 102 aa8.23□□□□□ -1.09
RPAIN-210ENST00000571613 LCE2BO14633 110 aa8.14□□□□□ -1.11
RPAIN-210ENST00000571613 TNP1P09430 55 aa8.11□□□□□ -1.11
RPAIN-210ENST00000571613 PRO2289Q9P1D8 64 aa8.05□□□□□ -1.12
RPAIN-210ENST00000571613 MT1XP80297 61 aa8□□□□□ -1.13
RPAIN-210ENST00000571613 KRTAP10-5P60370 271 aa7.99□□□□□ -1.13
RPAIN-210ENST00000571613 PP632Q6XCG6 107 aa7.99□□□□□ -1.13
RPAIN-210ENST00000571613 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
RPAIN-210ENST00000571613 USH2AO75445 5202 aa7.83□□□□□ -1.16
RPAIN-210ENST00000571613 KRTAP10-12P60413 245 aa7.69□□□□□ -1.18
RPAIN-210ENST00000571613 KRTAP19-6Q3LI70 58 aa7.69□□□□□ -1.18
RPAIN-210ENST00000571613 KRTAP10-7P60409 375 aaPredicted RBP7.67□□□□□ -1.18
RPAIN-210ENST00000571613 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
RPAIN-210ENST00000571613 LCE3AQ5TA76 89 aa7.64□□□□□ -1.19
RPAIN-210ENST00000571613 KRTAP8-1Q8IUC2 63 aa7.56□□□□□ -1.2
RPAIN-210ENST00000571613 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
RPAIN-210ENST00000571613 KRTAP9-6A0A140TA67 174 aa7.49□□□□□ -1.21
RPAIN-210ENST00000571613 KRTAP12-3P60328 96 aa7.38□□□□□ -1.23
RPAIN-210ENST00000571613 FSIP2Q5CZC0 6907 aa7.34□□□□□ -1.23
RPAIN-210ENST00000571613 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
RPAIN-210ENST00000571613 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
RPAIN-210ENST00000571613 KRTAP15-1Q3LI76 137 aa7.28□□□□□ -1.24
RPAIN-210ENST00000571613 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
RPAIN-210ENST00000571613 FCGBPQ9Y6R7 5405 aaPredicted RBP7.22□□□□□ -1.25
RPAIN-210ENST00000571613 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
RPAIN-210ENST00000571613 KMT2DO14686 5537 aa7.18□□□□□ -1.26
RPAIN-210ENST00000571613 KRTAP19-7Q3SYF9 63 aa7.13□□□□□ -1.27
RPAIN-210ENST00000571613 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
RPAIN-210ENST00000571613 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
RPAIN-210ENST00000571613 MT1EP04732 61 aa7.03□□□□□ -1.28
RPAIN-210ENST00000571613 LUZP6Q538Z0 58 aa6.95□□□□□ -1.3
RPAIN-210ENST00000571613 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.3
RPAIN-210ENST00000571613 MT1LQ93083 61 aa6.9□□□□□ -1.31
RPAIN-210ENST00000571613 LOC100996750A0A140TA64 210 aa6.87□□□□□ -1.31
RPAIN-210ENST00000571613 KRTAP4-6Q9BYQ5 205 aa6.87□□□□□ -1.31
RPAIN-210ENST00000571613 SPRR2FQ96RM1 72 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms