RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
CTDNEP1-205ENST00000570828 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
CTDNEP1-205ENST00000570828 MMP24-AS1A0A0U1RRL7 71 aa6.03□□□□□ -1.44
CTDNEP1-205ENST00000570828 MRPL34Q9BQ48 92 aaKnown RBP6.03□□□□□ -1.44
CTDNEP1-205ENST00000570828 hDV103S1A0JD37 113 aa6.01□□□□□ -1.45
CTDNEP1-205ENST00000570828 K7EQZ3 153 aa6.01□□□□□ -1.45
CTDNEP1-205ENST00000570828 NDUFS5O43920 106 aa6.01□□□□□ -1.45
CTDNEP1-205ENST00000570828 KRTAP5-11Q6L8G4 156 aa6.01□□□□□ -1.45
CTDNEP1-205ENST00000570828 SMIM20Q8N5G0 67 aa6.01□□□□□ -1.45
CTDNEP1-205ENST00000570828 CCDC179H3BU77 68 aa6□□□□□ -1.45
CTDNEP1-205ENST00000570828 RPS28P62857 69 aaKnown RBP6□□□□□ -1.45
CTDNEP1-205ENST00000570828 ATP5EP2Q5VTU8 51 aa5.99□□□□□ -1.45
CTDNEP1-205ENST00000570828 FAM236AA0A1B0GUQ0 79 aa5.98□□□□□ -1.45
CTDNEP1-205ENST00000570828 FAM236BA0A1B0GV22 79 aa5.98□□□□□ -1.45
CTDNEP1-205ENST00000570828 BPY2O14599 106 aa5.98□□□□□ -1.45
CTDNEP1-205ENST00000570828 COX7CP15954 63 aa5.97□□□□□ -1.45
CTDNEP1-205ENST00000570828 LCE1AQ5T7P2 110 aa5.96□□□□□ -1.46
CTDNEP1-205ENST00000570828 TMEM258P61165 79 aa5.95□□□□□ -1.46
CTDNEP1-205ENST00000570828 PSPHP1O15172 72 aa5.94□□□□□ -1.46
CTDNEP1-205ENST00000570828 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
CTDNEP1-205ENST00000570828 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
CTDNEP1-205ENST00000570828 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
CTDNEP1-205ENST00000570828 H1FX-AS1Q4G0G2 97 aa5.92□□□□□ -1.46
CTDNEP1-205ENST00000570828 C7orf65Q6ZTY9 151 aa5.92□□□□□ -1.46
CTDNEP1-205ENST00000570828 SERP2Q8N6R1 65 aa5.92□□□□□ -1.46
CTDNEP1-205ENST00000570828 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
CTDNEP1-205ENST00000570828 CASC2Q6XLA1 102 aa5.91□□□□□ -1.46
CTDNEP1-205ENST00000570828 Q8N9L7 120 aa5.91□□□□□ -1.46
CTDNEP1-205ENST00000570828 HIST1H4AP62805 103 aaKnown RBP5.89□□□□□ -1.47
CTDNEP1-205ENST00000570828 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
CTDNEP1-205ENST00000570828 HCG22E2RYF7 251 aa5.88□□□□□ -1.47
CTDNEP1-205ENST00000570828 Q5W150 140 aa5.88□□□□□ -1.47
CTDNEP1-205ENST00000570828 UBL5Q9BZL1 73 aa5.88□□□□□ -1.47
CTDNEP1-205ENST00000570828 CXCL6P80162 114 aa5.85□□□□□ -1.47
CTDNEP1-205ENST00000570828 LINC00846Q9NV44 126 aa5.85□□□□□ -1.47
CTDNEP1-205ENST00000570828 NDUFC1O43677 76 aa5.82□□□□□ -1.48
CTDNEP1-205ENST00000570828 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
CTDNEP1-205ENST00000570828 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
CTDNEP1-205ENST00000570828 KRTAP19-6Q3LI70 58 aa5.79□□□□□ -1.48
CTDNEP1-205ENST00000570828 TRAV7A0A075B6U4 112 aa5.78□□□□□ -1.48
CTDNEP1-205ENST00000570828 SERP1Q9Y6X1 66 aa5.76□□□□□ -1.49
CTDNEP1-205ENST00000570828 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
CTDNEP1-205ENST00000570828 MP68P56378 58 aa5.75□□□□□ -1.49
CTDNEP1-205ENST00000570828 TP53AIP1Q9HCN2 124 aa5.72□□□□□ -1.49
CTDNEP1-205ENST00000570828 S4R3F8 94 aa5.72□□□□□ -1.49
CTDNEP1-205ENST00000570828 KLKP1Q107X0 134 aa5.7□□□□□ -1.5
CTDNEP1-205ENST00000570828 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
CTDNEP1-205ENST00000570828 C20orf197Q8N268 126 aa5.68□□□□□ -1.5
CTDNEP1-205ENST00000570828 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
CTDNEP1-205ENST00000570828 A0A087WVE0 104 aa5.66□□□□□ -1.5
CTDNEP1-205ENST00000570828 KRTAP2-2Q9BYT5 123 aa5.66□□□□□ -1.5
CTDNEP1-205ENST00000570828 LCE1EQ5T753 118 aa5.65□□□□□ -1.5
CTDNEP1-205ENST00000570828 LCA10Q71F78 164 aa5.65□□□□□ -1.5
CTDNEP1-205ENST00000570828 H7BZZ5 65 aa5.61□□□□□ -1.51
CTDNEP1-205ENST00000570828 TRAV22A0A0B4J277 110 aa5.6□□□□□ -1.51
CTDNEP1-205ENST00000570828 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
CTDNEP1-205ENST00000570828 CYP4F30PQ9H0H9 118 aa5.6□□□□□ -1.51
CTDNEP1-205ENST00000570828 LOC101927531A0A1B0GV80 90 aa5.58□□□□□ -1.52
CTDNEP1-205ENST00000570828 Q5VV11 94 aa5.58□□□□□ -1.52
CTDNEP1-205ENST00000570828 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
CTDNEP1-205ENST00000570828 KRTAP6-3Q3LI67 103 aa5.55□□□□□ -1.52
CTDNEP1-205ENST00000570828 CYSTM1Q9H1C7 97 aa5.55□□□□□ -1.52
CTDNEP1-205ENST00000570828 A6NN06 94 aa5.54□□□□□ -1.52
CTDNEP1-205ENST00000570828 MT1BP07438 61 aa5.54□□□□□ -1.52
CTDNEP1-205ENST00000570828 A8MUN3 132 aa5.53□□□□□ -1.52
CTDNEP1-205ENST00000570828 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
CTDNEP1-205ENST00000570828 SNURFQ9Y675 71 aa5.51□□□□□ -1.53
CTDNEP1-205ENST00000570828 H0Y9P7 68 aa5.5□□□□□ -1.53
CTDNEP1-205ENST00000570828 CRIPTQ9P021 101 aa5.48□□□□□ -1.53
CTDNEP1-205ENST00000570828 H3BPC8 53 aa5.47□□□□□ -1.53
CTDNEP1-205ENST00000570828 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
CTDNEP1-205ENST00000570828 NEBP20929 6669 aa5.44□□□□□ -1.54
CTDNEP1-205ENST00000570828 KRTAP10-5P60370 271 aa5.44□□□□□ -1.54
CTDNEP1-205ENST00000570828 Q1T7F1 81 aa5.42□□□□□ -1.54
CTDNEP1-205ENST00000570828 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
CTDNEP1-205ENST00000570828 H0YAA0 97 aa5.4□□□□□ -1.54
CTDNEP1-205ENST00000570828 LUZP6Q538Z0 58 aa5.4□□□□□ -1.54
CTDNEP1-205ENST00000570828 LINC00208Q96KT6 92 aa5.39□□□□□ -1.55
CTDNEP1-205ENST00000570828 SPANXA2-OT1Q8N9U9 137 aa5.38□□□□□ -1.55
CTDNEP1-205ENST00000570828 KRTAP5-1Q6L8H4 278 aa5.36□□□□□ -1.55
CTDNEP1-205ENST00000570828 NDUFAF8A1L188 74 aa5.35□□□□□ -1.55
CTDNEP1-205ENST00000570828 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
CTDNEP1-205ENST00000570828 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.55
CTDNEP1-205ENST00000570828 K7ERS5 55 aa5.29□□□□□ -1.56
CTDNEP1-205ENST00000570828 KRTAP5-9P26371 169 aa5.27□□□□□ -1.57
CTDNEP1-205ENST00000570828 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
CTDNEP1-205ENST00000570828 KMT2DO14686 5537 aa5.25□□□□□ -1.57
CTDNEP1-205ENST00000570828 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
CTDNEP1-205ENST00000570828 R4GN34 69 aa5.24□□□□□ -1.57
CTDNEP1-205ENST00000570828 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
CTDNEP1-205ENST00000570828 LINC01554Q52M75 96 aa5.23□□□□□ -1.57
CTDNEP1-205ENST00000570828 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
CTDNEP1-205ENST00000570828 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
CTDNEP1-205ENST00000570828 CHKB-CPT1BH3BT56 60 aa5.21□□□□□ -1.58
CTDNEP1-205ENST00000570828 P0C880 135 aa5.21□□□□□ -1.58
CTDNEP1-205ENST00000570828 MT1XP80297 61 aa5.2□□□□□ -1.58
CTDNEP1-205ENST00000570828 M0QZ58 72 aa5.19□□□□□ -1.58
CTDNEP1-205ENST00000570828 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
CTDNEP1-205ENST00000570828 A6NED7 52 aa5.17□□□□□ -1.58
CTDNEP1-205ENST00000570828 PRR15LQ9BU68 103 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms