RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SPINK7P58062 85 aa3.44□□□□□ -1.86
CTDNEP1-204ENST00000570484 C1orf64Q8NEQ6 169 aa3.44□□□□□ -1.86
CTDNEP1-204ENST00000570484 LINC00208Q96KT6 92 aa3.44□□□□□ -1.86
CTDNEP1-204ENST00000570484 LRP2P98164 4655 aa3.43□□□□□ -1.86
CTDNEP1-204ENST00000570484 A0A0U1RQV1 116 aa3.42□□□□□ -1.86
CTDNEP1-204ENST00000570484 FAM236DA0A1B0GTK5 79 aa3.42□□□□□ -1.86
CTDNEP1-204ENST00000570484 FAM236CP0DP71 79 aa3.42□□□□□ -1.86
CTDNEP1-204ENST00000570484 RBM12B-AS1Q9P1G2 102 aa3.42□□□□□ -1.86
CTDNEP1-204ENST00000570484 COX7CP15954 63 aa3.41□□□□□ -1.86
CTDNEP1-204ENST00000570484 COX6B2Q6YFQ2 88 aa3.41□□□□□ -1.86
CTDNEP1-204ENST00000570484 C20orf197Q8N268 126 aa3.41□□□□□ -1.86
CTDNEP1-204ENST00000570484 CYP4F30PQ9H0H9 118 aa3.4□□□□□ -1.87
CTDNEP1-204ENST00000570484 UBR4Q5T4S7 5183 aa3.39□□□□□ -1.87
CTDNEP1-204ENST00000570484 SNURFQ9Y675 71 aa3.39□□□□□ -1.87
CTDNEP1-204ENST00000570484 HRES1P13985 223 aa3.38□□□□□ -1.87
CTDNEP1-204ENST00000570484 KRTAP4-1Q9BYQ7 146 aa3.38□□□□□ -1.87
CTDNEP1-204ENST00000570484 KLKP1Q107X0 134 aa3.37□□□□□ -1.87
CTDNEP1-204ENST00000570484 C4orf26Q17RF5 130 aa3.37□□□□□ -1.87
CTDNEP1-204ENST00000570484 MUC17Q685J3 4493 aa3.36□□□□□ -1.87
CTDNEP1-204ENST00000570484 NDUFC1O43677 76 aa3.35□□□□□ -1.87
CTDNEP1-204ENST00000570484 A8MUN3 132 aa3.33□□□□□ -1.88
CTDNEP1-204ENST00000570484 CCDC179H3BU77 68 aa3.33□□□□□ -1.88
CTDNEP1-204ENST00000570484 H1FX-AS1Q4G0G2 97 aa3.31□□□□□ -1.88
CTDNEP1-204ENST00000570484 SPANXA2-OT1Q8N9U9 137 aa3.3□□□□□ -1.88
CTDNEP1-204ENST00000570484 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
CTDNEP1-204ENST00000570484 S4R3F8 94 aa3.29□□□□□ -1.88
CTDNEP1-204ENST00000570484 H7BZZ5 65 aa3.28□□□□□ -1.88
CTDNEP1-204ENST00000570484 M0R2T5 61 aa3.28□□□□□ -1.88
CTDNEP1-204ENST00000570484 ATP5EP56381 51 aaPredicted RBP3.28□□□□□ -1.88
CTDNEP1-204ENST00000570484 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
CTDNEP1-204ENST00000570484 CHKB-CPT1BH3BT56 60 aa3.27□□□□□ -1.89
CTDNEP1-204ENST00000570484 ACYP2P14621 99 aa3.27□□□□□ -1.89
CTDNEP1-204ENST00000570484 CYSTM1Q9H1C7 97 aa3.27□□□□□ -1.89
CTDNEP1-204ENST00000570484 MUC2Q02817 5179 aa3.27□□□□□ -1.89
CTDNEP1-204ENST00000570484 TMEM258P61165 79 aa3.26□□□□□ -1.89
CTDNEP1-204ENST00000570484 KRTAP19-2Q3LHN2 52 aa3.26□□□□□ -1.89
CTDNEP1-204ENST00000570484 MT1HP80294 61 aa3.24□□□□□ -1.89
CTDNEP1-204ENST00000570484 SPTSSBQ8NFR3 76 aa3.24□□□□□ -1.89
CTDNEP1-204ENST00000570484 LCA10Q71F78 164 aa3.23□□□□□ -1.89
CTDNEP1-204ENST00000570484 COA5Q86WW8 74 aa3.22□□□□□ -1.89
CTDNEP1-204ENST00000570484 CSAG1Q6PB30 78 aa3.21□□□□□ -1.9
CTDNEP1-204ENST00000570484 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
CTDNEP1-204ENST00000570484 FAT4Q6V0I7 4981 aa3.16□□□□□ -1.9
CTDNEP1-204ENST00000570484 SERP1Q9Y6X1 66 aa3.15□□□□□ -1.91
CTDNEP1-204ENST00000570484 KRTAP10-6P60371 365 aaPredicted RBP3.14□□□□□ -1.91
CTDNEP1-204ENST00000570484 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
CTDNEP1-204ENST00000570484 SEC61GP60059 68 aa3.12□□□□□ -1.91
CTDNEP1-204ENST00000570484 MT3P25713 68 aa3.11□□□□□ -1.91
CTDNEP1-204ENST00000570484 H0YAA0 97 aa3.1□□□□□ -1.91
CTDNEP1-204ENST00000570484 ADM2Q7Z4H4 148 aa3.1□□□□□ -1.91
CTDNEP1-204ENST00000570484 KRTAP10-10P60014 251 aa3.09□□□□□ -1.91
CTDNEP1-204ENST00000570484 FLGP20930 4061 aaPredicted RBP3.08□□□□□ -1.92
CTDNEP1-204ENST00000570484 PRR15LQ9BU68 103 aa3.08□□□□□ -1.92
CTDNEP1-204ENST00000570484 A0A1B0GU69 56 aa3.07□□□□□ -1.92
CTDNEP1-204ENST00000570484 MT2AP02795 61 aa3.07□□□□□ -1.92
CTDNEP1-204ENST00000570484 MT1FP04733 61 aa3.05□□□□□ -1.92
CTDNEP1-204ENST00000570484 V9GYY9 64 aa3.05□□□□□ -1.92
CTDNEP1-204ENST00000570484 SMIM26A0A096LP01 95 aa3.04□□□□□ -1.92
CTDNEP1-204ENST00000570484 RPS28P62857 69 aaKnown RBP3.04□□□□□ -1.92
CTDNEP1-204ENST00000570484 CRIPTQ9P021 101 aa3.04□□□□□ -1.92
CTDNEP1-204ENST00000570484 R4GN34 69 aa3.03□□□□□ -1.92
CTDNEP1-204ENST00000570484 P0C880 135 aa3.02□□□□□ -1.93
CTDNEP1-204ENST00000570484 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
CTDNEP1-204ENST00000570484 M0QZ58 72 aa3.01□□□□□ -1.93
CTDNEP1-204ENST00000570484 Q1T7F1 81 aa2.99□□□□□ -1.93
CTDNEP1-204ENST00000570484 A0A1B0GU33 70 aa2.98□□□□□ -1.93
CTDNEP1-204ENST00000570484 PSPHP1O15172 72 aa2.97□□□□□ -1.93
CTDNEP1-204ENST00000570484 LINC01554Q52M75 96 aa2.97□□□□□ -1.93
CTDNEP1-204ENST00000570484 UQCR11O14957 56 aa2.95□□□□□ -1.94
CTDNEP1-204ENST00000570484 Q5VV11 94 aa2.95□□□□□ -1.94
CTDNEP1-204ENST00000570484 SPRR2GQ9BYE4 73 aa2.95□□□□□ -1.94
CTDNEP1-204ENST00000570484 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
CTDNEP1-204ENST00000570484 A0A0D9SG42 100 aa2.92□□□□□ -1.94
CTDNEP1-204ENST00000570484 A6NED7 52 aa2.92□□□□□ -1.94
CTDNEP1-204ENST00000570484 SPATA8Q6RVD6 105 aa2.92□□□□□ -1.94
CTDNEP1-204ENST00000570484 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
CTDNEP1-204ENST00000570484 MIR22HGQ0VDD5 57 aa2.9□□□□□ -1.95
CTDNEP1-204ENST00000570484 KRTAP13-4Q3LI77 160 aa2.9□□□□□ -1.95
CTDNEP1-204ENST00000570484 PLAC4Q8WY50 150 aa2.9□□□□□ -1.95
CTDNEP1-204ENST00000570484 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
CTDNEP1-204ENST00000570484 A6NN06 94 aa2.88□□□□□ -1.95
CTDNEP1-204ENST00000570484 KRTAP19-8Q3LI54 63 aa2.88□□□□□ -1.95
CTDNEP1-204ENST00000570484 A8MU10 97 aa2.86□□□□□ -1.95
CTDNEP1-204ENST00000570484 K7ERS5 55 aa2.86□□□□□ -1.95
CTDNEP1-204ENST00000570484 SPINT4Q6UDR6 99 aa2.86□□□□□ -1.95
CTDNEP1-204ENST00000570484 MT1BP07438 61 aa2.85□□□□□ -1.95
CTDNEP1-204ENST00000570484 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
CTDNEP1-204ENST00000570484 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
CTDNEP1-204ENST00000570484 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
CTDNEP1-204ENST00000570484 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
CTDNEP1-204ENST00000570484 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
CTDNEP1-204ENST00000570484 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
CTDNEP1-204ENST00000570484 KRTAP12-1P59990 96 aa2.81□□□□□ -1.96
CTDNEP1-204ENST00000570484 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
CTDNEP1-204ENST00000570484 BRK1Q8WUW1 75 aa2.79□□□□□ -1.96
CTDNEP1-204ENST00000570484 CRCT1Q9UGL9 99 aa2.79□□□□□ -1.96
CTDNEP1-204ENST00000570484 KRTAP19-6Q3LI70 58 aa2.77□□□□□ -1.97
CTDNEP1-204ENST00000570484 USH2AO75445 5202 aa2.76□□□□□ -1.97
CTDNEP1-204ENST00000570484 FSIP2Q5CZC0 6907 aa2.75□□□□□ -1.97
CTDNEP1-204ENST00000570484 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms