RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-219ENST00000570273 MT1HP80294 61 aa7.54□□□□□ -1.2
HERPUD1-219ENST00000570273 LCA10Q71F78 164 aa7.53□□□□□ -1.2
HERPUD1-219ENST00000570273 CHKB-CPT1BH3BT56 60 aa7.52□□□□□ -1.2
HERPUD1-219ENST00000570273 COA5Q86WW8 74 aa7.52□□□□□ -1.21
HERPUD1-219ENST00000570273 M0R2T5 61 aa7.5□□□□□ -1.21
HERPUD1-219ENST00000570273 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
HERPUD1-219ENST00000570273 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
HERPUD1-219ENST00000570273 SPTSSBQ8NFR3 76 aa7.42□□□□□ -1.22
HERPUD1-219ENST00000570273 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
HERPUD1-219ENST00000570273 KRTAP10-6P60371 365 aaPredicted RBP7.32□□□□□ -1.24
HERPUD1-219ENST00000570273 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-219ENST00000570273 H0YAA0 97 aa7.23□□□□□ -1.25
HERPUD1-219ENST00000570273 KRTAP9-2Q9BYQ4 174 aa7.22□□□□□ -1.25
HERPUD1-219ENST00000570273 RPS28P62857 69 aaKnown RBP7.21□□□□□ -1.25
HERPUD1-219ENST00000570273 ADM2Q7Z4H4 148 aa7.21□□□□□ -1.25
HERPUD1-219ENST00000570273 KRTAP9-8Q9BYQ0 159 aa7.21□□□□□ -1.25
HERPUD1-219ENST00000570273 MT2AP02795 61 aa7.2□□□□□ -1.26
HERPUD1-219ENST00000570273 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
HERPUD1-219ENST00000570273 SEC61GP60059 68 aa7.16□□□□□ -1.26
HERPUD1-219ENST00000570273 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.27
HERPUD1-219ENST00000570273 MT1FP04733 61 aa7.15□□□□□ -1.27
HERPUD1-219ENST00000570273 KRTAP10-10P60014 251 aa7.14□□□□□ -1.27
HERPUD1-219ENST00000570273 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
HERPUD1-219ENST00000570273 P0C880 135 aa7.12□□□□□ -1.27
HERPUD1-219ENST00000570273 LINC01558Q9Y6Z2 57 aa7.12□□□□□ -1.27
HERPUD1-219ENST00000570273 A0A1B0GU69 56 aa7.11□□□□□ -1.27
HERPUD1-219ENST00000570273 V9GYY9 64 aa7.08□□□□□ -1.28
HERPUD1-219ENST00000570273 PRR15LQ9BU68 103 aa7.07□□□□□ -1.28
HERPUD1-219ENST00000570273 Q1T7F1 81 aa7.06□□□□□ -1.28
HERPUD1-219ENST00000570273 CRIPTQ9P021 101 aa7.01□□□□□ -1.29
HERPUD1-219ENST00000570273 PSPHP1O15172 72 aa6.98□□□□□ -1.29
HERPUD1-219ENST00000570273 R4GN34 69 aa6.98□□□□□ -1.29
HERPUD1-219ENST00000570273 M0QZ58 72 aa6.97□□□□□ -1.29
HERPUD1-219ENST00000570273 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
HERPUD1-219ENST00000570273 A0A1B0GU33 70 aa6.96□□□□□ -1.3
HERPUD1-219ENST00000570273 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
HERPUD1-219ENST00000570273 SPRR2GQ9BYE4 73 aa6.91□□□□□ -1.3
HERPUD1-219ENST00000570273 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.31
HERPUD1-219ENST00000570273 Q5VV11 94 aa6.9□□□□□ -1.31
HERPUD1-219ENST00000570273 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
HERPUD1-219ENST00000570273 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
HERPUD1-219ENST00000570273 SPATA8Q6RVD6 105 aa6.86□□□□□ -1.31
HERPUD1-219ENST00000570273 LINC01554Q52M75 96 aa6.85□□□□□ -1.31
HERPUD1-219ENST00000570273 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
HERPUD1-219ENST00000570273 UQCR11O14957 56 aa6.84□□□□□ -1.32
HERPUD1-219ENST00000570273 LCE2BO14633 110 aa6.81□□□□□ -1.32
HERPUD1-219ENST00000570273 USH2AO75445 5202 aa6.79□□□□□ -1.32
HERPUD1-219ENST00000570273 A0A0D9SG42 100 aa6.78□□□□□ -1.32
HERPUD1-219ENST00000570273 A6NED7 52 aa6.77□□□□□ -1.33
HERPUD1-219ENST00000570273 KRTAP19-8Q3LI54 63 aa6.77□□□□□ -1.33
HERPUD1-219ENST00000570273 MIR22HGQ0VDD5 57 aa6.75□□□□□ -1.33
HERPUD1-219ENST00000570273 A8MU10 97 aa6.74□□□□□ -1.33
HERPUD1-219ENST00000570273 MT1BP07438 61 aa6.7□□□□□ -1.34
HERPUD1-219ENST00000570273 SSPOA2VEC9 5147 aa6.68□□□□□ -1.34
HERPUD1-219ENST00000570273 A6NN06 94 aa6.68□□□□□ -1.34
HERPUD1-219ENST00000570273 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
HERPUD1-219ENST00000570273 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
HERPUD1-219ENST00000570273 KRTAP12-1P59990 96 aa6.61□□□□□ -1.35
HERPUD1-219ENST00000570273 CDC42SE1Q9NRR8 79 aa6.6□□□□□ -1.35
HERPUD1-219ENST00000570273 KRTAP12-2P59991 146 aa6.59□□□□□ -1.36
HERPUD1-219ENST00000570273 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
HERPUD1-219ENST00000570273 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
HERPUD1-219ENST00000570273 K7ERS5 55 aa6.51□□□□□ -1.37
HERPUD1-219ENST00000570273 BRK1Q8WUW1 75 aa6.51□□□□□ -1.37
HERPUD1-219ENST00000570273 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-219ENST00000570273 MT1XP80297 61 aa6.43□□□□□ -1.38
HERPUD1-219ENST00000570273 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
HERPUD1-219ENST00000570273 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
HERPUD1-219ENST00000570273 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-219ENST00000570273 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
HERPUD1-219ENST00000570273 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-219ENST00000570273 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
HERPUD1-219ENST00000570273 PRO0628Q9UI54 55 aa6.21□□□□□ -1.42
HERPUD1-219ENST00000570273 ROMO1P60602 79 aa6.18□□□□□ -1.42
HERPUD1-219ENST00000570273 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
HERPUD1-219ENST00000570273 TNP1P09430 55 aa6.15□□□□□ -1.43
HERPUD1-219ENST00000570273 PMAIP1Q13794 54 aa6.13□□□□□ -1.43
HERPUD1-219ENST00000570273 KRTAP10-12P60413 245 aa6.09□□□□□ -1.43
HERPUD1-219ENST00000570273 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
HERPUD1-219ENST00000570273 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-219ENST00000570273 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
HERPUD1-219ENST00000570273 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
HERPUD1-219ENST00000570273 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
HERPUD1-219ENST00000570273 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
HERPUD1-219ENST00000570273 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
HERPUD1-219ENST00000570273 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
HERPUD1-219ENST00000570273 KMT2DO14686 5537 aa5.89□□□□□ -1.47
HERPUD1-219ENST00000570273 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
HERPUD1-219ENST00000570273 PP632Q6XCG6 107 aa5.82□□□□□ -1.48
HERPUD1-219ENST00000570273 KTN1-AS1Q86SY8 53 aa5.81□□□□□ -1.48
HERPUD1-219ENST00000570273 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
HERPUD1-219ENST00000570273 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
HERPUD1-219ENST00000570273 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
HERPUD1-219ENST00000570273 SPRR2FQ96RM1 72 aa5.74□□□□□ -1.49
HERPUD1-219ENST00000570273 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
HERPUD1-219ENST00000570273 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
HERPUD1-219ENST00000570273 MDN1Q9NU22 5596 aa5.68□□□□□ -1.5
HERPUD1-219ENST00000570273 MT1EP04732 61 aa5.67□□□□□ -1.5
HERPUD1-219ENST00000570273 NEBP20929 6669 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms