RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 TMEM258P61165 79 aa5.99□□□□□ -1.45
NUP93-220ENST00000569842 LCA10Q71F78 164 aa5.98□□□□□ -1.45
NUP93-220ENST00000569842 ACYP2P14621 99 aa5.96□□□□□ -1.46
NUP93-220ENST00000569842 RPS28P62857 69 aaKnown RBP5.95□□□□□ -1.46
NUP93-220ENST00000569842 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
NUP93-220ENST00000569842 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
NUP93-220ENST00000569842 CSAG1Q6PB30 78 aa5.91□□□□□ -1.46
NUP93-220ENST00000569842 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.47
NUP93-220ENST00000569842 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
NUP93-220ENST00000569842 COA5Q86WW8 74 aa5.84□□□□□ -1.47
NUP93-220ENST00000569842 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
NUP93-220ENST00000569842 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.48
NUP93-220ENST00000569842 SERP1Q9Y6X1 66 aa5.83□□□□□ -1.48
NUP93-220ENST00000569842 MT2AP02795 61 aa5.8□□□□□ -1.48
NUP93-220ENST00000569842 SPTSSBQ8NFR3 76 aa5.8□□□□□ -1.48
NUP93-220ENST00000569842 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
NUP93-220ENST00000569842 MT1FP04733 61 aa5.76□□□□□ -1.49
NUP93-220ENST00000569842 BRK1Q8WUW1 75 aa5.76□□□□□ -1.49
NUP93-220ENST00000569842 KRTAP10-10P60014 251 aa5.75□□□□□ -1.49
NUP93-220ENST00000569842 H0YAA0 97 aa5.72□□□□□ -1.49
NUP93-220ENST00000569842 ADM2Q7Z4H4 148 aa5.71□□□□□ -1.49
NUP93-220ENST00000569842 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
NUP93-220ENST00000569842 PSPHP1O15172 72 aa5.66□□□□□ -1.5
NUP93-220ENST00000569842 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
NUP93-220ENST00000569842 P0C880 135 aa5.64□□□□□ -1.51
NUP93-220ENST00000569842 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
NUP93-220ENST00000569842 LCE2DQ5TA82 110 aaPredicted RBP5.6□□□□□ -1.51
NUP93-220ENST00000569842 A8MU10 97 aa5.59□□□□□ -1.51
NUP93-220ENST00000569842 SEC61GP60059 68 aa5.58□□□□□ -1.52
NUP93-220ENST00000569842 CRIPTQ9P021 101 aa5.58□□□□□ -1.52
NUP93-220ENST00000569842 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
NUP93-220ENST00000569842 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
NUP93-220ENST00000569842 LCE2BO14633 110 aa5.54□□□□□ -1.52
NUP93-220ENST00000569842 SPRR2GQ9BYE4 73 aa5.54□□□□□ -1.52
NUP93-220ENST00000569842 A0A1B0GU69 56 aa5.53□□□□□ -1.52
NUP93-220ENST00000569842 R4GN34 69 aa5.53□□□□□ -1.52
NUP93-220ENST00000569842 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
NUP93-220ENST00000569842 M0QZ58 72 aa5.51□□□□□ -1.53
NUP93-220ENST00000569842 Q1T7F1 81 aa5.49□□□□□ -1.53
NUP93-220ENST00000569842 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
NUP93-220ENST00000569842 V9GYY9 64 aa5.47□□□□□ -1.53
NUP93-220ENST00000569842 A0A1B0GU33 70 aa5.46□□□□□ -1.54
NUP93-220ENST00000569842 USH2AO75445 5202 aa5.46□□□□□ -1.54
NUP93-220ENST00000569842 Q5VV11 94 aa5.44□□□□□ -1.54
NUP93-220ENST00000569842 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
NUP93-220ENST00000569842 KRTAP19-8Q3LI54 63 aa5.43□□□□□ -1.54
NUP93-220ENST00000569842 LINC01554Q52M75 96 aa5.43□□□□□ -1.54
NUP93-220ENST00000569842 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
NUP93-220ENST00000569842 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.55
NUP93-220ENST00000569842 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
NUP93-220ENST00000569842 A6NED7 52 aa5.39□□□□□ -1.55
NUP93-220ENST00000569842 MT1BP07438 61 aa5.39□□□□□ -1.55
NUP93-220ENST00000569842 A0A0D9SG42 100 aa5.33□□□□□ -1.56
NUP93-220ENST00000569842 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
NUP93-220ENST00000569842 CRCT1Q9UGL9 99 aa5.31□□□□□ -1.56
NUP93-220ENST00000569842 UQCR11O14957 56 aa5.31□□□□□ -1.56
NUP93-220ENST00000569842 PLAC4Q8WY50 150 aa5.31□□□□□ -1.56
NUP93-220ENST00000569842 A6NN06 94 aa5.28□□□□□ -1.56
NUP93-220ENST00000569842 KRTAP19-6Q3LI70 58 aa5.25□□□□□ -1.57
NUP93-220ENST00000569842 MIR22HGQ0VDD5 57 aa5.23□□□□□ -1.57
NUP93-220ENST00000569842 KRTAP9-6A0A140TA67 174 aa5.22□□□□□ -1.57
NUP93-220ENST00000569842 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.57
NUP93-220ENST00000569842 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
NUP93-220ENST00000569842 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.58
NUP93-220ENST00000569842 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
NUP93-220ENST00000569842 KRTAP12-2P59991 146 aa5.19□□□□□ -1.58
NUP93-220ENST00000569842 KRTAP10-5P60370 271 aa5.17□□□□□ -1.58
NUP93-220ENST00000569842 PRAC1Q96KF2 57 aa5.17□□□□□ -1.58
NUP93-220ENST00000569842 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
NUP93-220ENST00000569842 MT1XP80297 61 aa5.15□□□□□ -1.58
NUP93-220ENST00000569842 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.59
NUP93-220ENST00000569842 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
NUP93-220ENST00000569842 K7ERS5 55 aa5.04□□□□□ -1.6
NUP93-220ENST00000569842 C10orf95Q9H7T3 257 aa4.95□□□□□ -1.62
NUP93-220ENST00000569842 KRTAP10-7P60409 375 aaPredicted RBP4.94□□□□□ -1.62
NUP93-220ENST00000569842 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
NUP93-220ENST00000569842 MACF1Q9UPN3 7388 aaKnown RBP4.91□□□□□ -1.62
NUP93-220ENST00000569842 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
NUP93-220ENST00000569842 KMT2DO14686 5537 aa4.84□□□□□ -1.63
NUP93-220ENST00000569842 TNP1P09430 55 aa4.84□□□□□ -1.63
NUP93-220ENST00000569842 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
NUP93-220ENST00000569842 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
NUP93-220ENST00000569842 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
NUP93-220ENST00000569842 ROMO1P60602 79 aa4.79□□□□□ -1.64
NUP93-220ENST00000569842 KRTAP8-1Q8IUC2 63 aa4.76□□□□□ -1.65
NUP93-220ENST00000569842 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
NUP93-220ENST00000569842 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
NUP93-220ENST00000569842 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
NUP93-220ENST00000569842 H3BS24 57 aa4.7□□□□□ -1.66
NUP93-220ENST00000569842 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
NUP93-220ENST00000569842 KRTAP5-9P26371 169 aa4.67□□□□□ -1.66
NUP93-220ENST00000569842 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
NUP93-220ENST00000569842 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
NUP93-220ENST00000569842 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
NUP93-220ENST00000569842 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
NUP93-220ENST00000569842 MUC12Q9UKN1 5478 aa4.57□□□□□ -1.68
NUP93-220ENST00000569842 MT1EP04732 61 aa4.54□□□□□ -1.68
NUP93-220ENST00000569842 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
NUP93-220ENST00000569842 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
NUP93-220ENST00000569842 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms