RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 ATP5EP2Q5VTU8 51 aa4.3□□□□□ -1.72
GTF3C1-210ENST00000569394 LINC00643Q86TS7 51 aa4.3□□□□□ -1.72
GTF3C1-210ENST00000569394 TRAV22A0A0B4J277 110 aa4.27□□□□□ -1.73
GTF3C1-210ENST00000569394 H0Y9P7 68 aa4.27□□□□□ -1.73
GTF3C1-210ENST00000569394 CYP4F30PQ9H0H9 118 aa4.27□□□□□ -1.73
GTF3C1-210ENST00000569394 S4R3F8 94 aa4.27□□□□□ -1.73
GTF3C1-210ENST00000569394 USH2AO75445 5202 aa4.26□□□□□ -1.73
GTF3C1-210ENST00000569394 J3QR89 54 aa4.24□□□□□ -1.73
GTF3C1-210ENST00000569394 UQCRQO14949 82 aa4.24□□□□□ -1.73
GTF3C1-210ENST00000569394 LCA10Q71F78 164 aa4.24□□□□□ -1.73
GTF3C1-210ENST00000569394 FAM236AA0A1B0GUQ0 79 aa4.23□□□□□ -1.73
GTF3C1-210ENST00000569394 FAM236BA0A1B0GV22 79 aa4.23□□□□□ -1.73
GTF3C1-210ENST00000569394 LOC101927531A0A1B0GV80 90 aa4.23□□□□□ -1.73
GTF3C1-210ENST00000569394 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
GTF3C1-210ENST00000569394 LINC00208Q96KT6 92 aa4.22□□□□□ -1.73
GTF3C1-210ENST00000569394 CSAG1Q6PB30 78 aa4.2□□□□□ -1.74
GTF3C1-210ENST00000569394 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
GTF3C1-210ENST00000569394 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
GTF3C1-210ENST00000569394 ATOX1O00244 68 aa4.19□□□□□ -1.74
GTF3C1-210ENST00000569394 SCGB1A1P11684 91 aa4.19□□□□□ -1.74
GTF3C1-210ENST00000569394 MP68P56378 58 aa4.18□□□□□ -1.74
GTF3C1-210ENST00000569394 KLKP1Q107X0 134 aa4.18□□□□□ -1.74
GTF3C1-210ENST00000569394 OCR1Q9BZK8 76 aa4.18□□□□□ -1.74
GTF3C1-210ENST00000569394 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
GTF3C1-210ENST00000569394 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
GTF3C1-210ENST00000569394 MT-ATP8P03928 68 aa4.15□□□□□ -1.75
GTF3C1-210ENST00000569394 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
GTF3C1-210ENST00000569394 K7ERU9 68 aa4.12□□□□□ -1.75
GTF3C1-210ENST00000569394 NDUFC1O43677 76 aa4.1□□□□□ -1.75
GTF3C1-210ENST00000569394 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.75
GTF3C1-210ENST00000569394 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
GTF3C1-210ENST00000569394 A8MUN3 132 aa4.05□□□□□ -1.76
GTF3C1-210ENST00000569394 KRTAP19-6Q3LI70 58 aa4.05□□□□□ -1.76
GTF3C1-210ENST00000569394 IMUPQ9GZP8 106 aa4.05□□□□□ -1.76
GTF3C1-210ENST00000569394 H3BPC8 53 aa4.04□□□□□ -1.76
GTF3C1-210ENST00000569394 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
GTF3C1-210ENST00000569394 ADM2Q7Z4H4 148 aa4.04□□□□□ -1.76
GTF3C1-210ENST00000569394 SNURFQ9Y675 71 aa4.03□□□□□ -1.76
GTF3C1-210ENST00000569394 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
GTF3C1-210ENST00000569394 Q5VV11 94 aa4.02□□□□□ -1.77
GTF3C1-210ENST00000569394 MT1BP07438 61 aa4.01□□□□□ -1.77
GTF3C1-210ENST00000569394 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
GTF3C1-210ENST00000569394 DMAC1Q96GE9 116 aa4□□□□□ -1.77
GTF3C1-210ENST00000569394 SMIM20Q8N5G0 67 aa3.99□□□□□ -1.77
GTF3C1-210ENST00000569394 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
GTF3C1-210ENST00000569394 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
GTF3C1-210ENST00000569394 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
GTF3C1-210ENST00000569394 A6NN06 94 aa3.96□□□□□ -1.78
GTF3C1-210ENST00000569394 P0C880 135 aa3.95□□□□□ -1.78
GTF3C1-210ENST00000569394 ACYP2P14621 99 aa3.95□□□□□ -1.78
GTF3C1-210ENST00000569394 C20orf197Q8N268 126 aa3.95□□□□□ -1.78
GTF3C1-210ENST00000569394 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
GTF3C1-210ENST00000569394 H0YAA0 97 aa3.94□□□□□ -1.78
GTF3C1-210ENST00000569394 CHKB-CPT1BH3BT56 60 aa3.93□□□□□ -1.78
GTF3C1-210ENST00000569394 SERP2Q8N6R1 65 aa3.92□□□□□ -1.78
GTF3C1-210ENST00000569394 M0QZ58 72 aa3.91□□□□□ -1.78
GTF3C1-210ENST00000569394 LINC01554Q52M75 96 aa3.91□□□□□ -1.78
GTF3C1-210ENST00000569394 R4GN34 69 aa3.91□□□□□ -1.78
GTF3C1-210ENST00000569394 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
GTF3C1-210ENST00000569394 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
GTF3C1-210ENST00000569394 SPTSSBQ8NFR3 76 aa3.86□□□□□ -1.79
GTF3C1-210ENST00000569394 PLAC4Q8WY50 150 aa3.86□□□□□ -1.79
GTF3C1-210ENST00000569394 NEBP20929 6669 aa3.85□□□□□ -1.79
GTF3C1-210ENST00000569394 COX7CP15954 63 aa3.83□□□□□ -1.8
GTF3C1-210ENST00000569394 SPANXA2-OT1Q8N9U9 137 aa3.82□□□□□ -1.8
GTF3C1-210ENST00000569394 CYSTM1Q9H1C7 97 aa3.81□□□□□ -1.8
GTF3C1-210ENST00000569394 COA5Q86WW8 74 aa3.8□□□□□ -1.8
GTF3C1-210ENST00000569394 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
GTF3C1-210ENST00000569394 MT1XP80297 61 aa3.78□□□□□ -1.8
GTF3C1-210ENST00000569394 ANAPC13Q9BS18 74 aa3.77□□□□□ -1.81
GTF3C1-210ENST00000569394 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
GTF3C1-210ENST00000569394 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
GTF3C1-210ENST00000569394 H7BZZ5 65 aa3.74□□□□□ -1.81
GTF3C1-210ENST00000569394 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
GTF3C1-210ENST00000569394 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
GTF3C1-210ENST00000569394 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
GTF3C1-210ENST00000569394 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
GTF3C1-210ENST00000569394 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
GTF3C1-210ENST00000569394 KMT2DO14686 5537 aa3.71□□□□□ -1.82
GTF3C1-210ENST00000569394 SEC61GP60059 68 aa3.7□□□□□ -1.82
GTF3C1-210ENST00000569394 SERP1Q9Y6X1 66 aa3.7□□□□□ -1.82
GTF3C1-210ENST00000569394 A0A0D9SG42 100 aa3.69□□□□□ -1.82
GTF3C1-210ENST00000569394 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
GTF3C1-210ENST00000569394 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
GTF3C1-210ENST00000569394 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
GTF3C1-210ENST00000569394 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
GTF3C1-210ENST00000569394 CAMK2N1Q7Z7J9 78 aa3.64□□□□□ -1.83
GTF3C1-210ENST00000569394 MT3P25713 68 aa3.63□□□□□ -1.83
GTF3C1-210ENST00000569394 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
GTF3C1-210ENST00000569394 A0A1B0GU33 70 aa3.62□□□□□ -1.83
GTF3C1-210ENST00000569394 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
GTF3C1-210ENST00000569394 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
GTF3C1-210ENST00000569394 A0A1B0GU69 56 aa3.61□□□□□ -1.83
GTF3C1-210ENST00000569394 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
GTF3C1-210ENST00000569394 SPRR2EP22531 72 aa3.58□□□□□ -1.84
GTF3C1-210ENST00000569394 SPRR2BP35325 72 aa3.58□□□□□ -1.84
GTF3C1-210ENST00000569394 SPRR2AP35326 72 aa3.58□□□□□ -1.84
GTF3C1-210ENST00000569394 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
GTF3C1-210ENST00000569394 A8MU10 97 aa3.56□□□□□ -1.84
GTF3C1-210ENST00000569394 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms