RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 COX7CP15954 63 aa4.6□□□□□ -1.67
UBR1-210ENST00000569337 C20orf197Q8N268 126 aa4.6□□□□□ -1.67
UBR1-210ENST00000569337 ANAPC13Q9BS18 74 aa4.58□□□□□ -1.68
UBR1-210ENST00000569337 MT2AP02795 61 aa4.57□□□□□ -1.68
UBR1-210ENST00000569337 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
UBR1-210ENST00000569337 CYSTM1Q9H1C7 97 aa4.56□□□□□ -1.68
UBR1-210ENST00000569337 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
UBR1-210ENST00000569337 CCDC179H3BU77 68 aa4.53□□□□□ -1.68
UBR1-210ENST00000569337 MT1FP04733 61 aa4.53□□□□□ -1.68
UBR1-210ENST00000569337 USH2AO75445 5202 aa4.5□□□□□ -1.69
UBR1-210ENST00000569337 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
UBR1-210ENST00000569337 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
UBR1-210ENST00000569337 S4R3F8 94 aa4.49□□□□□ -1.69
UBR1-210ENST00000569337 A8MUN3 132 aa4.48□□□□□ -1.69
UBR1-210ENST00000569337 H7BZZ5 65 aa4.48□□□□□ -1.69
UBR1-210ENST00000569337 LCA10Q71F78 164 aa4.48□□□□□ -1.69
UBR1-210ENST00000569337 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
UBR1-210ENST00000569337 SPANXA2-OT1Q8N9U9 137 aa4.46□□□□□ -1.7
UBR1-210ENST00000569337 NDUFC1O43677 76 aa4.45□□□□□ -1.7
UBR1-210ENST00000569337 SSPOA2VEC9 5147 aa4.43□□□□□ -1.7
UBR1-210ENST00000569337 ACYP2P14621 99 aa4.41□□□□□ -1.7
UBR1-210ENST00000569337 CSAG1Q6PB30 78 aa4.4□□□□□ -1.71
UBR1-210ENST00000569337 KRTAP19-1Q8IUB9 90 aa4.37□□□□□ -1.71
UBR1-210ENST00000569337 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
UBR1-210ENST00000569337 PCP4P48539 62 aa4.36□□□□□ -1.71
UBR1-210ENST00000569337 COA5Q86WW8 74 aa4.34□□□□□ -1.71
UBR1-210ENST00000569337 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
UBR1-210ENST00000569337 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
UBR1-210ENST00000569337 CHKB-CPT1BH3BT56 60 aa4.32□□□□□ -1.72
UBR1-210ENST00000569337 TMEM258P61165 79 aa4.32□□□□□ -1.72
UBR1-210ENST00000569337 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
UBR1-210ENST00000569337 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
UBR1-210ENST00000569337 ATP5EP56381 51 aaPredicted RBP4.29□□□□□ -1.72
UBR1-210ENST00000569337 H0YAA0 97 aa4.27□□□□□ -1.73
UBR1-210ENST00000569337 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
UBR1-210ENST00000569337 SPTSSBQ8NFR3 76 aa4.26□□□□□ -1.73
UBR1-210ENST00000569337 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
UBR1-210ENST00000569337 P0C880 135 aa4.24□□□□□ -1.73
UBR1-210ENST00000569337 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
UBR1-210ENST00000569337 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
UBR1-210ENST00000569337 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
UBR1-210ENST00000569337 SPRR2GQ9BYE4 73 aa4.2□□□□□ -1.74
UBR1-210ENST00000569337 Q5VV11 94 aa4.19□□□□□ -1.74
UBR1-210ENST00000569337 SERP1Q9Y6X1 66 aa4.19□□□□□ -1.74
UBR1-210ENST00000569337 MT1BP07438 61 aa4.16□□□□□ -1.74
UBR1-210ENST00000569337 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
UBR1-210ENST00000569337 CRIPTQ9P021 101 aa4.16□□□□□ -1.74
UBR1-210ENST00000569337 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
UBR1-210ENST00000569337 A6NN06 94 aa4.14□□□□□ -1.75
UBR1-210ENST00000569337 M0QZ58 72 aa4.1□□□□□ -1.75
UBR1-210ENST00000569337 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
UBR1-210ENST00000569337 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
UBR1-210ENST00000569337 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
UBR1-210ENST00000569337 R4GN34 69 aa4.1□□□□□ -1.75
UBR1-210ENST00000569337 A0A1B0GU69 56 aa4.09□□□□□ -1.75
UBR1-210ENST00000569337 SEC61GP60059 68 aa4.09□□□□□ -1.75
UBR1-210ENST00000569337 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
UBR1-210ENST00000569337 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
UBR1-210ENST00000569337 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
UBR1-210ENST00000569337 KRTAP4-8Q9BYQ9 185 aa4.07□□□□□ -1.76
UBR1-210ENST00000569337 A0A1B0GU33 70 aa4.05□□□□□ -1.76
UBR1-210ENST00000569337 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
UBR1-210ENST00000569337 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
UBR1-210ENST00000569337 Q1T7F1 81 aa4.03□□□□□ -1.76
UBR1-210ENST00000569337 LINC01554Q52M75 96 aa4.03□□□□□ -1.76
UBR1-210ENST00000569337 SPATA8Q6RVD6 105 aa4.03□□□□□ -1.76
UBR1-210ENST00000569337 PRR15LQ9BU68 103 aa4.02□□□□□ -1.77
UBR1-210ENST00000569337 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
UBR1-210ENST00000569337 V9GYY9 64 aa3.99□□□□□ -1.77
UBR1-210ENST00000569337 PSPHP1O15172 72 aa3.98□□□□□ -1.77
UBR1-210ENST00000569337 A0A0D9SG42 100 aa3.96□□□□□ -1.78
UBR1-210ENST00000569337 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
UBR1-210ENST00000569337 A8MU10 97 aa3.95□□□□□ -1.78
UBR1-210ENST00000569337 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
UBR1-210ENST00000569337 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
UBR1-210ENST00000569337 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
UBR1-210ENST00000569337 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
UBR1-210ENST00000569337 UQCR11O14957 56 aa3.91□□□□□ -1.78
UBR1-210ENST00000569337 MT1XP80297 61 aa3.91□□□□□ -1.78
UBR1-210ENST00000569337 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
UBR1-210ENST00000569337 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
UBR1-210ENST00000569337 NEBP20929 6669 aa3.88□□□□□ -1.79
UBR1-210ENST00000569337 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
UBR1-210ENST00000569337 MIR22HGQ0VDD5 57 aa3.87□□□□□ -1.79
UBR1-210ENST00000569337 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
UBR1-210ENST00000569337 KMT2DO14686 5537 aa3.86□□□□□ -1.79
UBR1-210ENST00000569337 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
UBR1-210ENST00000569337 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
UBR1-210ENST00000569337 A6NED7 52 aa3.83□□□□□ -1.8
UBR1-210ENST00000569337 CAMK2N1Q7Z7J9 78 aa3.8□□□□□ -1.8
UBR1-210ENST00000569337 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
UBR1-210ENST00000569337 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
UBR1-210ENST00000569337 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
UBR1-210ENST00000569337 KRTAP4-8A0A0G2JLE6 195 aa3.74□□□□□ -1.81
UBR1-210ENST00000569337 SPRR2EP22531 72 aa3.74□□□□□ -1.81
UBR1-210ENST00000569337 SPRR2BP35325 72 aa3.74□□□□□ -1.81
UBR1-210ENST00000569337 SPRR2AP35326 72 aa3.74□□□□□ -1.81
UBR1-210ENST00000569337 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
UBR1-210ENST00000569337 CDC42SE1Q9NRR8 79 aa3.74□□□□□ -1.81
UBR1-210ENST00000569337 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms