RNA–Protein interactions for RNA: ENST00000568140.1

AC009054.1-201, humanhuman

TSL 3 BASIC

Gene AC009054.1, Length 427 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.1-201ENST00000568140 TMEM258P61165 79 aa3.38□□□□□ -1.87
AC009054.1-201ENST00000568140 SPANXA2-OT1Q8N9U9 137 aa3.37□□□□□ -1.87
AC009054.1-201ENST00000568140 HMCN2Q8NDA2 5059 aa3.37□□□□□ -1.87
AC009054.1-201ENST00000568140 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
AC009054.1-201ENST00000568140 SPINK7P58062 85 aa3.36□□□□□ -1.87
AC009054.1-201ENST00000568140 PCOTHQ58A44 107 aa3.36□□□□□ -1.87
AC009054.1-201ENST00000568140 C7orf65Q6ZTY9 151 aa3.36□□□□□ -1.87
AC009054.1-201ENST00000568140 HRES1P13985 223 aa3.34□□□□□ -1.87
AC009054.1-201ENST00000568140 ATP5EP56381 51 aaPredicted RBP3.34□□□□□ -1.87
AC009054.1-201ENST00000568140 SEC61BP60468 96 aaKnown RBP3.34□□□□□ -1.87
AC009054.1-201ENST00000568140 FAM236DA0A1B0GTK5 79 aa3.33□□□□□ -1.88
AC009054.1-201ENST00000568140 FAM236CP0DP71 79 aa3.33□□□□□ -1.88
AC009054.1-201ENST00000568140 RPS28P62857 69 aaKnown RBP3.3□□□□□ -1.88
AC009054.1-201ENST00000568140 ACYP2P14621 99 aa3.29□□□□□ -1.88
AC009054.1-201ENST00000568140 A8MUN3 132 aa3.28□□□□□ -1.88
AC009054.1-201ENST00000568140 C4orf26Q17RF5 130 aa3.28□□□□□ -1.88
AC009054.1-201ENST00000568140 COX6B2Q6YFQ2 88 aa3.28□□□□□ -1.88
AC009054.1-201ENST00000568140 DMAC1Q96GE9 116 aa3.28□□□□□ -1.88
AC009054.1-201ENST00000568140 SERP1Q9Y6X1 66 aa3.28□□□□□ -1.88
AC009054.1-201ENST00000568140 KRTAP3-1Q9BYR8 98 aa3.27□□□□□ -1.89
AC009054.1-201ENST00000568140 MPLKIPQ8TAP9 179 aa3.26□□□□□ -1.89
AC009054.1-201ENST00000568140 KRTAP4-1Q9BYQ7 146 aa3.24□□□□□ -1.89
AC009054.1-201ENST00000568140 RBM12B-AS1Q9P1G2 102 aa3.24□□□□□ -1.89
AC009054.1-201ENST00000568140 H3BS24 57 aa3.23□□□□□ -1.89
AC009054.1-201ENST00000568140 COA5Q86WW8 74 aa3.23□□□□□ -1.89
AC009054.1-201ENST00000568140 SMIM26A0A096LP01 95 aa3.21□□□□□ -1.9
AC009054.1-201ENST00000568140 H1FX-AS1Q4G0G2 97 aa3.21□□□□□ -1.9
AC009054.1-201ENST00000568140 CHKB-CPT1BH3BT56 60 aa3.2□□□□□ -1.9
AC009054.1-201ENST00000568140 RNF213Q63HN8 5207 aa3.18□□□□□ -1.9
AC009054.1-201ENST00000568140 KRTAP19-2Q3LHN2 52 aa3.17□□□□□ -1.9
AC009054.1-201ENST00000568140 SPTSSBQ8NFR3 76 aa3.17□□□□□ -1.9
AC009054.1-201ENST00000568140 UBR4Q5T4S7 5183 aa3.17□□□□□ -1.9
AC009054.1-201ENST00000568140 MUC2Q02817 5179 aa3.15□□□□□ -1.9
AC009054.1-201ENST00000568140 Q1T7F1 81 aa3.15□□□□□ -1.91
AC009054.1-201ENST00000568140 S4R3F8 94 aa3.15□□□□□ -1.91
AC009054.1-201ENST00000568140 V9GYY9 64 aa3.15□□□□□ -1.91
AC009054.1-201ENST00000568140 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
AC009054.1-201ENST00000568140 LCA10Q71F78 164 aa3.14□□□□□ -1.91
AC009054.1-201ENST00000568140 LINC01558Q9Y6Z2 57 aa3.14□□□□□ -1.91
AC009054.1-201ENST00000568140 CSAG1Q6PB30 78 aa3.12□□□□□ -1.91
AC009054.1-201ENST00000568140 FAT4Q6V0I7 4981 aa3.11□□□□□ -1.91
AC009054.1-201ENST00000568140 SEC61GP60059 68 aa3.08□□□□□ -1.92
AC009054.1-201ENST00000568140 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
AC009054.1-201ENST00000568140 A0A1B0GU69 56 aa3.07□□□□□ -1.92
AC009054.1-201ENST00000568140 PRR15LQ9BU68 103 aa3.07□□□□□ -1.92
AC009054.1-201ENST00000568140 H0YAA0 97 aa3.05□□□□□ -1.92
AC009054.1-201ENST00000568140 PSPHP1O15172 72 aa3.04□□□□□ -1.92
AC009054.1-201ENST00000568140 Q5VV11 94 aa3.04□□□□□ -1.92
AC009054.1-201ENST00000568140 KRTAP10-6P60371 365 aaPredicted RBP3.03□□□□□ -1.92
AC009054.1-201ENST00000568140 MT1HP80294 61 aa3.03□□□□□ -1.92
AC009054.1-201ENST00000568140 ADM2Q7Z4H4 148 aa3.01□□□□□ -1.93
AC009054.1-201ENST00000568140 A0A1B0GU33 70 aa3□□□□□ -1.93
AC009054.1-201ENST00000568140 M0R2T5 61 aa2.99□□□□□ -1.93
AC009054.1-201ENST00000568140 UQCR11O14957 56 aa2.99□□□□□ -1.93
AC009054.1-201ENST00000568140 P0C880 135 aa2.98□□□□□ -1.93
AC009054.1-201ENST00000568140 A6NED7 52 aa2.96□□□□□ -1.94
AC009054.1-201ENST00000568140 SPATA8Q6RVD6 105 aa2.96□□□□□ -1.94
AC009054.1-201ENST00000568140 M0QZ58 72 aa2.95□□□□□ -1.94
AC009054.1-201ENST00000568140 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
AC009054.1-201ENST00000568140 CRIPTQ9P021 101 aa2.94□□□□□ -1.94
AC009054.1-201ENST00000568140 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
AC009054.1-201ENST00000568140 MT2AP02795 61 aa2.91□□□□□ -1.94
AC009054.1-201ENST00000568140 KRTAP13-4Q3LI77 160 aa2.91□□□□□ -1.94
AC009054.1-201ENST00000568140 R4GN34 69 aa2.91□□□□□ -1.94
AC009054.1-201ENST00000568140 BRK1Q8WUW1 75 aa2.9□□□□□ -1.95
AC009054.1-201ENST00000568140 KRTAP10-10P60014 251 aa2.89□□□□□ -1.95
AC009054.1-201ENST00000568140 MT1FP04733 61 aa2.88□□□□□ -1.95
AC009054.1-201ENST00000568140 A8MU10 97 aa2.86□□□□□ -1.95
AC009054.1-201ENST00000568140 SPRR2GQ9BYE4 73 aa2.86□□□□□ -1.95
AC009054.1-201ENST00000568140 A0A0D9SG42 100 aa2.85□□□□□ -1.95
AC009054.1-201ENST00000568140 PRO0628Q9UI54 55 aa2.85□□□□□ -1.95
AC009054.1-201ENST00000568140 A6NN06 94 aa2.83□□□□□ -1.96
AC009054.1-201ENST00000568140 K7ERS5 55 aa2.83□□□□□ -1.96
AC009054.1-201ENST00000568140 LINC01554Q52M75 96 aa2.82□□□□□ -1.96
AC009054.1-201ENST00000568140 KRTAP12-1P59990 96 aa2.81□□□□□ -1.96
AC009054.1-201ENST00000568140 KRTAP19-8Q3LI54 63 aa2.8□□□□□ -1.96
AC009054.1-201ENST00000568140 SPINT4Q6UDR6 99 aa2.8□□□□□ -1.96
AC009054.1-201ENST00000568140 KRTAP12-2P59991 146 aa2.79□□□□□ -1.96
AC009054.1-201ENST00000568140 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
AC009054.1-201ENST00000568140 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
AC009054.1-201ENST00000568140 PLAC4Q8WY50 150 aa2.77□□□□□ -1.97
AC009054.1-201ENST00000568140 MT1BP07438 61 aa2.74□□□□□ -1.97
AC009054.1-201ENST00000568140 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
AC009054.1-201ENST00000568140 USH2AO75445 5202 aa2.71□□□□□ -1.98
AC009054.1-201ENST00000568140 ROMO1P60602 79 aa2.7□□□□□ -1.98
AC009054.1-201ENST00000568140 KRTAP15-1Q3LI76 137 aa2.7□□□□□ -1.98
AC009054.1-201ENST00000568140 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
AC009054.1-201ENST00000568140 KRTAP10-7P60409 375 aaPredicted RBP2.69□□□□□ -1.98
AC009054.1-201ENST00000568140 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
AC009054.1-201ENST00000568140 SSPOA2VEC9 5147 aa2.64□□□□□ -1.99
AC009054.1-201ENST00000568140 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
AC009054.1-201ENST00000568140 MT1XP80297 61 aa2.63□□□□□ -1.99
AC009054.1-201ENST00000568140 KTN1-AS1Q86SY8 53 aa2.63□□□□□ -1.99
AC009054.1-201ENST00000568140 PRO2289Q9P1D8 64 aa2.63□□□□□ -1.99
AC009054.1-201ENST00000568140 KRTAP25-1Q3LHN0 102 aa2.62□□□□□ -1.99
AC009054.1-201ENST00000568140 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
AC009054.1-201ENST00000568140 TNP1P09430 55 aa2.61□□□□□ -1.99
AC009054.1-201ENST00000568140 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
AC009054.1-201ENST00000568140 KRTAP19-6Q3LI70 58 aa2.6□□□□□ -1.99
AC009054.1-201ENST00000568140 KRTAP23-1A1A580 65 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 529 ms