RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 IGLV7-43P04211 117 aa3.1□□□□□ -1.91
CAPN3-217ENST00000567817 KRTAP10-1P60331 282 aa3.1□□□□□ -1.91
CAPN3-217ENST00000567817 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
CAPN3-217ENST00000567817 Q96NJ1 140 aa3.1□□□□□ -1.91
CAPN3-217ENST00000567817 C8orf17Q9NRJ1 99 aa3.1□□□□□ -1.91
CAPN3-217ENST00000567817 LRP2P98164 4655 aa3.09□□□□□ -1.91
CAPN3-217ENST00000567817 MRPL34Q9BQ48 92 aaKnown RBP3.09□□□□□ -1.91
CAPN3-217ENST00000567817 LIMD2Q9BT23 127 aa3.09□□□□□ -1.91
CAPN3-217ENST00000567817 PKHD1L1Q86WI1 4243 aa3.09□□□□□ -1.92
CAPN3-217ENST00000567817 LOC101927531A0A1B0GV80 90 aa3.08□□□□□ -1.92
CAPN3-217ENST00000567817 FAM229BQ4G0N7 80 aa3.08□□□□□ -1.92
CAPN3-217ENST00000567817 DNAH8Q96JB1 4490 aa3.07□□□□□ -1.92
CAPN3-217ENST00000567817 LRP1Q07954 4544 aaKnown RBP3.07□□□□□ -1.92
CAPN3-217ENST00000567817 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
CAPN3-217ENST00000567817 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
CAPN3-217ENST00000567817 IGHV6-1A0A0B4J1U7 121 aa3.06□□□□□ -1.92
CAPN3-217ENST00000567817 Q6ZSA8 131 aa3.06□□□□□ -1.92
CAPN3-217ENST00000567817 TYMSOSQ8TAI1 123 aa3.06□□□□□ -1.92
CAPN3-217ENST00000567817 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
CAPN3-217ENST00000567817 FAT3Q8TDW7 4589 aa3.05□□□□□ -1.92
CAPN3-217ENST00000567817 NDUFS5O43920 106 aa3.05□□□□□ -1.92
CAPN3-217ENST00000567817 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
CAPN3-217ENST00000567817 BRK1Q8WUW1 75 aa3.04□□□□□ -1.92
CAPN3-217ENST00000567817 PRR4Q16378 134 aa3.03□□□□□ -1.92
CAPN3-217ENST00000567817 CIRBP-AS1Q8TBR5 109 aa3.03□□□□□ -1.92
CAPN3-217ENST00000567817 MUC2Q02817 5179 aa3.02□□□□□ -1.93
CAPN3-217ENST00000567817 KRTAP10-4P60372 401 aaPredicted RBP3.02□□□□□ -1.93
CAPN3-217ENST00000567817 COA5Q86WW8 74 aa3.02□□□□□ -1.93
CAPN3-217ENST00000567817 TNXBP22105 4242 aa3.01□□□□□ -1.93
CAPN3-217ENST00000567817 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
CAPN3-217ENST00000567817 LINC00313P59037 77 aa3.01□□□□□ -1.93
CAPN3-217ENST00000567817 RPS29P62273 56 aaKnown RBP3.01□□□□□ -1.93
CAPN3-217ENST00000567817 SPAG11AQ6PDA7 123 aa3□□□□□ -1.93
CAPN3-217ENST00000567817 SPINK6Q6UWN8 80 aa3□□□□□ -1.93
CAPN3-217ENST00000567817 PSPHP1O15172 72 aa2.99□□□□□ -1.93
CAPN3-217ENST00000567817 SPINK1P00995 79 aa2.99□□□□□ -1.93
CAPN3-217ENST00000567817 ACYP2P14621 99 aa2.99□□□□□ -1.93
CAPN3-217ENST00000567817 KRTAP13-3Q3SY46 172 aa2.99□□□□□ -1.93
CAPN3-217ENST00000567817 PCOTHQ58A44 107 aa2.99□□□□□ -1.93
CAPN3-217ENST00000567817 ANAPC11Q9NYG5 84 aa2.99□□□□□ -1.93
CAPN3-217ENST00000567817 LINC01558Q9Y6Z2 57 aa2.99□□□□□ -1.93
CAPN3-217ENST00000567817 CHKB-CPT1BH3BT56 60 aa2.98□□□□□ -1.93
CAPN3-217ENST00000567817 Q5VV11 94 aa2.98□□□□□ -1.93
CAPN3-217ENST00000567817 A8MUN3 132 aa2.97□□□□□ -1.93
CAPN3-217ENST00000567817 DMAC1Q96GE9 116 aa2.97□□□□□ -1.93
CAPN3-217ENST00000567817 PRR15LQ9BU68 103 aa2.97□□□□□ -1.93
CAPN3-217ENST00000567817 HRES1P13985 223 aa2.96□□□□□ -1.94
CAPN3-217ENST00000567817 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
CAPN3-217ENST00000567817 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
CAPN3-217ENST00000567817 KRTAP13-2Q52LG2 175 aa2.95□□□□□ -1.94
CAPN3-217ENST00000567817 Q5W150 140 aa2.95□□□□□ -1.94
CAPN3-217ENST00000567817 ATP11AUNQ6ZP68 121 aa2.95□□□□□ -1.94
CAPN3-217ENST00000567817 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
CAPN3-217ENST00000567817 A6NED7 52 aa2.94□□□□□ -1.94
CAPN3-217ENST00000567817 CDC42SE1Q9NRR8 79 aa2.94□□□□□ -1.94
CAPN3-217ENST00000567817 CRCT1Q9UGL9 99 aa2.93□□□□□ -1.94
CAPN3-217ENST00000567817 PMAIP1Q13794 54 aa2.92□□□□□ -1.94
CAPN3-217ENST00000567817 LINC00304Q8N9R0 145 aa2.92□□□□□ -1.94
CAPN3-217ENST00000567817 C7orf65Q6ZTY9 151 aa2.91□□□□□ -1.94
CAPN3-217ENST00000567817 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
CAPN3-217ENST00000567817 SPTSSBQ8NFR3 76 aa2.9□□□□□ -1.95
CAPN3-217ENST00000567817 A0A1B0GU69 56 aa2.89□□□□□ -1.95
CAPN3-217ENST00000567817 LCA10Q71F78 164 aa2.88□□□□□ -1.95
CAPN3-217ENST00000567817 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
CAPN3-217ENST00000567817 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
CAPN3-217ENST00000567817 C20orf166-AS1Q96NR2 134 aa2.87□□□□□ -1.95
CAPN3-217ENST00000567817 SEC61GP60059 68 aa2.86□□□□□ -1.95
CAPN3-217ENST00000567817 A8MUU9 505 aa2.85□□□□□ -1.95
CAPN3-217ENST00000567817 UQCR11O14957 56 aa2.85□□□□□ -1.95
CAPN3-217ENST00000567817 LPAP08519 4548 aa2.84□□□□□ -1.95
CAPN3-217ENST00000567817 A6NN06 94 aa2.84□□□□□ -1.95
CAPN3-217ENST00000567817 SPINK7P58062 85 aa2.84□□□□□ -1.95
CAPN3-217ENST00000567817 SPATA8Q6RVD6 105 aa2.84□□□□□ -1.95
CAPN3-217ENST00000567817 RETNLBQ9BQ08 111 aa2.84□□□□□ -1.95
CAPN3-217ENST00000567817 MIR22HGQ0VDD5 57 aa2.82□□□□□ -1.96
CAPN3-217ENST00000567817 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
CAPN3-217ENST00000567817 COX6B2Q6YFQ2 88 aa2.77□□□□□ -1.97
CAPN3-217ENST00000567817 C9orf92A6NGG3 77 aa2.76□□□□□ -1.97
CAPN3-217ENST00000567817 RPL37P61927 97 aaKnown RBP2.74□□□□□ -1.97
CAPN3-217ENST00000567817 A0A1B0GU33 70 aa2.73□□□□□ -1.97
CAPN3-217ENST00000567817 K7ERS5 55 aa2.73□□□□□ -1.97
CAPN3-217ENST00000567817 RBM12B-AS1Q9P1G2 102 aa2.72□□□□□ -1.97
CAPN3-217ENST00000567817 TPRXLQ17RH7 258 aa2.71□□□□□ -1.98
CAPN3-217ENST00000567817 H1FX-AS1Q4G0G2 97 aa2.71□□□□□ -1.98
CAPN3-217ENST00000567817 MUC17Q685J3 4493 aa2.7□□□□□ -1.98
CAPN3-217ENST00000567817 H0YAA0 97 aa2.68□□□□□ -1.98
CAPN3-217ENST00000567817 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
CAPN3-217ENST00000567817 S4R3F8 94 aa2.65□□□□□ -1.99
CAPN3-217ENST00000567817 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
CAPN3-217ENST00000567817 SSPOA2VEC9 5147 aa2.62□□□□□ -1.99
CAPN3-217ENST00000567817 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
CAPN3-217ENST00000567817 CSAG1Q6PB30 78 aa2.6□□□□□ -1.99
CAPN3-217ENST00000567817 M0QZ58 72 aa2.59□□□□□ -1.99
CAPN3-217ENST00000567817 ROMO1P60602 79 aa2.59□□□□□ -1.99
CAPN3-217ENST00000567817 MT1HP80294 61 aa2.59□□□□□ -1.99
CAPN3-217ENST00000567817 ADM2Q7Z4H4 148 aa2.59□□□□□ -1.99
CAPN3-217ENST00000567817 USH2AO75445 5202 aa2.59□□□□□ -1.99
CAPN3-217ENST00000567817 KRTAP25-1Q3LHN0 102 aa2.58□□□□□ -2
CAPN3-217ENST00000567817 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
CAPN3-217ENST00000567817 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms