RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284		S4R3F8	94 aa		4.61	□□□□□ -1.67
FANCA-223	ENST00000567284	NDUFC1	O43677	76 aa		4.59	□□□□□ -1.67
FANCA-223	ENST00000567284		A8MUN3	132 aa		4.58	□□□□□ -1.68
FANCA-223	ENST00000567284		H7BZZ5	65 aa		4.58	□□□□□ -1.68
FANCA-223	ENST00000567284	DMAC1	Q96GE9	116 aa		4.58	□□□□□ -1.68
FANCA-223	ENST00000567284	FLG	P20930	4061 aa	Predicted RBP	4.58	□□□□□ -1.68
FANCA-223	ENST00000567284	LCA10	Q71F78	164 aa		4.57	□□□□□ -1.68
FANCA-223	ENST00000567284	SPANXA2-OT1	Q8N9U9	137 aa		4.57	□□□□□ -1.68
FANCA-223	ENST00000567284	ACYP2	P14621	99 aa		4.56	□□□□□ -1.68
FANCA-223	ENST00000567284	LCE2A	Q5TA79	106 aa	Predicted RBP	4.56	□□□□□ -1.68
FANCA-223	ENST00000567284	PCP4	P48539	62 aa		4.54	□□□□□ -1.68
FANCA-223	ENST00000567284	CHKB-CPT1B	H3BT56	60 aa		4.52	□□□□□ -1.69
FANCA-223	ENST00000567284	KRTAP10-6	P60371	365 aa	Predicted RBP	4.5	□□□□□ -1.69
FANCA-223	ENST00000567284	CSAG1	Q6PB30	78 aa		4.5	□□□□□ -1.69
FANCA-223	ENST00000567284	COA5	Q86WW8	74 aa		4.48	□□□□□ -1.69
FANCA-223	ENST00000567284	TMEM258	P61165	79 aa		4.47	□□□□□ -1.69
FANCA-223	ENST00000567284	LOR	P23490	312 aa	Predicted RBP	4.45	□□□□□ -1.7
FANCA-223	ENST00000567284	ATP5E	P56381	51 aa	Predicted RBP	4.45	□□□□□ -1.7
FANCA-223	ENST00000567284	SPTSSB	Q8NFR3	76 aa		4.44	□□□□□ -1.7
FANCA-223	ENST00000567284	KRTAP9-8	Q9BYQ0	159 aa		4.41	□□□□□ -1.7
FANCA-223	ENST00000567284	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.4	□□□□□ -1.71
FANCA-223	ENST00000567284	MT2A	P02795	61 aa		4.4	□□□□□ -1.71
FANCA-223	ENST00000567284	KRTAP10-10	P60014	251 aa		4.4	□□□□□ -1.71
FANCA-223	ENST00000567284	MT1F	P04733	61 aa		4.38	□□□□□ -1.71
FANCA-223	ENST00000567284	ADM2	Q7Z4H4	148 aa		4.38	□□□□□ -1.71
FANCA-223	ENST00000567284	SERP1	Q9Y6X1	66 aa		4.34	□□□□□ -1.71
FANCA-223	ENST00000567284		H0YAA0	97 aa		4.32	□□□□□ -1.72
FANCA-223	ENST00000567284		P0C880	135 aa		4.31	□□□□□ -1.72
FANCA-223	ENST00000567284	SEC61G	P60059	68 aa		4.29	□□□□□ -1.72
FANCA-223	ENST00000567284	KRTAP9-3	Q9BYQ3	159 aa		4.26	□□□□□ -1.73
FANCA-223	ENST00000567284		A0A1B0GU69	56 aa		4.25	□□□□□ -1.73
FANCA-223	ENST00000567284		M0QZ58	72 aa		4.22	□□□□□ -1.73
FANCA-223	ENST00000567284	CRIPT	Q9P021	101 aa		4.22	□□□□□ -1.73
FANCA-223	ENST00000567284	LINC01558	Q9Y6Z2	57 aa		4.22	□□□□□ -1.73
FANCA-223	ENST00000567284		R4GN34	69 aa		4.22	□□□□□ -1.73
FANCA-223	ENST00000567284	SSPO	A2VEC9	5147 aa		4.22	□□□□□ -1.73
FANCA-223	ENST00000567284	SMIM26	A0A096LP01	95 aa		4.2	□□□□□ -1.74
FANCA-223	ENST00000567284	RPS28	P62857	69 aa	Known RBP	4.2	□□□□□ -1.74
FANCA-223	ENST00000567284	KRTAP19-1	Q8IUB9	90 aa		4.2	□□□□□ -1.74
FANCA-223	ENST00000567284	PRR15L	Q9BU68	103 aa		4.2	□□□□□ -1.74
FANCA-223	ENST00000567284	LINC01554	Q52M75	96 aa		4.18	□□□□□ -1.74
FANCA-223	ENST00000567284	SPRR2G	Q9BYE4	73 aa		4.18	□□□□□ -1.74
FANCA-223	ENST00000567284	NEB	P20929	6669 aa		4.17	□□□□□ -1.74
FANCA-223	ENST00000567284		A0A1B0GU33	70 aa		4.17	□□□□□ -1.74
FANCA-223	ENST00000567284		V9GYY9	64 aa		4.16	□□□□□ -1.74
FANCA-223	ENST00000567284	SYNE2	Q8WXH0	6885 aa	Known RBP	4.16	□□□□□ -1.74
FANCA-223	ENST00000567284	PSPHP1	O15172	72 aa		4.15	□□□□□ -1.75
FANCA-223	ENST00000567284	KRTAP13-4	Q3LI77	160 aa		4.15	□□□□□ -1.75
FANCA-223	ENST00000567284		Q1T7F1	81 aa		4.14	□□□□□ -1.75
FANCA-223	ENST00000567284	SPATA8	Q6RVD6	105 aa		4.14	□□□□□ -1.75
FANCA-223	ENST00000567284		Q5VV11	94 aa		4.13	□□□□□ -1.75
FANCA-223	ENST00000567284		A0A0D9SG42	100 aa		4.11	□□□□□ -1.75
FANCA-223	ENST00000567284		H3BS24	57 aa		4.11	□□□□□ -1.75
FANCA-223	ENST00000567284	KRTAP19-8	Q3LI54	63 aa		4.11	□□□□□ -1.75
FANCA-223	ENST00000567284	GPR98	Q8WXG9	6306 aa		4.11	□□□□□ -1.75
FANCA-223	ENST00000567284	MT1B	P07438	61 aa		4.09	□□□□□ -1.75
FANCA-223	ENST00000567284		A8MU10	97 aa		4.06	□□□□□ -1.76
FANCA-223	ENST00000567284	UQCR11	O14957	56 aa		4.06	□□□□□ -1.76
FANCA-223	ENST00000567284	PLAC4	Q8WY50	150 aa		4.06	□□□□□ -1.76
FANCA-223	ENST00000567284		A6NED7	52 aa		4.02	□□□□□ -1.77
FANCA-223	ENST00000567284	MIR22HG	Q0VDD5	57 aa		4.02	□□□□□ -1.77
FANCA-223	ENST00000567284	SPINT4	Q6UDR6	99 aa		4.02	□□□□□ -1.77
FANCA-223	ENST00000567284	USH2A	O75445	5202 aa		4.02	□□□□□ -1.77
FANCA-223	ENST00000567284		A6NN06	94 aa		3.98	□□□□□ -1.77
FANCA-223	ENST00000567284	MACF1	Q9UPN3	7388 aa	Known RBP	3.98	□□□□□ -1.77
FANCA-223	ENST00000567284	KRTAP12-1	P59990	96 aa		3.97	□□□□□ -1.77
FANCA-223	ENST00000567284	KRTAP12-2	P59991	146 aa		3.96	□□□□□ -1.78
FANCA-223	ENST00000567284	KRTAP20-1	Q3LI63	56 aa		3.96	□□□□□ -1.78
FANCA-223	ENST00000567284	KRTAP19-6	Q3LI70	58 aa		3.96	□□□□□ -1.78
FANCA-223	ENST00000567284	CAMK2N1	Q7Z7J9	78 aa		3.95	□□□□□ -1.78
FANCA-223	ENST00000567284	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.93	□□□□□ -1.78
FANCA-223	ENST00000567284	KRTAP10-5	P60370	271 aa		3.92	□□□□□ -1.78
FANCA-223	ENST00000567284	MT1X	P80297	61 aa		3.91	□□□□□ -1.78
FANCA-223	ENST00000567284	PRO2289	Q9P1D8	64 aa		3.9	□□□□□ -1.79
FANCA-223	ENST00000567284		K7ERS5	55 aa		3.88	□□□□□ -1.79
FANCA-223	ENST00000567284	CDC42SE1	Q9NRR8	79 aa		3.88	□□□□□ -1.79
FANCA-223	ENST00000567284	BRK1	Q8WUW1	75 aa		3.83	□□□□□ -1.8
FANCA-223	ENST00000567284	C10orf95	Q9H7T3	257 aa		3.78	□□□□□ -1.8
FANCA-223	ENST00000567284	KRTAP10-7	P60409	375 aa	Predicted RBP	3.76	□□□□□ -1.81
FANCA-223	ENST00000567284	KRTAP6-3	Q3LI67	103 aa		3.75	□□□□□ -1.81
FANCA-223	ENST00000567284	KMT2D	O14686	5537 aa		3.75	□□□□□ -1.81
FANCA-223	ENST00000567284	SVIP	Q8NHG7	77 aa		3.73	□□□□□ -1.81
FANCA-223	ENST00000567284	MUC12	Q9UKN1	5478 aa		3.73	□□□□□ -1.81
FANCA-223	ENST00000567284	TNP1	P09430	55 aa		3.7	□□□□□ -1.82
FANCA-223	ENST00000567284	KRTAP10-12	P60413	245 aa		3.7	□□□□□ -1.82
FANCA-223	ENST00000567284	KRTAP4-8	A0A0G2JLE6	195 aa		3.68	□□□□□ -1.82
FANCA-223	ENST00000567284	KRTAP4-8	Q9BYQ9	185 aa		3.68	□□□□□ -1.82
FANCA-223	ENST00000567284	ROMO1	P60602	79 aa		3.67	□□□□□ -1.82
FANCA-223	ENST00000567284	KRTAP8-1	Q8IUC2	63 aa		3.63	□□□□□ -1.83
FANCA-223	ENST00000567284	KRTAP25-1	Q3LHN0	102 aa		3.62	□□□□□ -1.83
FANCA-223	ENST00000567284	LCE3A	Q5TA76	89 aa		3.6	□□□□□ -1.83
FANCA-223	ENST00000567284	PMAIP1	Q13794	54 aa		3.59	□□□□□ -1.83
FANCA-223	ENST00000567284	KRTAP2-3	P0C7H8	128 aa		3.58	□□□□□ -1.84
FANCA-223	ENST00000567284	KRTAP2-4	Q9BYR9	128 aa		3.58	□□□□□ -1.84
FANCA-223	ENST00000567284	PRO0628	Q9UI54	55 aa		3.58	□□□□□ -1.84
FANCA-223	ENST00000567284	SPRR2F	Q96RM1	72 aa		3.55	□□□□□ -1.84
FANCA-223	ENST00000567284	KRTAP19-5	Q3LI72	72 aa		3.51	□□□□□ -1.85
FANCA-223	ENST00000567284	KRTAP5-9	P26371	169 aa		3.5	□□□□□ -1.85
FANCA-223	ENST00000567284	KRTAP19-7	Q3SYF9	63 aa		3.48	□□□□□ -1.85
FANCA-223	ENST00000567284	MDN1	Q9NU22	5596 aa		3.47	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms