RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
BBS4-213ENST00000567279 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
BBS4-213ENST00000567279 Q1T7F1 81 aa6.02□□□□□ -1.44
BBS4-213ENST00000567279 HERC1Q15751 4861 aa6□□□□□ -1.45
BBS4-213ENST00000567279 MUC17Q685J3 4493 aa5.99□□□□□ -1.45
BBS4-213ENST00000567279 HMCN2Q8NDA2 5059 aa5.97□□□□□ -1.45
BBS4-213ENST00000567279 PSPHP1O15172 72 aa5.96□□□□□ -1.46
BBS4-213ENST00000567279 PRR15LQ9BU68 103 aa5.96□□□□□ -1.46
BBS4-213ENST00000567279 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
BBS4-213ENST00000567279 LINC01558Q9Y6Z2 57 aa5.94□□□□□ -1.46
BBS4-213ENST00000567279 RBM12B-AS1Q9P1G2 102 aa5.94□□□□□ -1.46
BBS4-213ENST00000567279 SPTSSBQ8NFR3 76 aa5.93□□□□□ -1.46
BBS4-213ENST00000567279 KRTAP4-1Q9BYQ7 146 aa5.92□□□□□ -1.46
BBS4-213ENST00000567279 H1FX-AS1Q4G0G2 97 aa5.89□□□□□ -1.47
BBS4-213ENST00000567279 Q5VV11 94 aa5.89□□□□□ -1.47
BBS4-213ENST00000567279 S4R3F8 94 aa5.89□□□□□ -1.47
BBS4-213ENST00000567279 LCA10Q71F78 164 aa5.87□□□□□ -1.47
BBS4-213ENST00000567279 A0A1B0GU69 56 aa5.85□□□□□ -1.47
BBS4-213ENST00000567279 A6NED7 52 aa5.77□□□□□ -1.49
BBS4-213ENST00000567279 BRK1Q8WUW1 75 aa5.77□□□□□ -1.49
BBS4-213ENST00000567279 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
BBS4-213ENST00000567279 CSAG1Q6PB30 78 aa5.72□□□□□ -1.49
BBS4-213ENST00000567279 MUC2Q02817 5179 aa5.7□□□□□ -1.5
BBS4-213ENST00000567279 RNF213Q63HN8 5207 aa5.68□□□□□ -1.5
BBS4-213ENST00000567279 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
BBS4-213ENST00000567279 UQCR11O14957 56 aa5.67□□□□□ -1.5
BBS4-213ENST00000567279 A8MU10 97 aa5.66□□□□□ -1.5
BBS4-213ENST00000567279 UBR4Q5T4S7 5183 aa5.66□□□□□ -1.5
BBS4-213ENST00000567279 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
BBS4-213ENST00000567279 A0A1B0GU33 70 aa5.65□□□□□ -1.5
BBS4-213ENST00000567279 FLGP20930 4061 aaPredicted RBP5.65□□□□□ -1.51
BBS4-213ENST00000567279 KRTAP10-6P60371 365 aaPredicted RBP5.64□□□□□ -1.51
BBS4-213ENST00000567279 ADM2Q7Z4H4 148 aa5.64□□□□□ -1.51
BBS4-213ENST00000567279 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
BBS4-213ENST00000567279 P0C880 135 aa5.61□□□□□ -1.51
BBS4-213ENST00000567279 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
BBS4-213ENST00000567279 H0YAA0 97 aa5.58□□□□□ -1.52
BBS4-213ENST00000567279 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
BBS4-213ENST00000567279 KRTAP13-4Q3LI77 160 aa5.52□□□□□ -1.53
BBS4-213ENST00000567279 MT1HP80294 61 aa5.48□□□□□ -1.53
BBS4-213ENST00000567279 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
BBS4-213ENST00000567279 M0R2T5 61 aa5.47□□□□□ -1.53
BBS4-213ENST00000567279 A0A0D9SG42 100 aa5.45□□□□□ -1.54
BBS4-213ENST00000567279 M0QZ58 72 aa5.44□□□□□ -1.54
BBS4-213ENST00000567279 R4GN34 69 aa5.43□□□□□ -1.54
BBS4-213ENST00000567279 A6NN06 94 aa5.39□□□□□ -1.55
BBS4-213ENST00000567279 LINC01554Q52M75 96 aa5.37□□□□□ -1.55
BBS4-213ENST00000567279 K7ERS5 55 aa5.36□□□□□ -1.55
BBS4-213ENST00000567279 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
BBS4-213ENST00000567279 SPINT4Q6UDR6 99 aa5.31□□□□□ -1.56
BBS4-213ENST00000567279 CRIPTQ9P021 101 aa5.31□□□□□ -1.56
BBS4-213ENST00000567279 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
BBS4-213ENST00000567279 KRTAP12-2P59991 146 aa5.3□□□□□ -1.56
BBS4-213ENST00000567279 MT2AP02795 61 aa5.29□□□□□ -1.56
BBS4-213ENST00000567279 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
BBS4-213ENST00000567279 KRTAP9-8Q9BYQ0 159 aa5.28□□□□□ -1.56
BBS4-213ENST00000567279 MT1FP04733 61 aa5.26□□□□□ -1.57
BBS4-213ENST00000567279 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
BBS4-213ENST00000567279 SPRR2GQ9BYE4 73 aa5.19□□□□□ -1.58
BBS4-213ENST00000567279 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
BBS4-213ENST00000567279 ROMO1P60602 79 aa5.15□□□□□ -1.59
BBS4-213ENST00000567279 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
BBS4-213ENST00000567279 CAMK2N1Q7Z7J9 78 aa5.11□□□□□ -1.59
BBS4-213ENST00000567279 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
BBS4-213ENST00000567279 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
BBS4-213ENST00000567279 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
BBS4-213ENST00000567279 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
BBS4-213ENST00000567279 MT1BP07438 61 aa4.99□□□□□ -1.61
BBS4-213ENST00000567279 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
BBS4-213ENST00000567279 TNP1P09430 55 aa4.85□□□□□ -1.63
BBS4-213ENST00000567279 MT1XP80297 61 aa4.84□□□□□ -1.63
BBS4-213ENST00000567279 KRTAP10-5P60370 271 aa4.83□□□□□ -1.64
BBS4-213ENST00000567279 USH2AO75445 5202 aa4.83□□□□□ -1.64
BBS4-213ENST00000567279 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
BBS4-213ENST00000567279 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
BBS4-213ENST00000567279 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
BBS4-213ENST00000567279 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
BBS4-213ENST00000567279 SSPOA2VEC9 5147 aa4.67□□□□□ -1.66
BBS4-213ENST00000567279 LCE3AQ5TA76 89 aa4.65□□□□□ -1.66
BBS4-213ENST00000567279 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
BBS4-213ENST00000567279 LUZP6Q538Z0 58 aa4.61□□□□□ -1.67
BBS4-213ENST00000567279 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
BBS4-213ENST00000567279 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
BBS4-213ENST00000567279 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
BBS4-213ENST00000567279 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
BBS4-213ENST00000567279 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
BBS4-213ENST00000567279 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
BBS4-213ENST00000567279 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
BBS4-213ENST00000567279 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
BBS4-213ENST00000567279 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
BBS4-213ENST00000567279 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
BBS4-213ENST00000567279 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
BBS4-213ENST00000567279 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
BBS4-213ENST00000567279 KMT2DO14686 5537 aa4.44□□□□□ -1.7
BBS4-213ENST00000567279 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
BBS4-213ENST00000567279 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
BBS4-213ENST00000567279 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
BBS4-213ENST00000567279 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
BBS4-213ENST00000567279 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.71
BBS4-213ENST00000567279 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms