RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 KRTAP3-3Q9BYR6 98 aa10.8□□□□□ -0.68
UBFD1-208ENST00000567264 ACYP2P14621 99 aa10.79□□□□□ -0.68
UBFD1-208ENST00000567264 MT2AP02795 61 aa10.77□□□□□ -0.69
UBFD1-208ENST00000567264 KRTAP9-2Q9BYQ4 174 aa10.76□□□□□ -0.69
UBFD1-208ENST00000567264 CCDC179H3BU77 68 aa10.73□□□□□ -0.69
UBFD1-208ENST00000567264 CYSTM1Q9H1C7 97 aa10.72□□□□□ -0.69
UBFD1-208ENST00000567264 H7BZZ5 65 aa10.71□□□□□ -0.69
UBFD1-208ENST00000567264 KRTAP10-10P60014 251 aa10.69□□□□□ -0.7
UBFD1-208ENST00000567264 MT1FP04733 61 aa10.68□□□□□ -0.7
UBFD1-208ENST00000567264 CHKB-CPT1BH3BT56 60 aa10.63□□□□□ -0.71
UBFD1-208ENST00000567264 LCE2DQ5TA82 110 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-208ENST00000567264 SPTSSBQ8NFR3 76 aa10.57□□□□□ -0.72
UBFD1-208ENST00000567264 H0YAA0 97 aa10.5□□□□□ -0.73
UBFD1-208ENST00000567264 COA5Q86WW8 74 aa10.5□□□□□ -0.73
UBFD1-208ENST00000567264 KRTAP9-3Q9BYQ3 159 aa10.47□□□□□ -0.73
UBFD1-208ENST00000567264 KRTAP9-6A0A140TA67 174 aa10.45□□□□□ -0.74
UBFD1-208ENST00000567264 ATP5EP56381 51 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-208ENST00000567264 ADM2Q7Z4H4 148 aa10.43□□□□□ -0.74
UBFD1-208ENST00000567264 TMEM258P61165 79 aa10.38□□□□□ -0.75
UBFD1-208ENST00000567264 CRIPTQ9P021 101 aa10.32□□□□□ -0.76
UBFD1-208ENST00000567264 LCE2BO14633 110 aa10.29□□□□□ -0.76
UBFD1-208ENST00000567264 P0C880 135 aa10.25□□□□□ -0.77
UBFD1-208ENST00000567264 PCP4P48539 62 aa10.25□□□□□ -0.77
UBFD1-208ENST00000567264 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
UBFD1-208ENST00000567264 KRTAP19-1Q8IUB9 90 aa10.23□□□□□ -0.77
UBFD1-208ENST00000567264 SPRR2GQ9BYE4 73 aa10.22□□□□□ -0.77
UBFD1-208ENST00000567264 CRCT1Q9UGL9 99 aa10.15□□□□□ -0.78
UBFD1-208ENST00000567264 FSIP2Q5CZC0 6907 aa10.14□□□□□ -0.79
UBFD1-208ENST00000567264 R4GN34 69 aa10.14□□□□□ -0.79
UBFD1-208ENST00000567264 USH2AO75445 5202 aa10.13□□□□□ -0.79
UBFD1-208ENST00000567264 SEC61GP60059 68 aa10.12□□□□□ -0.79
UBFD1-208ENST00000567264 SERP1Q9Y6X1 66 aa10.09□□□□□ -0.79
UBFD1-208ENST00000567264 M0QZ58 72 aa10.08□□□□□ -0.8
UBFD1-208ENST00000567264 KRTAP19-8Q3LI54 63 aa10.05□□□□□ -0.8
UBFD1-208ENST00000567264 Q5VV11 94 aa10.04□□□□□ -0.8
UBFD1-208ENST00000567264 A0A1B0GU69 56 aa9.97□□□□□ -0.81
UBFD1-208ENST00000567264 MT1BP07438 61 aa9.96□□□□□ -0.82
UBFD1-208ENST00000567264 SSPOA2VEC9 5147 aa9.92□□□□□ -0.82
UBFD1-208ENST00000567264 LINC01554Q52M75 96 aa9.91□□□□□ -0.82
UBFD1-208ENST00000567264 PRR15LQ9BU68 103 aa9.87□□□□□ -0.83
UBFD1-208ENST00000567264 LINC01558Q9Y6Z2 57 aa9.87□□□□□ -0.83
UBFD1-208ENST00000567264 A0A1B0GU33 70 aa9.85□□□□□ -0.83
UBFD1-208ENST00000567264 KRTAP19-6Q3LI70 58 aa9.84□□□□□ -0.83
UBFD1-208ENST00000567264 KRTAP13-4Q3LI77 160 aa9.81□□□□□ -0.84
UBFD1-208ENST00000567264 PLAC4Q8WY50 150 aa9.8□□□□□ -0.84
UBFD1-208ENST00000567264 V9GYY9 64 aa9.72□□□□□ -0.85
UBFD1-208ENST00000567264 RPS28P62857 69 aaKnown RBP9.71□□□□□ -0.86
UBFD1-208ENST00000567264 SPATA8Q6RVD6 105 aa9.71□□□□□ -0.86
UBFD1-208ENST00000567264 SMIM26A0A096LP01 95 aa9.7□□□□□ -0.86
UBFD1-208ENST00000567264 A6NN06 94 aa9.68□□□□□ -0.86
UBFD1-208ENST00000567264 Q1T7F1 81 aa9.64□□□□□ -0.87
UBFD1-208ENST00000567264 A0A0D9SG42 100 aa9.63□□□□□ -0.87
UBFD1-208ENST00000567264 KRTAP10-5P60370 271 aa9.62□□□□□ -0.87
UBFD1-208ENST00000567264 FCGBPQ9Y6R7 5405 aaPredicted RBP9.61□□□□□ -0.87
UBFD1-208ENST00000567264 PRO2289Q9P1D8 64 aa9.55□□□□□ -0.88
UBFD1-208ENST00000567264 PSPHP1O15172 72 aa9.54□□□□□ -0.88
UBFD1-208ENST00000567264 UQCR11O14957 56 aa9.53□□□□□ -0.88
UBFD1-208ENST00000567264 MT1XP80297 61 aa9.49□□□□□ -0.89
UBFD1-208ENST00000567264 A8MU10 97 aa9.48□□□□□ -0.89
UBFD1-208ENST00000567264 SPINT4Q6UDR6 99 aa9.47□□□□□ -0.89
UBFD1-208ENST00000567264 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.43□□□□□ -0.9
UBFD1-208ENST00000567264 CAMK2N1Q7Z7J9 78 aa9.43□□□□□ -0.9
UBFD1-208ENST00000567264 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
UBFD1-208ENST00000567264 KRTAP9-7A8MTY7 169 aa9.39□□□□□ -0.91
UBFD1-208ENST00000567264 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
UBFD1-208ENST00000567264 KRTAP12-2P59991 146 aa9.36□□□□□ -0.91
UBFD1-208ENST00000567264 A6NED7 52 aa9.28□□□□□ -0.92
UBFD1-208ENST00000567264 MACF1Q9UPN3 7388 aaKnown RBP9.24□□□□□ -0.93
UBFD1-208ENST00000567264 K7ERS5 55 aa9.12□□□□□ -0.95
UBFD1-208ENST00000567264 KRTAP10-7P60409 375 aaPredicted RBP9.07□□□□□ -0.96
UBFD1-208ENST00000567264 KRTAP10-12P60413 245 aa9.02□□□□□ -0.97
UBFD1-208ENST00000567264 SYNE2Q8WXH0 6885 aaKnown RBP9□□□□□ -0.97
UBFD1-208ENST00000567264 CDC42SE1Q9NRR8 79 aa8.98□□□□□ -0.97
UBFD1-208ENST00000567264 KRTAP6-3Q3LI67 103 aa8.96□□□□□ -0.98
UBFD1-208ENST00000567264 C10orf95Q9H7T3 257 aa8.95□□□□□ -0.98
UBFD1-208ENST00000567264 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
UBFD1-208ENST00000567264 KRTAP8-1Q8IUC2 63 aa8.88□□□□□ -0.99
UBFD1-208ENST00000567264 KRTAP4-8Q9BYQ9 185 aa8.88□□□□□ -0.99
UBFD1-208ENST00000567264 KMT2DO14686 5537 aa8.87□□□□□ -0.99
UBFD1-208ENST00000567264 TNP1P09430 55 aa8.85□□□□□ -0.99
UBFD1-208ENST00000567264 KRTAP5-9P26371 169 aa8.78□□□□□ -1
UBFD1-208ENST00000567264 SPRR2FQ96RM1 72 aa8.71□□□□□ -1.02
UBFD1-208ENST00000567264 BRK1Q8WUW1 75 aa8.67□□□□□ -1.02
UBFD1-208ENST00000567264 KRTAP25-1Q3LHN0 102 aa8.65□□□□□ -1.02
UBFD1-208ENST00000567264 ROMO1P60602 79 aa8.59□□□□□ -1.03
UBFD1-208ENST00000567264 LCE3AQ5TA76 89 aa8.56□□□□□ -1.04
UBFD1-208ENST00000567264 MUC12Q9UKN1 5478 aa8.54□□□□□ -1.04
UBFD1-208ENST00000567264 KRTAP19-7Q3SYF9 63 aa8.47□□□□□ -1.05
UBFD1-208ENST00000567264 SPRR2EP22531 72 aa8.44□□□□□ -1.06
UBFD1-208ENST00000567264 SPRR2BP35325 72 aa8.44□□□□□ -1.06
UBFD1-208ENST00000567264 SPRR2AP35326 72 aa8.44□□□□□ -1.06
UBFD1-208ENST00000567264 KRTAP19-5Q3LI72 72 aa8.44□□□□□ -1.06
UBFD1-208ENST00000567264 NEBP20929 6669 aa8.44□□□□□ -1.06
UBFD1-208ENST00000567264 MT1EP04732 61 aa8.38□□□□□ -1.07
UBFD1-208ENST00000567264 LCE1AQ5T7P2 110 aa8.38□□□□□ -1.07
UBFD1-208ENST00000567264 MDN1Q9NU22 5596 aa8.38□□□□□ -1.07
UBFD1-208ENST00000567264 KRTAP23-1A1A580 65 aa8.33□□□□□ -1.08
UBFD1-208ENST00000567264 KRTAP20-1Q3LI63 56 aa8.26□□□□□ -1.09
UBFD1-208ENST00000567264 KRTAP12-3P60328 96 aa8.25□□□□□ -1.09
UBFD1-208ENST00000567264 PP632Q6XCG6 107 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms