RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 CSAG1Q6PB30 78 aa9.69□□□□□ -0.86
RNF40-210ENST00000566811 MT2AP02795 61 aa9.68□□□□□ -0.86
RNF40-210ENST00000566811 DMAC1Q96GE9 116 aa9.65□□□□□ -0.86
RNF40-210ENST00000566811 C20orf197Q8N268 126 aa9.63□□□□□ -0.87
RNF40-210ENST00000566811 SNURFQ9Y675 71 aa9.6□□□□□ -0.87
RNF40-210ENST00000566811 SSPOA2VEC9 5147 aa9.59□□□□□ -0.87
RNF40-210ENST00000566811 NDUFC1O43677 76 aa9.59□□□□□ -0.87
RNF40-210ENST00000566811 COX7CP15954 63 aa9.59□□□□□ -0.87
RNF40-210ENST00000566811 KRTAP10-10P60014 251 aa9.59□□□□□ -0.87
RNF40-210ENST00000566811 MT1FP04733 61 aa9.58□□□□□ -0.88
RNF40-210ENST00000566811 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
RNF40-210ENST00000566811 USH2AO75445 5202 aa9.56□□□□□ -0.88
RNF40-210ENST00000566811 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
RNF40-210ENST00000566811 ACYP2P14621 99 aa9.51□□□□□ -0.89
RNF40-210ENST00000566811 ANAPC13Q9BS18 74 aa9.48□□□□□ -0.89
RNF40-210ENST00000566811 FCGBPQ9Y6R7 5405 aaPredicted RBP9.45□□□□□ -0.9
RNF40-210ENST00000566811 H0YAA0 97 aa9.45□□□□□ -0.9
RNF40-210ENST00000566811 KRTAP9-3Q9BYQ3 159 aa9.44□□□□□ -0.9
RNF40-210ENST00000566811 SPTSSBQ8NFR3 76 aa9.38□□□□□ -0.91
RNF40-210ENST00000566811 KRTAP19-1Q8IUB9 90 aa9.35□□□□□ -0.91
RNF40-210ENST00000566811 CHKB-CPT1BH3BT56 60 aa9.33□□□□□ -0.92
RNF40-210ENST00000566811 H7BZZ5 65 aa9.32□□□□□ -0.92
RNF40-210ENST00000566811 LCE2BO14633 110 aa9.31□□□□□ -0.92
RNF40-210ENST00000566811 CRIPTQ9P021 101 aa9.31□□□□□ -0.92
RNF40-210ENST00000566811 ADM2Q7Z4H4 148 aa9.23□□□□□ -0.93
RNF40-210ENST00000566811 CYSTM1Q9H1C7 97 aa9.23□□□□□ -0.93
RNF40-210ENST00000566811 MACF1Q9UPN3 7388 aaKnown RBP9.21□□□□□ -0.93
RNF40-210ENST00000566811 SPRR2GQ9BYE4 73 aa9.2□□□□□ -0.94
RNF40-210ENST00000566811 CCDC179H3BU77 68 aa9.19□□□□□ -0.94
RNF40-210ENST00000566811 SYNE2Q8WXH0 6885 aaKnown RBP9.17□□□□□ -0.94
RNF40-210ENST00000566811 COA5Q86WW8 74 aa9.17□□□□□ -0.94
RNF40-210ENST00000566811 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.94
RNF40-210ENST00000566811 KRTAP19-8Q3LI54 63 aa9.05□□□□□ -0.96
RNF40-210ENST00000566811 P0C880 135 aa9.04□□□□□ -0.96
RNF40-210ENST00000566811 KRTAP19-6Q3LI70 58 aa9.04□□□□□ -0.96
RNF40-210ENST00000566811 Q5VV11 94 aa9.04□□□□□ -0.96
RNF40-210ENST00000566811 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
RNF40-210ENST00000566811 R4GN34 69 aa9.04□□□□□ -0.96
RNF40-210ENST00000566811 TMEM258P61165 79 aa9.03□□□□□ -0.96
RNF40-210ENST00000566811 M0QZ58 72 aa8.94□□□□□ -0.98
RNF40-210ENST00000566811 SEC61GP60059 68 aa8.93□□□□□ -0.98
RNF40-210ENST00000566811 KRTAP6-3Q3LI67 103 aa8.93□□□□□ -0.98
RNF40-210ENST00000566811 MT1BP07438 61 aa8.92□□□□□ -0.98
RNF40-210ENST00000566811 SERP1Q9Y6X1 66 aa8.87□□□□□ -0.99
RNF40-210ENST00000566811 PLAC4Q8WY50 150 aa8.76□□□□□ -1.01
RNF40-210ENST00000566811 A0A1B0GU69 56 aa8.73□□□□□ -1.01
RNF40-210ENST00000566811 LINC01554Q52M75 96 aa8.73□□□□□ -1.01
RNF40-210ENST00000566811 A6NN06 94 aa8.72□□□□□ -1.01
RNF40-210ENST00000566811 NEBP20929 6669 aa8.7□□□□□ -1.02
RNF40-210ENST00000566811 KRTAP10-5P60370 271 aa8.68□□□□□ -1.02
RNF40-210ENST00000566811 PRR15LQ9BU68 103 aa8.68□□□□□ -1.02
RNF40-210ENST00000566811 A0A1B0GU33 70 aa8.66□□□□□ -1.02
RNF40-210ENST00000566811 PCP4P48539 62 aa8.66□□□□□ -1.02
RNF40-210ENST00000566811 PRO2289Q9P1D8 64 aa8.65□□□□□ -1.02
RNF40-210ENST00000566811 LINC01558Q9Y6Z2 57 aa8.62□□□□□ -1.03
RNF40-210ENST00000566811 KRTAP13-4Q3LI77 160 aa8.61□□□□□ -1.03
RNF40-210ENST00000566811 MUC12Q9UKN1 5478 aa8.57□□□□□ -1.04
RNF40-210ENST00000566811 KRTAP20-1Q3LI63 56 aa8.5□□□□□ -1.05
RNF40-210ENST00000566811 V9GYY9 64 aa8.5□□□□□ -1.05
RNF40-210ENST00000566811 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
RNF40-210ENST00000566811 MT1XP80297 61 aa8.48□□□□□ -1.05
RNF40-210ENST00000566811 SPATA8Q6RVD6 105 aa8.48□□□□□ -1.05
RNF40-210ENST00000566811 A0A0D9SG42 100 aa8.41□□□□□ -1.06
RNF40-210ENST00000566811 Q1T7F1 81 aa8.39□□□□□ -1.07
RNF40-210ENST00000566811 RPS28P62857 69 aaKnown RBP8.38□□□□□ -1.07
RNF40-210ENST00000566811 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
RNF40-210ENST00000566811 UQCR11O14957 56 aa8.36□□□□□ -1.07
RNF40-210ENST00000566811 KRTAP5-9P26371 169 aa8.3□□□□□ -1.08
RNF40-210ENST00000566811 KRTAP12-2P59991 146 aa8.3□□□□□ -1.08
RNF40-210ENST00000566811 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
RNF40-210ENST00000566811 KRTAP12-1P59990 96 aa8.29□□□□□ -1.08
RNF40-210ENST00000566811 KMT2DO14686 5537 aa8.25□□□□□ -1.09
RNF40-210ENST00000566811 MDN1Q9NU22 5596 aa8.24□□□□□ -1.09
RNF40-210ENST00000566811 A8MU10 97 aa8.24□□□□□ -1.09
RNF40-210ENST00000566811 PSPHP1O15172 72 aa8.21□□□□□ -1.1
RNF40-210ENST00000566811 MIR22HGQ0VDD5 57 aa8.17□□□□□ -1.1
RNF40-210ENST00000566811 KRTAP2-3P0C7H8 128 aa8.15□□□□□ -1.1
RNF40-210ENST00000566811 KRTAP2-4Q9BYR9 128 aa8.15□□□□□ -1.1
RNF40-210ENST00000566811 KRTAP10-12P60413 245 aa8.11□□□□□ -1.11
RNF40-210ENST00000566811 KRTAP10-7P60409 375 aaPredicted RBP8.08□□□□□ -1.12
RNF40-210ENST00000566811 A6NED7 52 aa8.03□□□□□ -1.12
RNF40-210ENST00000566811 K7ERS5 55 aa8.03□□□□□ -1.12
RNF40-210ENST00000566811 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
RNF40-210ENST00000566811 SPRR2EP22531 72 aa7.94□□□□□ -1.14
RNF40-210ENST00000566811 SPRR2BP35325 72 aa7.94□□□□□ -1.14
RNF40-210ENST00000566811 SPRR2AP35326 72 aa7.94□□□□□ -1.14
RNF40-210ENST00000566811 SPRR2FQ96RM1 72 aa7.93□□□□□ -1.14
RNF40-210ENST00000566811 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
RNF40-210ENST00000566811 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
RNF40-210ENST00000566811 TNP1P09430 55 aa7.86□□□□□ -1.15
RNF40-210ENST00000566811 KRTAP2-2Q9BYT5 123 aa7.86□□□□□ -1.15
RNF40-210ENST00000566811 KRTAP2-1Q9BYU5 128 aa7.86□□□□□ -1.15
RNF40-210ENST00000566811 C10orf95Q9H7T3 257 aa7.85□□□□□ -1.15
RNF40-210ENST00000566811 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
RNF40-210ENST00000566811 LCE1AQ5T7P2 110 aa7.79□□□□□ -1.16
RNF40-210ENST00000566811 SPRR2DP22532 72 aa7.68□□□□□ -1.18
RNF40-210ENST00000566811 KRTAP25-1Q3LHN0 102 aa7.67□□□□□ -1.18
RNF40-210ENST00000566811 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
RNF40-210ENST00000566811 LCE3AQ5TA76 89 aa7.56□□□□□ -1.2
RNF40-210ENST00000566811 MT1EP04732 61 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms