RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 TRAV7A0A075B6U4 112 aa4.53□□□□□ -1.68
SMPD3-207ENST00000566466 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
SMPD3-207ENST00000566466 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
SMPD3-207ENST00000566466 ATOX1O00244 68 aa4.52□□□□□ -1.69
SMPD3-207ENST00000566466 SCGB1A1P11684 91 aa4.52□□□□□ -1.69
SMPD3-207ENST00000566466 C5orf47Q569G3 176 aa4.52□□□□□ -1.69
SMPD3-207ENST00000566466 LINC00208Q96KT6 92 aa4.52□□□□□ -1.69
SMPD3-207ENST00000566466 RBM12B-AS1Q9P1G2 102 aa4.52□□□□□ -1.69
SMPD3-207ENST00000566466 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
SMPD3-207ENST00000566466 C1orf64Q8NEQ6 169 aa4.51□□□□□ -1.69
SMPD3-207ENST00000566466 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
SMPD3-207ENST00000566466 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
SMPD3-207ENST00000566466 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
SMPD3-207ENST00000566466 FAM236DA0A1B0GTK5 79 aa4.48□□□□□ -1.69
SMPD3-207ENST00000566466 H3BPC8 53 aa4.48□□□□□ -1.69
SMPD3-207ENST00000566466 FAM236CP0DP71 79 aa4.48□□□□□ -1.69
SMPD3-207ENST00000566466 SMIM20Q8N5G0 67 aa4.48□□□□□ -1.69
SMPD3-207ENST00000566466 MP68P56378 58 aa4.47□□□□□ -1.69
SMPD3-207ENST00000566466 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
SMPD3-207ENST00000566466 SERP2Q8N6R1 65 aa4.47□□□□□ -1.69
SMPD3-207ENST00000566466 CYSTM1Q9H1C7 97 aa4.43□□□□□ -1.7
SMPD3-207ENST00000566466 SNURFQ9Y675 71 aa4.43□□□□□ -1.7
SMPD3-207ENST00000566466 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
SMPD3-207ENST00000566466 M0R2T5 61 aa4.41□□□□□ -1.7
SMPD3-207ENST00000566466 MT2AP02795 61 aa4.41□□□□□ -1.7
SMPD3-207ENST00000566466 COX7CP15954 63 aa4.41□□□□□ -1.7
SMPD3-207ENST00000566466 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
SMPD3-207ENST00000566466 C20orf197Q8N268 126 aa4.41□□□□□ -1.7
SMPD3-207ENST00000566466 LCA10Q71F78 164 aa4.4□□□□□ -1.71
SMPD3-207ENST00000566466 MT1FP04733 61 aa4.39□□□□□ -1.71
SMPD3-207ENST00000566466 DMAC1Q96GE9 116 aa4.39□□□□□ -1.71
SMPD3-207ENST00000566466 A8MUN3 132 aa4.36□□□□□ -1.71
SMPD3-207ENST00000566466 S4R3F8 94 aa4.36□□□□□ -1.71
SMPD3-207ENST00000566466 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
SMPD3-207ENST00000566466 H7BZZ5 65 aa4.34□□□□□ -1.71
SMPD3-207ENST00000566466 ANAPC13Q9BS18 74 aa4.34□□□□□ -1.71
SMPD3-207ENST00000566466 SPANXA2-OT1Q8N9U9 137 aa4.32□□□□□ -1.72
SMPD3-207ENST00000566466 USH2AO75445 5202 aa4.27□□□□□ -1.73
SMPD3-207ENST00000566466 CSAG1Q6PB30 78 aa4.27□□□□□ -1.73
SMPD3-207ENST00000566466 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
SMPD3-207ENST00000566466 NDUFC1O43677 76 aa4.24□□□□□ -1.73
SMPD3-207ENST00000566466 ACYP2P14621 99 aa4.23□□□□□ -1.73
SMPD3-207ENST00000566466 H0YAA0 97 aa4.22□□□□□ -1.73
SMPD3-207ENST00000566466 COA5Q86WW8 74 aa4.19□□□□□ -1.74
SMPD3-207ENST00000566466 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
SMPD3-207ENST00000566466 P0C880 135 aa4.17□□□□□ -1.74
SMPD3-207ENST00000566466 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
SMPD3-207ENST00000566466 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.75
SMPD3-207ENST00000566466 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
SMPD3-207ENST00000566466 CHKB-CPT1BH3BT56 60 aa4.12□□□□□ -1.75
SMPD3-207ENST00000566466 MT1BP07438 61 aa4.12□□□□□ -1.75
SMPD3-207ENST00000566466 TMEM258P61165 79 aa4.12□□□□□ -1.75
SMPD3-207ENST00000566466 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
SMPD3-207ENST00000566466 ATP5EP56381 51 aaPredicted RBP4.1□□□□□ -1.75
SMPD3-207ENST00000566466 CRIPTQ9P021 101 aa4.07□□□□□ -1.76
SMPD3-207ENST00000566466 SPTSSBQ8NFR3 76 aa4.06□□□□□ -1.76
SMPD3-207ENST00000566466 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
SMPD3-207ENST00000566466 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
SMPD3-207ENST00000566466 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
SMPD3-207ENST00000566466 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
SMPD3-207ENST00000566466 M0QZ58 72 aa3.99□□□□□ -1.77
SMPD3-207ENST00000566466 SERP1Q9Y6X1 66 aa3.99□□□□□ -1.77
SMPD3-207ENST00000566466 Q5VV11 94 aa3.98□□□□□ -1.77
SMPD3-207ENST00000566466 R4GN34 69 aa3.97□□□□□ -1.77
SMPD3-207ENST00000566466 LINC01558Q9Y6Z2 57 aa3.95□□□□□ -1.78
SMPD3-207ENST00000566466 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
SMPD3-207ENST00000566466 MT1XP80297 61 aa3.91□□□□□ -1.78
SMPD3-207ENST00000566466 A0A1B0GU69 56 aa3.9□□□□□ -1.79
SMPD3-207ENST00000566466 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.79
SMPD3-207ENST00000566466 A0A1B0GU33 70 aa3.89□□□□□ -1.79
SMPD3-207ENST00000566466 LINC01554Q52M75 96 aa3.89□□□□□ -1.79
SMPD3-207ENST00000566466 A6NN06 94 aa3.88□□□□□ -1.79
SMPD3-207ENST00000566466 SEC61GP60059 68 aa3.87□□□□□ -1.79
SMPD3-207ENST00000566466 RPS28P62857 69 aaKnown RBP3.87□□□□□ -1.79
SMPD3-207ENST00000566466 Q1T7F1 81 aa3.85□□□□□ -1.79
SMPD3-207ENST00000566466 A8MU10 97 aa3.83□□□□□ -1.8
SMPD3-207ENST00000566466 SMIM26A0A096LP01 95 aa3.82□□□□□ -1.8
SMPD3-207ENST00000566466 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
SMPD3-207ENST00000566466 PRR15LQ9BU68 103 aa3.82□□□□□ -1.8
SMPD3-207ENST00000566466 A0A0D9SG42 100 aa3.81□□□□□ -1.8
SMPD3-207ENST00000566466 KRTAP12-2P59991 146 aa3.8□□□□□ -1.8
SMPD3-207ENST00000566466 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
SMPD3-207ENST00000566466 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
SMPD3-207ENST00000566466 PSPHP1O15172 72 aa3.78□□□□□ -1.8
SMPD3-207ENST00000566466 V9GYY9 64 aa3.76□□□□□ -1.81
SMPD3-207ENST00000566466 UQCR11O14957 56 aa3.73□□□□□ -1.81
SMPD3-207ENST00000566466 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
SMPD3-207ENST00000566466 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
SMPD3-207ENST00000566466 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
SMPD3-207ENST00000566466 KMT2DO14686 5537 aa3.72□□□□□ -1.81
SMPD3-207ENST00000566466 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
SMPD3-207ENST00000566466 SPINT4Q6UDR6 99 aa3.7□□□□□ -1.82
SMPD3-207ENST00000566466 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
SMPD3-207ENST00000566466 MIR22HGQ0VDD5 57 aa3.69□□□□□ -1.82
SMPD3-207ENST00000566466 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
SMPD3-207ENST00000566466 CAMK2N1Q7Z7J9 78 aa3.65□□□□□ -1.83
SMPD3-207ENST00000566466 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
SMPD3-207ENST00000566466 KRTAP6-3Q3LI67 103 aa3.62□□□□□ -1.83
SMPD3-207ENST00000566466 A6NED7 52 aa3.61□□□□□ -1.83
SMPD3-207ENST00000566466 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms