RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-231ENST00000566279 PRR15LQ9BU68 103 aa5.5□□□□□ -1.53
TCF4-231ENST00000566279 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
TCF4-231ENST00000566279 LRP2P98164 4655 aa5.5□□□□□ -1.53
TCF4-231ENST00000566279 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
TCF4-231ENST00000566279 A6NED7 52 aa5.47□□□□□ -1.53
TCF4-231ENST00000566279 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
TCF4-231ENST00000566279 ACYP2P14621 99 aa5.44□□□□□ -1.54
TCF4-231ENST00000566279 LINC01558Q9Y6Z2 57 aa5.42□□□□□ -1.54
TCF4-231ENST00000566279 TPRXLQ17RH7 258 aa5.41□□□□□ -1.54
TCF4-231ENST00000566279 H3BS24 57 aa5.37□□□□□ -1.55
TCF4-231ENST00000566279 SPINK7P58062 85 aa5.36□□□□□ -1.55
TCF4-231ENST00000566279 RNF213Q63HN8 5207 aa5.35□□□□□ -1.55
TCF4-231ENST00000566279 XP32Q5T750 250 aa5.35□□□□□ -1.55
TCF4-231ENST00000566279 RPL37P61927 97 aaKnown RBP5.34□□□□□ -1.55
TCF4-231ENST00000566279 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
TCF4-231ENST00000566279 MUC2Q02817 5179 aa5.3□□□□□ -1.56
TCF4-231ENST00000566279 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
TCF4-231ENST00000566279 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
TCF4-231ENST00000566279 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
TCF4-231ENST00000566279 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
TCF4-231ENST00000566279 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
TCF4-231ENST00000566279 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.57
TCF4-231ENST00000566279 ADM2Q7Z4H4 148 aa5.21□□□□□ -1.57
TCF4-231ENST00000566279 A0A1B0GU69 56 aa5.21□□□□□ -1.58
TCF4-231ENST00000566279 KRTAP9-6A0A140TA67 174 aa5.19□□□□□ -1.58
TCF4-231ENST00000566279 SPATA8Q6RVD6 105 aa5.17□□□□□ -1.58
TCF4-231ENST00000566279 LCE2BO14633 110 aa5.1□□□□□ -1.59
TCF4-231ENST00000566279 CSAG1Q6PB30 78 aa5.09□□□□□ -1.59
TCF4-231ENST00000566279 UQCR11O14957 56 aa5.08□□□□□ -1.6
TCF4-231ENST00000566279 S4R3F8 94 aa5.08□□□□□ -1.6
TCF4-231ENST00000566279 FAT4Q6V0I7 4981 aa5.07□□□□□ -1.6
TCF4-231ENST00000566279 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
TCF4-231ENST00000566279 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
TCF4-231ENST00000566279 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
TCF4-231ENST00000566279 LCE2CQ5TA81 110 aa5.02□□□□□ -1.61
TCF4-231ENST00000566279 A0A1B0GU33 70 aa5□□□□□ -1.61
TCF4-231ENST00000566279 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
TCF4-231ENST00000566279 H0YAA0 97 aa4.99□□□□□ -1.61
TCF4-231ENST00000566279 ROMO1P60602 79 aa4.98□□□□□ -1.61
TCF4-231ENST00000566279 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
TCF4-231ENST00000566279 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
TCF4-231ENST00000566279 MT1HP80294 61 aa4.95□□□□□ -1.62
TCF4-231ENST00000566279 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
TCF4-231ENST00000566279 A0A0A0MQY5 61 aa4.93□□□□□ -1.62
TCF4-231ENST00000566279 P0C880 135 aa4.9□□□□□ -1.62
TCF4-231ENST00000566279 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.62
TCF4-231ENST00000566279 KRTAP13-4Q3LI77 160 aa4.88□□□□□ -1.63
TCF4-231ENST00000566279 M0R2T5 61 aa4.87□□□□□ -1.63
TCF4-231ENST00000566279 LORP23490 312 aaPredicted RBP4.79□□□□□ -1.64
TCF4-231ENST00000566279 A0A0D9SG42 100 aa4.78□□□□□ -1.64
TCF4-231ENST00000566279 K7ERS5 55 aa4.75□□□□□ -1.65
TCF4-231ENST00000566279 M0QZ58 72 aa4.75□□□□□ -1.65
TCF4-231ENST00000566279 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
TCF4-231ENST00000566279 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
TCF4-231ENST00000566279 KRTAP12-1P59990 96 aa4.68□□□□□ -1.66
TCF4-231ENST00000566279 MT2AP02795 61 aa4.67□□□□□ -1.66
TCF4-231ENST00000566279 R4GN34 69 aa4.67□□□□□ -1.66
TCF4-231ENST00000566279 MT1FP04733 61 aa4.66□□□□□ -1.66
TCF4-231ENST00000566279 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
TCF4-231ENST00000566279 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
TCF4-231ENST00000566279 CRIPTQ9P021 101 aa4.63□□□□□ -1.67
TCF4-231ENST00000566279 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
TCF4-231ENST00000566279 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
TCF4-231ENST00000566279 FSIP2Q5CZC0 6907 aa4.6□□□□□ -1.67
TCF4-231ENST00000566279 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
TCF4-231ENST00000566279 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
TCF4-231ENST00000566279 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
TCF4-231ENST00000566279 USH2AO75445 5202 aa4.46□□□□□ -1.69
TCF4-231ENST00000566279 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
TCF4-231ENST00000566279 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
TCF4-231ENST00000566279 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
TCF4-231ENST00000566279 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
TCF4-231ENST00000566279 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
TCF4-231ENST00000566279 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
TCF4-231ENST00000566279 SSPOA2VEC9 5147 aa4.38□□□□□ -1.71
TCF4-231ENST00000566279 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
TCF4-231ENST00000566279 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
TCF4-231ENST00000566279 MT1BP07438 61 aa4.32□□□□□ -1.72
TCF4-231ENST00000566279 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
TCF4-231ENST00000566279 PLAC4Q8WY50 150 aa4.3□□□□□ -1.72
TCF4-231ENST00000566279 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
TCF4-231ENST00000566279 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
TCF4-231ENST00000566279 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
TCF4-231ENST00000566279 TNP1P09430 55 aa4.21□□□□□ -1.74
TCF4-231ENST00000566279 PP632Q6XCG6 107 aa4.19□□□□□ -1.74
TCF4-231ENST00000566279 MT1XP80297 61 aa4.15□□□□□ -1.75
TCF4-231ENST00000566279 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
TCF4-231ENST00000566279 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
TCF4-231ENST00000566279 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
TCF4-231ENST00000566279 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
TCF4-231ENST00000566279 PRO2289Q9P1D8 64 aa4.02□□□□□ -1.77
TCF4-231ENST00000566279 KRTAP4-8Q9BYQ9 185 aa4.01□□□□□ -1.77
TCF4-231ENST00000566279 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
TCF4-231ENST00000566279 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
TCF4-231ENST00000566279 KMT2DO14686 5537 aa3.97□□□□□ -1.77
TCF4-231ENST00000566279 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
TCF4-231ENST00000566279 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
TCF4-231ENST00000566279 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
TCF4-231ENST00000566279 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
TCF4-231ENST00000566279 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms