RNA–Protein interactions for RNA: ENST00000565982.1

TM6SF1-208, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 3

Gene TM6SF1, Length 856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-208ENST00000565982 TMEM258P61165 79 aa13.25□□□□□ -0.29
TM6SF1-208ENST00000565982 FLGP20930 4061 aaPredicted RBP13.24□□□□□ -0.29
TM6SF1-208ENST00000565982 LCA10Q71F78 164 aa13.22□□□□□ -0.29
TM6SF1-208ENST00000565982 LCE2AQ5TA79 106 aaPredicted RBP13.21□□□□□ -0.29
TM6SF1-208ENST00000565982 CSAG1Q6PB30 78 aa13.16□□□□□ -0.3
TM6SF1-208ENST00000565982 CHKB-CPT1BH3BT56 60 aa13.15□□□□□ -0.3
TM6SF1-208ENST00000565982 SPTSSBQ8NFR3 76 aa13.1□□□□□ -0.31
TM6SF1-208ENST00000565982 KRTAP3-3Q9BYR6 98 aa13.09□□□□□ -0.31
TM6SF1-208ENST00000565982 COA5Q86WW8 74 aa13.07□□□□□ -0.32
TM6SF1-208ENST00000565982 KRTAP10-6P60371 365 aaPredicted RBP12.96□□□□□ -0.33
TM6SF1-208ENST00000565982 LORP23490 312 aaPredicted RBP12.89□□□□□ -0.35
TM6SF1-208ENST00000565982 SERP1Q9Y6X1 66 aa12.83□□□□□ -0.36
TM6SF1-208ENST00000565982 H0YAA0 97 aa12.82□□□□□ -0.36
TM6SF1-208ENST00000565982 KRTAP9-8Q9BYQ0 159 aa12.78□□□□□ -0.36
TM6SF1-208ENST00000565982 LCE2DQ5TA82 110 aaPredicted RBP12.7□□□□□ -0.38
TM6SF1-208ENST00000565982 MT2AP02795 61 aa12.69□□□□□ -0.38
TM6SF1-208ENST00000565982 ADM2Q7Z4H4 148 aa12.65□□□□□ -0.38
TM6SF1-208ENST00000565982 KRTAP10-10P60014 251 aa12.64□□□□□ -0.39
TM6SF1-208ENST00000565982 SEC61GP60059 68 aa12.59□□□□□ -0.39
TM6SF1-208ENST00000565982 RPS28P62857 69 aaKnown RBP12.59□□□□□ -0.39
TM6SF1-208ENST00000565982 MT1FP04733 61 aa12.58□□□□□ -0.4
TM6SF1-208ENST00000565982 CRIPTQ9P021 101 aa12.5□□□□□ -0.41
TM6SF1-208ENST00000565982 KRTAP3-2Q9BYR7 98 aa12.49□□□□□ -0.41
TM6SF1-208ENST00000565982 P0C880 135 aa12.44□□□□□ -0.42
TM6SF1-208ENST00000565982 SMIM26A0A096LP01 95 aa12.43□□□□□ -0.42
TM6SF1-208ENST00000565982 A0A1B0GU69 56 aa12.43□□□□□ -0.42
TM6SF1-208ENST00000565982 LINC01558Q9Y6Z2 57 aa12.42□□□□□ -0.42
TM6SF1-208ENST00000565982 V9GYY9 64 aa12.41□□□□□ -0.42
TM6SF1-208ENST00000565982 PRR15LQ9BU68 103 aa12.4□□□□□ -0.42
TM6SF1-208ENST00000565982 KRTAP9-3Q9BYQ3 159 aa12.35□□□□□ -0.43
TM6SF1-208ENST00000565982 Q1T7F1 81 aa12.3□□□□□ -0.44
TM6SF1-208ENST00000565982 R4GN34 69 aa12.3□□□□□ -0.44
TM6SF1-208ENST00000565982 SPRR2GQ9BYE4 73 aa12.25□□□□□ -0.45
TM6SF1-208ENST00000565982 M0QZ58 72 aa12.24□□□□□ -0.45
TM6SF1-208ENST00000565982 A0A1B0GU33 70 aa12.21□□□□□ -0.45
TM6SF1-208ENST00000565982 KRTAP19-1Q8IUB9 90 aa12.18□□□□□ -0.46
TM6SF1-208ENST00000565982 Q5VV11 94 aa12.08□□□□□ -0.48
TM6SF1-208ENST00000565982 LCE2BO14633 110 aa12.04□□□□□ -0.48
TM6SF1-208ENST00000565982 PSPHP1O15172 72 aa12.04□□□□□ -0.48
TM6SF1-208ENST00000565982 KRTAP19-8Q3LI54 63 aa12□□□□□ -0.49
TM6SF1-208ENST00000565982 KRTAP9-2Q9BYQ4 174 aa12□□□□□ -0.49
TM6SF1-208ENST00000565982 UQCR11O14957 56 aa11.98□□□□□ -0.49
TM6SF1-208ENST00000565982 KRTAP13-4Q3LI77 160 aa11.97□□□□□ -0.49
TM6SF1-208ENST00000565982 LINC01554Q52M75 96 aa11.96□□□□□ -0.49
TM6SF1-208ENST00000565982 SPATA8Q6RVD6 105 aa11.93□□□□□ -0.5
TM6SF1-208ENST00000565982 A6NN06 94 aa11.85□□□□□ -0.51
TM6SF1-208ENST00000565982 MT1BP07438 61 aa11.8□□□□□ -0.52
TM6SF1-208ENST00000565982 PLAC4Q8WY50 150 aa11.8□□□□□ -0.52
TM6SF1-208ENST00000565982 A0A0D9SG42 100 aa11.77□□□□□ -0.53
TM6SF1-208ENST00000565982 MIR22HGQ0VDD5 57 aa11.77□□□□□ -0.53
TM6SF1-208ENST00000565982 A6NED7 52 aa11.75□□□□□ -0.53
TM6SF1-208ENST00000565982 A8MU10 97 aa11.66□□□□□ -0.54
TM6SF1-208ENST00000565982 USH2AO75445 5202 aa11.65□□□□□ -0.54
TM6SF1-208ENST00000565982 SPINT4Q6UDR6 99 aa11.58□□□□□ -0.56
TM6SF1-208ENST00000565982 KRTAP12-1P59990 96 aa11.57□□□□□ -0.56
TM6SF1-208ENST00000565982 KRTAP19-6Q3LI70 58 aa11.53□□□□□ -0.56
TM6SF1-208ENST00000565982 CRCT1Q9UGL9 99 aa11.53□□□□□ -0.56
TM6SF1-208ENST00000565982 KRTAP12-2P59991 146 aa11.47□□□□□ -0.57
TM6SF1-208ENST00000565982 CAMK2N1Q7Z7J9 78 aa11.47□□□□□ -0.57
TM6SF1-208ENST00000565982 K7ERS5 55 aa11.46□□□□□ -0.57
TM6SF1-208ENST00000565982 CDC42SE1Q9NRR8 79 aa11.46□□□□□ -0.57
TM6SF1-208ENST00000565982 PRO2289Q9P1D8 64 aa11.45□□□□□ -0.58
TM6SF1-208ENST00000565982 FSIP2Q5CZC0 6907 aa11.41□□□□□ -0.58
TM6SF1-208ENST00000565982 KRTAP10-5P60370 271 aa11.39□□□□□ -0.59
TM6SF1-208ENST00000565982 SSPOA2VEC9 5147 aa11.32□□□□□ -0.6
TM6SF1-208ENST00000565982 MT1XP80297 61 aa11.31□□□□□ -0.6
TM6SF1-208ENST00000565982 KRTAP9-6A0A140TA67 174 aa11.3□□□□□ -0.6
TM6SF1-208ENST00000565982 BRK1Q8WUW1 75 aa11.19□□□□□ -0.62
TM6SF1-208ENST00000565982 FCGBPQ9Y6R7 5405 aaPredicted RBP11.02□□□□□ -0.65
TM6SF1-208ENST00000565982 C10orf95Q9H7T3 257 aa10.94□□□□□ -0.66
TM6SF1-208ENST00000565982 TNP1P09430 55 aa10.84□□□□□ -0.67
TM6SF1-208ENST00000565982 KRTAP10-7P60409 375 aaPredicted RBP10.79□□□□□ -0.68
TM6SF1-208ENST00000565982 KRTAP10-12P60413 245 aa10.79□□□□□ -0.68
TM6SF1-208ENST00000565982 ROMO1P60602 79 aa10.78□□□□□ -0.68
TM6SF1-208ENST00000565982 KRTAP25-1Q3LHN0 102 aa10.72□□□□□ -0.69
TM6SF1-208ENST00000565982 PRO0628Q9UI54 55 aa10.71□□□□□ -0.69
TM6SF1-208ENST00000565982 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.67□□□□□ -0.7
TM6SF1-208ENST00000565982 PMAIP1Q13794 54 aa10.6□□□□□ -0.71
TM6SF1-208ENST00000565982 MACF1Q9UPN3 7388 aaKnown RBP10.48□□□□□ -0.73
TM6SF1-208ENST00000565982 KRTAP4-8A0A0G2JLE6 195 aa10.47□□□□□ -0.73
TM6SF1-208ENST00000565982 KRTAP8-1Q8IUC2 63 aa10.47□□□□□ -0.73
TM6SF1-208ENST00000565982 KRTAP4-8Q9BYQ9 185 aa10.47□□□□□ -0.73
TM6SF1-208ENST00000565982 KRTAP23-1A1A580 65 aa10.4□□□□□ -0.74
TM6SF1-208ENST00000565982 LCE3AQ5TA76 89 aa10.35□□□□□ -0.75
TM6SF1-208ENST00000565982 KRTAP6-3Q3LI67 103 aa10.34□□□□□ -0.75
TM6SF1-208ENST00000565982 PP632Q6XCG6 107 aa10.28□□□□□ -0.76
TM6SF1-208ENST00000565982 KRTAP9-7A8MTY7 169 aa10.27□□□□□ -0.77
TM6SF1-208ENST00000565982 KRTAP5-9P26371 169 aa10.25□□□□□ -0.77
TM6SF1-208ENST00000565982 KMT2DO14686 5537 aa10.22□□□□□ -0.77
TM6SF1-208ENST00000565982 SPRR2FQ96RM1 72 aa10.16□□□□□ -0.78
TM6SF1-208ENST00000565982 SYNE2Q8WXH0 6885 aaKnown RBP10.13□□□□□ -0.79
TM6SF1-208ENST00000565982 KRTAP19-5Q3LI72 72 aa10.11□□□□□ -0.79
TM6SF1-208ENST00000565982 KRTAP19-7Q3SYF9 63 aa10.09□□□□□ -0.79
TM6SF1-208ENST00000565982 KRTAP12-3P60328 96 aa10.02□□□□□ -0.81
TM6SF1-208ENST00000565982 KTN1-AS1Q86SY8 53 aa9.99□□□□□ -0.81
TM6SF1-208ENST00000565982 MT1EP04732 61 aa9.97□□□□□ -0.81
TM6SF1-208ENST00000565982 PRAC1Q96KF2 57 aa9.85□□□□□ -0.83
TM6SF1-208ENST00000565982 SPRR2EP22531 72 aa9.79□□□□□ -0.84
TM6SF1-208ENST00000565982 SPRR2BP35325 72 aa9.79□□□□□ -0.84
TM6SF1-208ENST00000565982 SPRR2AP35326 72 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms