RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
CLN6-205ENST00000564846 KRTAP4-1Q9BYQ7 146 aa9.84□□□□□ -0.83
CLN6-205ENST00000564846 PSPHP1O15172 72 aa9.82□□□□□ -0.84
CLN6-205ENST00000564846 PRR15LQ9BU68 103 aa9.81□□□□□ -0.84
CLN6-205ENST00000564846 S4R3F8 94 aa9.78□□□□□ -0.84
CLN6-205ENST00000564846 LCA10Q71F78 164 aa9.76□□□□□ -0.85
CLN6-205ENST00000564846 Q5VV11 94 aa9.73□□□□□ -0.85
CLN6-205ENST00000564846 A0A1B0GU69 56 aa9.72□□□□□ -0.85
CLN6-205ENST00000564846 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
CLN6-205ENST00000564846 SEC61GP60059 68 aa9.66□□□□□ -0.86
CLN6-205ENST00000564846 KRTAP19-2Q3LHN2 52 aa9.61□□□□□ -0.87
CLN6-205ENST00000564846 MUC2Q02817 5179 aa9.59□□□□□ -0.87
CLN6-205ENST00000564846 CSAG1Q6PB30 78 aa9.57□□□□□ -0.88
CLN6-205ENST00000564846 A6NED7 52 aa9.54□□□□□ -0.88
CLN6-205ENST00000564846 UBR4Q5T4S7 5183 aa9.51□□□□□ -0.89
CLN6-205ENST00000564846 BRK1Q8WUW1 75 aa9.49□□□□□ -0.89
CLN6-205ENST00000564846 RNF213Q63HN8 5207 aa9.46□□□□□ -0.9
CLN6-205ENST00000564846 UQCR11O14957 56 aa9.45□□□□□ -0.9
CLN6-205ENST00000564846 A0A1B0GU33 70 aa9.4□□□□□ -0.9
CLN6-205ENST00000564846 KRTAP10-6P60371 365 aaPredicted RBP9.4□□□□□ -0.91
CLN6-205ENST00000564846 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.91
CLN6-205ENST00000564846 FLGP20930 4061 aaPredicted RBP9.39□□□□□ -0.91
CLN6-205ENST00000564846 CDC42SE1Q9NRR8 79 aa9.39□□□□□ -0.91
CLN6-205ENST00000564846 H0YAA0 97 aa9.38□□□□□ -0.91
CLN6-205ENST00000564846 ADM2Q7Z4H4 148 aa9.36□□□□□ -0.91
CLN6-205ENST00000564846 LCE2CQ5TA81 110 aa9.35□□□□□ -0.91
CLN6-205ENST00000564846 MIR22HGQ0VDD5 57 aa9.34□□□□□ -0.91
CLN6-205ENST00000564846 PRO0628Q9UI54 55 aa9.34□□□□□ -0.91
CLN6-205ENST00000564846 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
CLN6-205ENST00000564846 P0C880 135 aa9.3□□□□□ -0.92
CLN6-205ENST00000564846 A8MU10 97 aa9.29□□□□□ -0.92
CLN6-205ENST00000564846 MT1HP80294 61 aa9.17□□□□□ -0.94
CLN6-205ENST00000564846 FAT4Q6V0I7 4981 aa9.16□□□□□ -0.94
CLN6-205ENST00000564846 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
CLN6-205ENST00000564846 M0QZ58 72 aa9.12□□□□□ -0.95
CLN6-205ENST00000564846 M0R2T5 61 aa9.11□□□□□ -0.95
CLN6-205ENST00000564846 R4GN34 69 aa9.04□□□□□ -0.96
CLN6-205ENST00000564846 LORP23490 312 aaPredicted RBP8.99□□□□□ -0.97
CLN6-205ENST00000564846 A0A0D9SG42 100 aa8.99□□□□□ -0.97
CLN6-205ENST00000564846 PMAIP1Q13794 54 aa8.99□□□□□ -0.97
CLN6-205ENST00000564846 CRIPTQ9P021 101 aa8.95□□□□□ -0.98
CLN6-205ENST00000564846 K7ERS5 55 aa8.93□□□□□ -0.98
CLN6-205ENST00000564846 A6NN06 94 aa8.91□□□□□ -0.98
CLN6-205ENST00000564846 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
CLN6-205ENST00000564846 KRTAP9-8Q9BYQ0 159 aa8.84□□□□□ -0.99
CLN6-205ENST00000564846 MT2AP02795 61 aa8.82□□□□□ -1
CLN6-205ENST00000564846 KRTAP12-1P59990 96 aa8.81□□□□□ -1
CLN6-205ENST00000564846 KRTAP12-2P59991 146 aa8.79□□□□□ -1
CLN6-205ENST00000564846 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
CLN6-205ENST00000564846 MT1FP04733 61 aa8.77□□□□□ -1.01
CLN6-205ENST00000564846 KRTAP10-10P60014 251 aa8.77□□□□□ -1.01
CLN6-205ENST00000564846 LCE2AQ5TA79 106 aaPredicted RBP8.73□□□□□ -1.01
CLN6-205ENST00000564846 SPRR2GQ9BYE4 73 aa8.71□□□□□ -1.01
CLN6-205ENST00000564846 KRTAP19-1Q8IUB9 90 aa8.66□□□□□ -1.02
CLN6-205ENST00000564846 KTN1-AS1Q86SY8 53 aa8.63□□□□□ -1.03
CLN6-205ENST00000564846 ROMO1P60602 79 aa8.56□□□□□ -1.04
CLN6-205ENST00000564846 KRTAP9-3Q9BYQ3 159 aa8.52□□□□□ -1.05
CLN6-205ENST00000564846 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
CLN6-205ENST00000564846 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.05
CLN6-205ENST00000564846 PLAC4Q8WY50 150 aa8.46□□□□□ -1.05
CLN6-205ENST00000564846 PRAC1Q96KF2 57 aa8.37□□□□□ -1.07
CLN6-205ENST00000564846 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
CLN6-205ENST00000564846 MT1BP07438 61 aa8.33□□□□□ -1.08
CLN6-205ENST00000564846 LCE2BO14633 110 aa8.25□□□□□ -1.09
CLN6-205ENST00000564846 KRTAP25-1Q3LHN0 102 aa8.2□□□□□ -1.1
CLN6-205ENST00000564846 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
CLN6-205ENST00000564846 KRTAP9-6A0A140TA67 174 aa8.09□□□□□ -1.11
CLN6-205ENST00000564846 TNP1P09430 55 aa8.08□□□□□ -1.12
CLN6-205ENST00000564846 KRTAP10-5P60370 271 aa8.07□□□□□ -1.12
CLN6-205ENST00000564846 MT1XP80297 61 aa8.07□□□□□ -1.12
CLN6-205ENST00000564846 USH2AO75445 5202 aa8.04□□□□□ -1.12
CLN6-205ENST00000564846 PRO2289Q9P1D8 64 aa8.03□□□□□ -1.12
CLN6-205ENST00000564846 LCE2DQ5TA82 110 aaPredicted RBP7.92□□□□□ -1.14
CLN6-205ENST00000564846 PP632Q6XCG6 107 aa7.92□□□□□ -1.14
CLN6-205ENST00000564846 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
CLN6-205ENST00000564846 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
CLN6-205ENST00000564846 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
CLN6-205ENST00000564846 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
CLN6-205ENST00000564846 FSIP2Q5CZC0 6907 aa7.72□□□□□ -1.17
CLN6-205ENST00000564846 KRTAP10-12P60413 245 aa7.71□□□□□ -1.17
CLN6-205ENST00000564846 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
CLN6-205ENST00000564846 H3BS24 57 aa7.69□□□□□ -1.18
CLN6-205ENST00000564846 A0A0A0MQY5 61 aa7.67□□□□□ -1.18
CLN6-205ENST00000564846 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
CLN6-205ENST00000564846 KRTAP8-1Q8IUC2 63 aa7.56□□□□□ -1.2
CLN6-205ENST00000564846 KRTAP4-8A0A0G2JLE6 195 aa7.42□□□□□ -1.22
CLN6-205ENST00000564846 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
CLN6-205ENST00000564846 FCGBPQ9Y6R7 5405 aaPredicted RBP7.41□□□□□ -1.22
CLN6-205ENST00000564846 KRTAP12-3P60328 96 aa7.41□□□□□ -1.22
CLN6-205ENST00000564846 KMT2DO14686 5537 aa7.39□□□□□ -1.23
CLN6-205ENST00000564846 KRTAP19-5Q3LI72 72 aa7.33□□□□□ -1.24
CLN6-205ENST00000564846 KRTAP15-1Q3LI76 137 aa7.28□□□□□ -1.24
CLN6-205ENST00000564846 KRTAP9-7A8MTY7 169 aa7.21□□□□□ -1.25
CLN6-205ENST00000564846 KRTAP19-7Q3SYF9 63 aa7.21□□□□□ -1.25
CLN6-205ENST00000564846 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
CLN6-205ENST00000564846 MT1EP04732 61 aa7.08□□□□□ -1.28
CLN6-205ENST00000564846 MACF1Q9UPN3 7388 aaKnown RBP7.08□□□□□ -1.28
CLN6-205ENST00000564846 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
CLN6-205ENST00000564846 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
CLN6-205ENST00000564846 MT1LQ93083 61 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms