RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 BRK1Q8WUW1 75 aa12.79□□□□□ -0.36
LINC01003-201ENST00000564834 HMCN2Q8NDA2 5059 aa12.76□□□□□ -0.37
LINC01003-201ENST00000564834 RBM12B-AS1Q9P1G2 102 aa12.74□□□□□ -0.37
LINC01003-201ENST00000564834 A0A1B0GU69 56 aa12.69□□□□□ -0.38
LINC01003-201ENST00000564834 H1FX-AS1Q4G0G2 97 aa12.68□□□□□ -0.38
LINC01003-201ENST00000564834 MUC17Q685J3 4493 aa12.67□□□□□ -0.38
LINC01003-201ENST00000564834 S4R3F8 94 aa12.64□□□□□ -0.39
LINC01003-201ENST00000564834 LCA10Q71F78 164 aa12.64□□□□□ -0.39
LINC01003-201ENST00000564834 KRTAP4-1Q9BYQ7 146 aa12.61□□□□□ -0.39
LINC01003-201ENST00000564834 KRTAP3-3Q9BYR6 98 aa12.6□□□□□ -0.39
LINC01003-201ENST00000564834 SEC61GP60059 68 aa12.56□□□□□ -0.4
LINC01003-201ENST00000564834 A6NED7 52 aa12.54□□□□□ -0.4
LINC01003-201ENST00000564834 CDC42SE1Q9NRR8 79 aa12.43□□□□□ -0.42
LINC01003-201ENST00000564834 UQCR11O14957 56 aa12.36□□□□□ -0.43
LINC01003-201ENST00000564834 KRTAP19-2Q3LHN2 52 aa12.33□□□□□ -0.44
LINC01003-201ENST00000564834 CSAG1Q6PB30 78 aa12.33□□□□□ -0.44
LINC01003-201ENST00000564834 A8MU10 97 aa12.32□□□□□ -0.44
LINC01003-201ENST00000564834 MUC2Q02817 5179 aa12.26□□□□□ -0.45
LINC01003-201ENST00000564834 UBR4Q5T4S7 5183 aa12.26□□□□□ -0.45
LINC01003-201ENST00000564834 A0A1B0GU33 70 aa12.24□□□□□ -0.45
LINC01003-201ENST00000564834 MIR22HGQ0VDD5 57 aa12.23□□□□□ -0.45
LINC01003-201ENST00000564834 SPATA8Q6RVD6 105 aa12.23□□□□□ -0.45
LINC01003-201ENST00000564834 KRTAP10-6P60371 365 aaPredicted RBP12.21□□□□□ -0.45
LINC01003-201ENST00000564834 KRTAP3-2Q9BYR7 98 aa12.2□□□□□ -0.46
LINC01003-201ENST00000564834 FLGP20930 4061 aaPredicted RBP12.12□□□□□ -0.47
LINC01003-201ENST00000564834 PMAIP1Q13794 54 aa12.12□□□□□ -0.47
LINC01003-201ENST00000564834 ADM2Q7Z4H4 148 aa12.11□□□□□ -0.47
LINC01003-201ENST00000564834 H0YAA0 97 aa12.1□□□□□ -0.47
LINC01003-201ENST00000564834 P0C880 135 aa12.08□□□□□ -0.48
LINC01003-201ENST00000564834 RNF213Q63HN8 5207 aa12.07□□□□□ -0.48
LINC01003-201ENST00000564834 A6NN06 94 aa12□□□□□ -0.49
LINC01003-201ENST00000564834 LCE2CQ5TA81 110 aa11.95□□□□□ -0.5
LINC01003-201ENST00000564834 KRTAP13-4Q3LI77 160 aa11.91□□□□□ -0.5
LINC01003-201ENST00000564834 KTN1-AS1Q86SY8 53 aa11.83□□□□□ -0.52
LINC01003-201ENST00000564834 M0QZ58 72 aa11.79□□□□□ -0.52
LINC01003-201ENST00000564834 FAT4Q6V0I7 4981 aa11.75□□□□□ -0.53
LINC01003-201ENST00000564834 A0A0D9SG42 100 aa11.7□□□□□ -0.54
LINC01003-201ENST00000564834 MT1HP80294 61 aa11.69□□□□□ -0.54
LINC01003-201ENST00000564834 R4GN34 69 aa11.67□□□□□ -0.54
LINC01003-201ENST00000564834 K7ERS5 55 aa11.64□□□□□ -0.55
LINC01003-201ENST00000564834 LORP23490 312 aaPredicted RBP11.63□□□□□ -0.55
LINC01003-201ENST00000564834 M0R2T5 61 aa11.61□□□□□ -0.55
LINC01003-201ENST00000564834 KRTAP12-1P59990 96 aa11.48□□□□□ -0.57
LINC01003-201ENST00000564834 CRIPTQ9P021 101 aa11.48□□□□□ -0.57
LINC01003-201ENST00000564834 KRTAP12-2P59991 146 aa11.46□□□□□ -0.58
LINC01003-201ENST00000564834 LINC01554Q52M75 96 aa11.46□□□□□ -0.58
LINC01003-201ENST00000564834 SPINT4Q6UDR6 99 aa11.41□□□□□ -0.58
LINC01003-201ENST00000564834 KRTAP9-8Q9BYQ0 159 aa11.3□□□□□ -0.6
LINC01003-201ENST00000564834 MT2AP02795 61 aa11.28□□□□□ -0.6
LINC01003-201ENST00000564834 PRAC1Q96KF2 57 aa11.24□□□□□ -0.61
LINC01003-201ENST00000564834 MT1FP04733 61 aa11.23□□□□□ -0.61
LINC01003-201ENST00000564834 LCE2AQ5TA79 106 aaPredicted RBP11.23□□□□□ -0.61
LINC01003-201ENST00000564834 KRTAP10-10P60014 251 aa11.2□□□□□ -0.62
LINC01003-201ENST00000564834 ROMO1P60602 79 aa11.19□□□□□ -0.62
LINC01003-201ENST00000564834 SPRR2GQ9BYE4 73 aa11.19□□□□□ -0.62
LINC01003-201ENST00000564834 KRTAP19-1Q8IUB9 90 aa11.13□□□□□ -0.63
LINC01003-201ENST00000564834 CAMK2N1Q7Z7J9 78 aa10.95□□□□□ -0.66
LINC01003-201ENST00000564834 KRTAP25-1Q3LHN0 102 aa10.93□□□□□ -0.66
LINC01003-201ENST00000564834 KRTAP9-3Q9BYQ3 159 aa10.88□□□□□ -0.67
LINC01003-201ENST00000564834 PLAC4Q8WY50 150 aa10.86□□□□□ -0.67
LINC01003-201ENST00000564834 KRTAP19-8Q3LI54 63 aa10.85□□□□□ -0.67
LINC01003-201ENST00000564834 C10orf95Q9H7T3 257 aa10.84□□□□□ -0.67
LINC01003-201ENST00000564834 MT1BP07438 61 aa10.69□□□□□ -0.7
LINC01003-201ENST00000564834 LCE2BO14633 110 aa10.53□□□□□ -0.72
LINC01003-201ENST00000564834 TNP1P09430 55 aa10.47□□□□□ -0.73
LINC01003-201ENST00000564834 MT1XP80297 61 aa10.4□□□□□ -0.74
LINC01003-201ENST00000564834 KRTAP10-5P60370 271 aa10.39□□□□□ -0.75
LINC01003-201ENST00000564834 KRTAP9-2Q9BYQ4 174 aa10.34□□□□□ -0.75
LINC01003-201ENST00000564834 LCE2DQ5TA82 110 aaPredicted RBP10.3□□□□□ -0.76
LINC01003-201ENST00000564834 PP632Q6XCG6 107 aa10.3□□□□□ -0.76
LINC01003-201ENST00000564834 PRO2289Q9P1D8 64 aa10.26□□□□□ -0.77
LINC01003-201ENST00000564834 KRTAP23-1A1A580 65 aa10.23□□□□□ -0.77
LINC01003-201ENST00000564834 USH2AO75445 5202 aa10.22□□□□□ -0.77
LINC01003-201ENST00000564834 KRTAP10-7P60409 375 aaPredicted RBP10□□□□□ -0.81
LINC01003-201ENST00000564834 FSIP2Q5CZC0 6907 aa9.99□□□□□ -0.81
LINC01003-201ENST00000564834 LCE3AQ5TA76 89 aa9.98□□□□□ -0.81
LINC01003-201ENST00000564834 KRTAP10-12P60413 245 aa9.96□□□□□ -0.82
LINC01003-201ENST00000564834 SSPOA2VEC9 5147 aa9.94□□□□□ -0.82
LINC01003-201ENST00000564834 CRCT1Q9UGL9 99 aa9.85□□□□□ -0.83
LINC01003-201ENST00000564834 KRTAP19-6Q3LI70 58 aa9.83□□□□□ -0.84
LINC01003-201ENST00000564834 KRTAP15-1Q3LI76 137 aa9.82□□□□□ -0.84
LINC01003-201ENST00000564834 KRTAP9-6A0A140TA67 174 aa9.81□□□□□ -0.84
LINC01003-201ENST00000564834 KRTAP8-1Q8IUC2 63 aa9.79□□□□□ -0.84
LINC01003-201ENST00000564834 KRTAP12-3P60328 96 aa9.58□□□□□ -0.88
LINC01003-201ENST00000564834 FCGBPQ9Y6R7 5405 aaPredicted RBP9.57□□□□□ -0.88
LINC01003-201ENST00000564834 KRTAP4-8A0A0G2JLE6 195 aa9.53□□□□□ -0.88
LINC01003-201ENST00000564834 KRTAP4-8Q9BYQ9 185 aa9.53□□□□□ -0.88
LINC01003-201ENST00000564834 KMT2DO14686 5537 aa9.51□□□□□ -0.89
LINC01003-201ENST00000564834 KRTAP19-5Q3LI72 72 aa9.44□□□□□ -0.9
LINC01003-201ENST00000564834 NDUFAF8A1L188 74 aa9.27□□□□□ -0.92
LINC01003-201ENST00000564834 KRTAP19-7Q3SYF9 63 aa9.27□□□□□ -0.92
LINC01003-201ENST00000564834 H3BS24 57 aa9.27□□□□□ -0.93
LINC01003-201ENST00000564834 SPRR5A0A1B0GTR4 108 aa9.22□□□□□ -0.93
LINC01003-201ENST00000564834 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.14□□□□□ -0.95
LINC01003-201ENST00000564834 LUZP6Q538Z0 58 aa9.14□□□□□ -0.95
LINC01003-201ENST00000564834 MT1EP04732 61 aa9.09□□□□□ -0.95
LINC01003-201ENST00000564834 MACF1Q9UPN3 7388 aaKnown RBP9.09□□□□□ -0.95
LINC01003-201ENST00000564834 LCE3CQ5T5A8 94 aa8.96□□□□□ -0.97
LINC01003-201ENST00000564834 MT1LQ93083 61 aa8.95□□□□□ -0.98
LINC01003-201ENST00000564834 KRTAP19-4Q3LI73 84 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms