RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 OCR1Q9BZK8 76 aa5.75□□□□□ -1.49
GTF3C1-204ENST00000564664 MACF1Q9UPN3 7388 aaKnown RBP5.73□□□□□ -1.49
GTF3C1-204ENST00000564664 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
GTF3C1-204ENST00000564664 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
GTF3C1-204ENST00000564664 Q5W150 140 aa5.73□□□□□ -1.49
GTF3C1-204ENST00000564664 ATP5EP56381 51 aaPredicted RBP5.71□□□□□ -1.5
GTF3C1-204ENST00000564664 CASC2Q6XLA1 102 aa5.71□□□□□ -1.5
GTF3C1-204ENST00000564664 C20orf197Q8N268 126 aa5.7□□□□□ -1.5
GTF3C1-204ENST00000564664 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
GTF3C1-204ENST00000564664 H7BZZ5 65 aa5.69□□□□□ -1.5
GTF3C1-204ENST00000564664 HCG22E2RYF7 251 aa5.68□□□□□ -1.5
GTF3C1-204ENST00000564664 C5orf47Q569G3 176 aa5.68□□□□□ -1.5
GTF3C1-204ENST00000564664 CYSTM1Q9H1C7 97 aa5.67□□□□□ -1.5
GTF3C1-204ENST00000564664 H3BPC8 53 aa5.66□□□□□ -1.5
GTF3C1-204ENST00000564664 Q8N9L7 120 aa5.66□□□□□ -1.5
GTF3C1-204ENST00000564664 C4orf26Q17RF5 130 aa5.64□□□□□ -1.51
GTF3C1-204ENST00000564664 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
GTF3C1-204ENST00000564664 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
GTF3C1-204ENST00000564664 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
GTF3C1-204ENST00000564664 SERP1Q9Y6X1 66 aa5.61□□□□□ -1.51
GTF3C1-204ENST00000564664 CSAG1Q6PB30 78 aa5.59□□□□□ -1.51
GTF3C1-204ENST00000564664 TP53AIP1Q9HCN2 124 aa5.59□□□□□ -1.51
GTF3C1-204ENST00000564664 SNURFQ9Y675 71 aa5.58□□□□□ -1.52
GTF3C1-204ENST00000564664 MP68P56378 58 aa5.57□□□□□ -1.52
GTF3C1-204ENST00000564664 S4R3F8 94 aa5.57□□□□□ -1.52
GTF3C1-204ENST00000564664 C1orf64Q8NEQ6 169 aa5.56□□□□□ -1.52
GTF3C1-204ENST00000564664 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
GTF3C1-204ENST00000564664 SPANXA2-OT1Q8N9U9 137 aa5.54□□□□□ -1.52
GTF3C1-204ENST00000564664 CYP4F30PQ9H0H9 118 aa5.54□□□□□ -1.52
GTF3C1-204ENST00000564664 SMIM26A0A096LP01 95 aa5.51□□□□□ -1.53
GTF3C1-204ENST00000564664 Q5VV11 94 aa5.51□□□□□ -1.53
GTF3C1-204ENST00000564664 LCA10Q71F78 164 aa5.51□□□□□ -1.53
GTF3C1-204ENST00000564664 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
GTF3C1-204ENST00000564664 TRAV22A0A0B4J277 110 aa5.5□□□□□ -1.53
GTF3C1-204ENST00000564664 A6NN06 94 aa5.5□□□□□ -1.53
GTF3C1-204ENST00000564664 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
GTF3C1-204ENST00000564664 H0Y9P7 68 aa5.48□□□□□ -1.53
GTF3C1-204ENST00000564664 MT1BP07438 61 aa5.47□□□□□ -1.53
GTF3C1-204ENST00000564664 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
GTF3C1-204ENST00000564664 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
GTF3C1-204ENST00000564664 LINC00208Q96KT6 92 aa5.45□□□□□ -1.54
GTF3C1-204ENST00000564664 CRIPTQ9P021 101 aa5.44□□□□□ -1.54
GTF3C1-204ENST00000564664 LOC101927531A0A1B0GV80 90 aa5.4□□□□□ -1.54
GTF3C1-204ENST00000564664 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
GTF3C1-204ENST00000564664 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
GTF3C1-204ENST00000564664 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
GTF3C1-204ENST00000564664 Q1T7F1 81 aa5.37□□□□□ -1.55
GTF3C1-204ENST00000564664 V9GYY9 64 aa5.37□□□□□ -1.55
GTF3C1-204ENST00000564664 NEBP20929 6669 aa5.36□□□□□ -1.55
GTF3C1-204ENST00000564664 H0YAA0 97 aa5.33□□□□□ -1.56
GTF3C1-204ENST00000564664 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
GTF3C1-204ENST00000564664 A8MUN3 132 aa5.3□□□□□ -1.56
GTF3C1-204ENST00000564664 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
GTF3C1-204ENST00000564664 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
GTF3C1-204ENST00000564664 H3BS24 57 aa5.26□□□□□ -1.57
GTF3C1-204ENST00000564664 COA5Q86WW8 74 aa5.25□□□□□ -1.57
GTF3C1-204ENST00000564664 ACYP2P14621 99 aa5.24□□□□□ -1.57
GTF3C1-204ENST00000564664 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
GTF3C1-204ENST00000564664 KRTAP20-1Q3LI63 56 aa5.22□□□□□ -1.57
GTF3C1-204ENST00000564664 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
GTF3C1-204ENST00000564664 ADM2Q7Z4H4 148 aa5.21□□□□□ -1.58
GTF3C1-204ENST00000564664 PRO2289Q9P1D8 64 aa5.21□□□□□ -1.58
GTF3C1-204ENST00000564664 PRO0628Q9UI54 55 aa5.21□□□□□ -1.58
GTF3C1-204ENST00000564664 KMT2DO14686 5537 aa5.21□□□□□ -1.58
GTF3C1-204ENST00000564664 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
GTF3C1-204ENST00000564664 LINC01558Q9Y6Z2 57 aa5.2□□□□□ -1.58
GTF3C1-204ENST00000564664 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
GTF3C1-204ENST00000564664 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
GTF3C1-204ENST00000564664 R4GN34 69 aa5.12□□□□□ -1.59
GTF3C1-204ENST00000564664 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
GTF3C1-204ENST00000564664 MT1XP80297 61 aa5.1□□□□□ -1.59
GTF3C1-204ENST00000564664 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
GTF3C1-204ENST00000564664 PSPHP1O15172 72 aa5.08□□□□□ -1.6
GTF3C1-204ENST00000564664 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
GTF3C1-204ENST00000564664 CHKB-CPT1BH3BT56 60 aa5.07□□□□□ -1.6
GTF3C1-204ENST00000564664 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
GTF3C1-204ENST00000564664 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
GTF3C1-204ENST00000564664 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
GTF3C1-204ENST00000564664 PRR15LQ9BU68 103 aa5.06□□□□□ -1.6
GTF3C1-204ENST00000564664 P0C880 135 aa5.05□□□□□ -1.6
GTF3C1-204ENST00000564664 M0QZ58 72 aa5.04□□□□□ -1.6
GTF3C1-204ENST00000564664 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
GTF3C1-204ENST00000564664 SPTSSBQ8NFR3 76 aa5.04□□□□□ -1.6
GTF3C1-204ENST00000564664 SPRR2EP22531 72 aa5.03□□□□□ -1.6
GTF3C1-204ENST00000564664 SPRR2BP35325 72 aa5.03□□□□□ -1.6
GTF3C1-204ENST00000564664 SPRR2AP35326 72 aa5.03□□□□□ -1.6
GTF3C1-204ENST00000564664 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
GTF3C1-204ENST00000564664 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
GTF3C1-204ENST00000564664 A6NED7 52 aa4.98□□□□□ -1.61
GTF3C1-204ENST00000564664 A0A1B0GU69 56 aa4.97□□□□□ -1.61
GTF3C1-204ENST00000564664 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
GTF3C1-204ENST00000564664 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.62
GTF3C1-204ENST00000564664 LINC01554Q52M75 96 aa4.95□□□□□ -1.62
GTF3C1-204ENST00000564664 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
GTF3C1-204ENST00000564664 KRTAP2-1Q9BYU5 128 aa4.93□□□□□ -1.62
GTF3C1-204ENST00000564664 SPATA8Q6RVD6 105 aa4.92□□□□□ -1.62
GTF3C1-204ENST00000564664 UQCR11O14957 56 aa4.91□□□□□ -1.62
GTF3C1-204ENST00000564664 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
GTF3C1-204ENST00000564664 SEC61GP60059 68 aa4.9□□□□□ -1.63
GTF3C1-204ENST00000564664 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms