RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 S4R3F8 94 aa13.1□□□□□ -0.31
SH3GL3-205ENST00000563901 ATP5EP56381 51 aaPredicted RBP13.08□□□□□ -0.32
SH3GL3-205ENST00000563901 LCA10Q71F78 164 aa13.07□□□□□ -0.32
SH3GL3-205ENST00000563901 KRTAP10-6P60371 365 aaPredicted RBP13.02□□□□□ -0.33
SH3GL3-205ENST00000563901 KRTAP3-3Q9BYR6 98 aa12.98□□□□□ -0.33
SH3GL3-205ENST00000563901 LORP23490 312 aaPredicted RBP12.96□□□□□ -0.33
SH3GL3-205ENST00000563901 ACYP2P14621 99 aa12.91□□□□□ -0.34
SH3GL3-205ENST00000563901 CSAG1Q6PB30 78 aa12.85□□□□□ -0.35
SH3GL3-205ENST00000563901 KRTAP9-8Q9BYQ0 159 aa12.83□□□□□ -0.36
SH3GL3-205ENST00000563901 SERP1Q9Y6X1 66 aa12.78□□□□□ -0.36
SH3GL3-205ENST00000563901 COA5Q86WW8 74 aa12.76□□□□□ -0.37
SH3GL3-205ENST00000563901 MT2AP02795 61 aa12.75□□□□□ -0.37
SH3GL3-205ENST00000563901 CHKB-CPT1BH3BT56 60 aa12.72□□□□□ -0.37
SH3GL3-205ENST00000563901 MT1FP04733 61 aa12.68□□□□□ -0.38
SH3GL3-205ENST00000563901 RPS28P62857 69 aaKnown RBP12.65□□□□□ -0.38
SH3GL3-205ENST00000563901 KRTAP10-10P60014 251 aa12.59□□□□□ -0.39
SH3GL3-205ENST00000563901 SPTSSBQ8NFR3 76 aa12.53□□□□□ -0.4
SH3GL3-205ENST00000563901 ADM2Q7Z4H4 148 aa12.46□□□□□ -0.41
SH3GL3-205ENST00000563901 H0YAA0 97 aa12.44□□□□□ -0.42
SH3GL3-205ENST00000563901 SMIM26A0A096LP01 95 aa12.42□□□□□ -0.42
SH3GL3-205ENST00000563901 KRTAP9-3Q9BYQ3 159 aa12.38□□□□□ -0.43
SH3GL3-205ENST00000563901 KRTAP3-2Q9BYR7 98 aa12.36□□□□□ -0.43
SH3GL3-205ENST00000563901 P0C880 135 aa12.33□□□□□ -0.43
SH3GL3-205ENST00000563901 LCE2DQ5TA82 110 aaPredicted RBP12.31□□□□□ -0.44
SH3GL3-205ENST00000563901 KRTAP9-2Q9BYQ4 174 aa12.25□□□□□ -0.45
SH3GL3-205ENST00000563901 V9GYY9 64 aa12.22□□□□□ -0.45
SH3GL3-205ENST00000563901 Q1T7F1 81 aa12.22□□□□□ -0.45
SH3GL3-205ENST00000563901 LINC01558Q9Y6Z2 57 aa12.19□□□□□ -0.46
SH3GL3-205ENST00000563901 LCE2BO14633 110 aa12.19□□□□□ -0.46
SH3GL3-205ENST00000563901 KRTAP19-1Q8IUB9 90 aa12.19□□□□□ -0.46
SH3GL3-205ENST00000563901 CRIPTQ9P021 101 aa12.12□□□□□ -0.47
SH3GL3-205ENST00000563901 SPRR2GQ9BYE4 73 aa12.11□□□□□ -0.47
SH3GL3-205ENST00000563901 A0A1B0GU69 56 aa12.08□□□□□ -0.48
SH3GL3-205ENST00000563901 SEC61GP60059 68 aa12.08□□□□□ -0.48
SH3GL3-205ENST00000563901 PRR15LQ9BU68 103 aa12.06□□□□□ -0.48
SH3GL3-205ENST00000563901 R4GN34 69 aa12.03□□□□□ -0.48
SH3GL3-205ENST00000563901 M0QZ58 72 aa12.01□□□□□ -0.49
SH3GL3-205ENST00000563901 PSPHP1O15172 72 aa12□□□□□ -0.49
SH3GL3-205ENST00000563901 USH2AO75445 5202 aa11.98□□□□□ -0.49
SH3GL3-205ENST00000563901 FSIP2Q5CZC0 6907 aa11.93□□□□□ -0.5
SH3GL3-205ENST00000563901 KRTAP19-8Q3LI54 63 aa11.89□□□□□ -0.51
SH3GL3-205ENST00000563901 KRTAP13-4Q3LI77 160 aa11.89□□□□□ -0.51
SH3GL3-205ENST00000563901 Q5VV11 94 aa11.89□□□□□ -0.51
SH3GL3-205ENST00000563901 MT1BP07438 61 aa11.84□□□□□ -0.51
SH3GL3-205ENST00000563901 LINC01554Q52M75 96 aa11.84□□□□□ -0.51
SH3GL3-205ENST00000563901 A0A1B0GU33 70 aa11.83□□□□□ -0.52
SH3GL3-205ENST00000563901 SPATA8Q6RVD6 105 aa11.76□□□□□ -0.53
SH3GL3-205ENST00000563901 SSPOA2VEC9 5147 aa11.71□□□□□ -0.53
SH3GL3-205ENST00000563901 CRCT1Q9UGL9 99 aa11.69□□□□□ -0.54
SH3GL3-205ENST00000563901 UQCR11O14957 56 aa11.68□□□□□ -0.54
SH3GL3-205ENST00000563901 A6NED7 52 aa11.67□□□□□ -0.54
SH3GL3-205ENST00000563901 A0A0D9SG42 100 aa11.6□□□□□ -0.55
SH3GL3-205ENST00000563901 PLAC4Q8WY50 150 aa11.54□□□□□ -0.56
SH3GL3-205ENST00000563901 MIR22HGQ0VDD5 57 aa11.53□□□□□ -0.56
SH3GL3-205ENST00000563901 KRTAP19-6Q3LI70 58 aa11.53□□□□□ -0.56
SH3GL3-205ENST00000563901 KRTAP9-6A0A140TA67 174 aa11.53□□□□□ -0.56
SH3GL3-205ENST00000563901 A8MU10 97 aa11.52□□□□□ -0.57
SH3GL3-205ENST00000563901 A6NN06 94 aa11.47□□□□□ -0.57
SH3GL3-205ENST00000563901 CDC42SE1Q9NRR8 79 aa11.42□□□□□ -0.58
SH3GL3-205ENST00000563901 BRK1Q8WUW1 75 aa11.4□□□□□ -0.58
SH3GL3-205ENST00000563901 KRTAP12-1P59990 96 aa11.35□□□□□ -0.59
SH3GL3-205ENST00000563901 KRTAP10-5P60370 271 aa11.35□□□□□ -0.59
SH3GL3-205ENST00000563901 SPINT4Q6UDR6 99 aa11.35□□□□□ -0.59
SH3GL3-205ENST00000563901 KRTAP12-2P59991 146 aa11.32□□□□□ -0.6
SH3GL3-205ENST00000563901 FCGBPQ9Y6R7 5405 aaPredicted RBP11.32□□□□□ -0.6
SH3GL3-205ENST00000563901 MT1XP80297 61 aa11.31□□□□□ -0.6
SH3GL3-205ENST00000563901 CAMK2N1Q7Z7J9 78 aa11.2□□□□□ -0.62
SH3GL3-205ENST00000563901 PRO2289Q9P1D8 64 aa11.17□□□□□ -0.62
SH3GL3-205ENST00000563901 K7ERS5 55 aa11.08□□□□□ -0.64
SH3GL3-205ENST00000563901 PRO0628Q9UI54 55 aa11.04□□□□□ -0.64
SH3GL3-205ENST00000563901 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.87□□□□□ -0.67
SH3GL3-205ENST00000563901 MACF1Q9UPN3 7388 aaKnown RBP10.86□□□□□ -0.67
SH3GL3-205ENST00000563901 KRTAP10-7P60409 375 aaPredicted RBP10.85□□□□□ -0.67
SH3GL3-205ENST00000563901 C10orf95Q9H7T3 257 aa10.8□□□□□ -0.68
SH3GL3-205ENST00000563901 PMAIP1Q13794 54 aa10.77□□□□□ -0.68
SH3GL3-205ENST00000563901 KRTAP10-12P60413 245 aa10.7□□□□□ -0.7
SH3GL3-205ENST00000563901 KMT2DO14686 5537 aa10.66□□□□□ -0.7
SH3GL3-205ENST00000563901 SYNE2Q8WXH0 6885 aaKnown RBP10.62□□□□□ -0.71
SH3GL3-205ENST00000563901 KRTAP4-8A0A0G2JLE6 195 aa10.62□□□□□ -0.71
SH3GL3-205ENST00000563901 KRTAP4-8Q9BYQ9 185 aa10.62□□□□□ -0.71
SH3GL3-205ENST00000563901 ROMO1P60602 79 aa10.55□□□□□ -0.72
SH3GL3-205ENST00000563901 TNP1P09430 55 aa10.51□□□□□ -0.73
SH3GL3-205ENST00000563901 KRTAP9-7A8MTY7 169 aa10.47□□□□□ -0.73
SH3GL3-205ENST00000563901 KRTAP8-1Q8IUC2 63 aa10.43□□□□□ -0.74
SH3GL3-205ENST00000563901 KRTAP6-3Q3LI67 103 aa10.37□□□□□ -0.75
SH3GL3-205ENST00000563901 KRTAP25-1Q3LHN0 102 aa10.31□□□□□ -0.76
SH3GL3-205ENST00000563901 LCE3AQ5TA76 89 aa10.28□□□□□ -0.76
SH3GL3-205ENST00000563901 KTN1-AS1Q86SY8 53 aa10.27□□□□□ -0.77
SH3GL3-205ENST00000563901 KRTAP5-9P26371 169 aa10.26□□□□□ -0.77
SH3GL3-205ENST00000563901 SPRR2FQ96RM1 72 aa10.23□□□□□ -0.77
SH3GL3-205ENST00000563901 KRTAP19-7Q3SYF9 63 aa10.1□□□□□ -0.79
SH3GL3-205ENST00000563901 KRTAP19-5Q3LI72 72 aa10.08□□□□□ -0.8
SH3GL3-205ENST00000563901 PRAC1Q96KF2 57 aa10.08□□□□□ -0.8
SH3GL3-205ENST00000563901 MUC12Q9UKN1 5478 aa10.06□□□□□ -0.8
SH3GL3-205ENST00000563901 MT1EP04732 61 aa9.95□□□□□ -0.82
SH3GL3-205ENST00000563901 KRTAP23-1A1A580 65 aa9.9□□□□□ -0.82
SH3GL3-205ENST00000563901 MDN1Q9NU22 5596 aa9.89□□□□□ -0.83
SH3GL3-205ENST00000563901 SPRR2EP22531 72 aa9.86□□□□□ -0.83
SH3GL3-205ENST00000563901 SPRR2BP35325 72 aa9.86□□□□□ -0.83
SH3GL3-205ENST00000563901 SPRR2AP35326 72 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms